RNA–Protein interactions for RNA: ENST00000564584.1

CTU2-205, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 3

Gene CTU2, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-205ENST00000564584 C1QTNF8P60827 252 aa19.12■□□□□ 0.65
CTU2-205ENST00000564584 SLC27A3Q5K4L6 730 aa19.12■□□□□ 0.65
CTU2-205ENST00000564584 MYOM1P52179 1685 aa19.11■□□□□ 0.65
CTU2-205ENST00000564584 ZNF827Q17R98 1081 aa19.11■□□□□ 0.65
CTU2-205ENST00000564584 SYTL4Q96C24 671 aaPredicted RBP19.11■□□□□ 0.65
CTU2-205ENST00000564584 SGIP1Q9BQI5 828 aa19.11■□□□□ 0.65
CTU2-205ENST00000564584 PANK3Q9H999 370 aa19.11■□□□□ 0.65
CTU2-205ENST00000564584 CASZ1Q86V15 1759 aa19.11■□□□□ 0.65
CTU2-205ENST00000564584 NBPF6Q5VWK0 638 aa19.1■□□□□ 0.65
CTU2-205ENST00000564584 NBPF4Q96M43 638 aa19.1■□□□□ 0.65
CTU2-205ENST00000564584 SYT17Q9BSW7 474 aa19.1■□□□□ 0.65
CTU2-205ENST00000564584 FHDC1Q9C0D6 1143 aaPredicted RBP19.1■□□□□ 0.65
CTU2-205ENST00000564584 LTN1O94822 1766 aa19.1■□□□□ 0.65
CTU2-205ENST00000564584 NHSQ6T4R5 1651 aa19.1■□□□□ 0.65
CTU2-205ENST00000564584 AKT1S1Q96B36 256 aa19.09■□□□□ 0.65
CTU2-205ENST00000564584 RTL1A6NKG5 1358 aa19.08■□□□□ 0.65
CTU2-205ENST00000564584 ARXQ96QS3 562 aa19.08■□□□□ 0.64
CTU2-205ENST00000564584 KNSTRNQ9Y448 316 aa19.08■□□□□ 0.64
CTU2-205ENST00000564584 CGNL1Q0VF96 1302 aa19.06■□□□□ 0.64
CTU2-205ENST00000564584 HSP90AB2PQ58FF8 381 aa19.06■□□□□ 0.64
CTU2-205ENST00000564584 USHBP1Q8N6Y0 703 aa19.06■□□□□ 0.64
CTU2-205ENST00000564584 RAPGEF4Q8WZA2 1011 aa19.06■□□□□ 0.64
CTU2-205ENST00000564584 KCNQ4P56696 695 aa19.05■□□□□ 0.64
CTU2-205ENST00000564584 SLC16A10Q8TF71 515 aa19.05■□□□□ 0.64
CTU2-205ENST00000564584 CARD14Q9BXL6 1004 aa19.05■□□□□ 0.64
CTU2-205ENST00000564584 NSD3Q9BZ95 1437 aa19.05■□□□□ 0.64
CTU2-205ENST00000564584 TATP17735 454 aaPredicted RBP19.04■□□□□ 0.64
CTU2-205ENST00000564584 TFCP2L1Q9NZI6 479 aa19.04■□□□□ 0.64
CTU2-205ENST00000564584 MEGF6O75095 1541 aa19.04■□□□□ 0.64
CTU2-205ENST00000564584 INSRP06213 1382 aa19.04■□□□□ 0.64
CTU2-205ENST00000564584 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
CTU2-205ENST00000564584 CCNL1Q9UK58 526 aaPredicted RBP19.02■□□□□ 0.64
CTU2-205ENST00000564584 NSD2O96028 1365 aa19.02■□□□□ 0.64
CTU2-205ENST00000564584 PNPLA7Q6ZV29 1317 aa19.01■□□□□ 0.63
CTU2-205ENST00000564584 PAPPAQ13219 1627 aa19.01■□□□□ 0.63
CTU2-205ENST00000564584 DDX10Q13206 875 aaKnown RBP19.01■□□□□ 0.63
CTU2-205ENST00000564584 FLT4P35916 1363 aa19.01■□□□□ 0.63
CTU2-205ENST00000564584 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
CTU2-205ENST00000564584 BTAF1O14981 1849 aa19■□□□□ 0.63
CTU2-205ENST00000564584 PER1O15534 1290 aaPredicted RBP19■□□□□ 0.63
CTU2-205ENST00000564584 POLD1P28340 1107 aa19■□□□□ 0.63
CTU2-205ENST00000564584 FAM208AQ9UK61 1670 aaKnown RBP19■□□□□ 0.63
CTU2-205ENST00000564584 MAP3K5Q99683 1374 aa18.99■□□□□ 0.63
CTU2-205ENST00000564584 NPC1L1Q9UHC9 1359 aa18.99■□□□□ 0.63
CTU2-205ENST00000564584 EMILIN1Q9Y6C2 1016 aa18.99■□□□□ 0.63
CTU2-205ENST00000564584 CEP350Q5VT06 3117 aa18.98■□□□□ 0.63
CTU2-205ENST00000564584 PCDH11XQ9BZA7 1347 aa18.98■□□□□ 0.63
CTU2-205ENST00000564584 PCDH11YQ9BZA8 1340 aa18.98■□□□□ 0.63
CTU2-205ENST00000564584 PPM1GO15355 546 aaPredicted RBP18.97■□□□□ 0.63
CTU2-205ENST00000564584 CYP27B1O15528 508 aa18.95■□□□□ 0.62
CTU2-205ENST00000564584 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
CTU2-205ENST00000564584 AMER1Q5JTC6 1135 aaPredicted RBP18.95■□□□□ 0.62
CTU2-205ENST00000564584 MPRIPQ6WCQ1 1025 aa18.95■□□□□ 0.62
CTU2-205ENST00000564584 MSH5O43196 834 aa18.94■□□□□ 0.62
CTU2-205ENST00000564584 GPR162Q16538 588 aa18.94■□□□□ 0.62
CTU2-205ENST00000564584 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
CTU2-205ENST00000564584 COL23A1Q86Y22 540 aaPredicted RBP18.93■□□□□ 0.62
CTU2-205ENST00000564584 GIGYF1O75420 1035 aaPredicted RBP18.92■□□□□ 0.62
CTU2-205ENST00000564584 MORC1Q86VD1 984 aa18.92■□□□□ 0.62
CTU2-205ENST00000564584 KAT6BQ8WYB5 2073 aa18.92■□□□□ 0.62
CTU2-205ENST00000564584 KIF20BQ96Q89 1820 aa18.92■□□□□ 0.62
CTU2-205ENST00000564584 SMARCC1Q92922 1105 aaPredicted RBP18.91■□□□□ 0.62
CTU2-205ENST00000564584 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
CTU2-205ENST00000564584 NKX1-1Q15270 411 aaPredicted RBP18.9■□□□□ 0.62
CTU2-205ENST00000564584 EYA1Q99502 592 aa18.9■□□□□ 0.62
CTU2-205ENST00000564584 POLKQ9UBT6 870 aa18.9■□□□□ 0.62
CTU2-205ENST00000564584 PALLDQ8WX93 1383 aa18.9■□□□□ 0.62
CTU2-205ENST00000564584 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
CTU2-205ENST00000564584 FLAD1Q8NFF5 587 aa18.89■□□□□ 0.61
CTU2-205ENST00000564584 PIGBQ92521 554 aa18.89■□□□□ 0.61
CTU2-205ENST00000564584 DOT1LQ8TEK3 1739 aa18.88■□□□□ 0.61
CTU2-205ENST00000564584 CC2D1BQ5T0F9 858 aaKnown RBP18.88■□□□□ 0.61
CTU2-205ENST00000564584 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
CTU2-205ENST00000564584 NLGN2Q8NFZ4 835 aa18.88■□□□□ 0.61
CTU2-205ENST00000564584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.88■□□□□ 0.61
CTU2-205ENST00000564584 SHANK3Q9BYB0 1731 aa18.87■□□□□ 0.61
CTU2-205ENST00000564584 ANKRD26Q9UPS8 1709 aa18.86■□□□□ 0.61
CTU2-205ENST00000564584 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
CTU2-205ENST00000564584 TNNT2P45379 298 aaPredicted RBP18.86■□□□□ 0.61
CTU2-205ENST00000564584 RALBP1Q15311 655 aa18.86■□□□□ 0.61
CTU2-205ENST00000564584 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
CTU2-205ENST00000564584 LY75O60449 1722 aa18.84■□□□□ 0.61
CTU2-205ENST00000564584 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
CTU2-205ENST00000564584 IFNL2Q8IZJ0 200 aa18.84■□□□□ 0.61
CTU2-205ENST00000564584 AK7Q96M32 723 aa18.84■□□□□ 0.61
CTU2-205ENST00000564584 PHKG2P15735 406 aa18.83■□□□□ 0.6
CTU2-205ENST00000564584 TMOD3Q9NYL9 352 aa18.83■□□□□ 0.6
CTU2-205ENST00000564584 GOLGB1Q14789 3259 aaKnown RBP18.82■□□□□ 0.6
CTU2-205ENST00000564584 QSER1Q2KHR3 1735 aa18.82■□□□□ 0.6
CTU2-205ENST00000564584 LOC102724428A0A0B4J2F2 783 aa18.81■□□□□ 0.6
CTU2-205ENST00000564584 GRIN3BO60391 1043 aa18.81■□□□□ 0.6
CTU2-205ENST00000564584 SIK1P57059 783 aa18.81■□□□□ 0.6
CTU2-205ENST00000564584 CD2APQ9Y5K6 639 aa18.81■□□□□ 0.6
CTU2-205ENST00000564584 ANP32CO43423 234 aa18.8■□□□□ 0.6
CTU2-205ENST00000564584 AMIGO3Q86WK7 504 aa18.8■□□□□ 0.6
CTU2-205ENST00000564584 ASAP1Q9ULH1 1129 aa18.8■□□□□ 0.6
CTU2-205ENST00000564584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.79■□□□□ 0.6
CTU2-205ENST00000564584 PHF14O94880 888 aa18.79■□□□□ 0.6
CTU2-205ENST00000564584 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.65e-7■□□□□ 9.2
CTU2-205ENST00000564584 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms