RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 ZNF395Q9H8N7 513 aaPredicted RBP10.43□□□□□ -0.74
UBR1-205ENST00000564540 ADH1AP07327 375 aa10.42□□□□□ -0.74
UBR1-205ENST00000564540 ERVK-9P63128 1117 aa10.42□□□□□ -0.74
UBR1-205ENST00000564540 WWC1Q8IX03 1113 aa10.42□□□□□ -0.74
UBR1-205ENST00000564540 PHTF2Q8N3S3 785 aa10.42□□□□□ -0.74
UBR1-205ENST00000564540 SLFNL1Q499Z3 407 aa10.41□□□□□ -0.74
UBR1-205ENST00000564540 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
UBR1-205ENST00000564540 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.74
UBR1-205ENST00000564540 SPINT1O43278 529 aa10.4□□□□□ -0.74
UBR1-205ENST00000564540 CC2D2BQ6DHV5 1058 aa10.4□□□□□ -0.74
UBR1-205ENST00000564540 RNF135Q8IUD6 432 aa10.4□□□□□ -0.74
UBR1-205ENST00000564540 INSM2Q96T92 566 aaPredicted RBP10.4□□□□□ -0.74
UBR1-205ENST00000564540 ALG2Q9H553 416 aa10.4□□□□□ -0.74
UBR1-205ENST00000564540 MAN1A2O60476 641 aa10.39□□□□□ -0.75
UBR1-205ENST00000564540 SOX11P35716 441 aa10.39□□□□□ -0.75
UBR1-205ENST00000564540 PIK3CDO00329 1044 aa10.38□□□□□ -0.75
UBR1-205ENST00000564540 PTGIRP43119 386 aa10.38□□□□□ -0.75
UBR1-205ENST00000564540 CTSOP43234 321 aaPredicted RBP10.38□□□□□ -0.75
UBR1-205ENST00000564540 PROSER2Q86WR7 435 aaPredicted RBP10.38□□□□□ -0.75
UBR1-205ENST00000564540 ADAMTS19Q8TE59 1207 aa10.38□□□□□ -0.75
UBR1-205ENST00000564540 DNMT3LQ9UJW3 386 aa10.38□□□□□ -0.75
UBR1-205ENST00000564540 DOLKQ9UPQ8 538 aa10.38□□□□□ -0.75
UBR1-205ENST00000564540 FIGNL2A6NMB9 653 aa10.37□□□□□ -0.75
UBR1-205ENST00000564540 TTLL8A6PVC2 850 aa10.37□□□□□ -0.75
UBR1-205ENST00000564540 FNBP4Q8N3X1 1017 aaPredicted RBP10.37□□□□□ -0.75
UBR1-205ENST00000564540 OSBPL3Q9H4L5 887 aa10.37□□□□□ -0.75
UBR1-205ENST00000564540 ATP5J2-PTCD1G3V325 749 aa10.36□□□□□ -0.75
UBR1-205ENST00000564540 KCTD17Q8N5Z5 321 aa10.36□□□□□ -0.75
UBR1-205ENST00000564540 POLMQ9NP87 494 aaPredicted RBP10.36□□□□□ -0.75
UBR1-205ENST00000564540 CHIC2Q9UKJ5 165 aa10.36□□□□□ -0.75
UBR1-205ENST00000564540 TRAK2O60296 914 aa10.35□□□□□ -0.75
UBR1-205ENST00000564540 TRIM52Q96A61 297 aa10.35□□□□□ -0.75
UBR1-205ENST00000564540 OXLD1Q5BKU9 147 aa10.34□□□□□ -0.75
UBR1-205ENST00000564540 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
UBR1-205ENST00000564540 PLPP7Q8NBV4 271 aa10.34□□□□□ -0.75
UBR1-205ENST00000564540 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
UBR1-205ENST00000564540 A0A1W2PRU2 124 aa10.33□□□□□ -0.76
UBR1-205ENST00000564540 MYCP01106 439 aaPredicted RBP10.33□□□□□ -0.76
UBR1-205ENST00000564540 CYP2U1Q7Z449 544 aa10.33□□□□□ -0.76
UBR1-205ENST00000564540 A6NJR5 290 aa10.32□□□□□ -0.76
UBR1-205ENST00000564540 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
UBR1-205ENST00000564540 RNF217Q8TC41 542 aa10.32□□□□□ -0.76
UBR1-205ENST00000564540 ARHGEF10LQ9HCE6 1279 aa10.32□□□□□ -0.76
UBR1-205ENST00000564540 MEN1O00255 615 aa10.31□□□□□ -0.76
UBR1-205ENST00000564540 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
UBR1-205ENST00000564540 STAU1O95793 577 aaKnown RBP10.3□□□□□ -0.76
UBR1-205ENST00000564540 SKIP12755 728 aa10.3□□□□□ -0.76
UBR1-205ENST00000564540 USP4Q13107 963 aa10.3□□□□□ -0.76
UBR1-205ENST00000564540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.76
UBR1-205ENST00000564540 MAP7D1Q3KQU3 841 aa10.3□□□□□ -0.76
UBR1-205ENST00000564540 TMEM151AQ8N4L1 468 aa10.3□□□□□ -0.76
UBR1-205ENST00000564540 UCN2Q96RP3 112 aa10.29□□□□□ -0.76
UBR1-205ENST00000564540 GTF3C3Q9Y5Q9 886 aa10.29□□□□□ -0.76
UBR1-205ENST00000564540 GLMNQ92990 594 aa10.28□□□□□ -0.76
UBR1-205ENST00000564540 RASSF7Q02833 373 aa10.27□□□□□ -0.77
UBR1-205ENST00000564540 PTSQ03393 145 aa10.27□□□□□ -0.77
UBR1-205ENST00000564540 CLN3Q13286 438 aa10.27□□□□□ -0.77
UBR1-205ENST00000564540 DEPDC4Q8N2C3 294 aa10.27□□□□□ -0.77
UBR1-205ENST00000564540 GDF11O95390 407 aa10.26□□□□□ -0.77
UBR1-205ENST00000564540 GNRH1P01148 92 aa10.26□□□□□ -0.77
UBR1-205ENST00000564540 RNF144AP50876 292 aaPredicted RBP10.26□□□□□ -0.77
UBR1-205ENST00000564540 TBC1D9Q6ZT07 1266 aa10.26□□□□□ -0.77
UBR1-205ENST00000564540 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
UBR1-205ENST00000564540 NLRP3Q96P20 1036 aa10.26□□□□□ -0.77
UBR1-205ENST00000564540 IL2RAP01589 272 aa10.25□□□□□ -0.77
UBR1-205ENST00000564540 PRICKLE2Q7Z3G6 844 aa10.25□□□□□ -0.77
UBR1-205ENST00000564540 CNKSR1Q969H4 720 aa10.25□□□□□ -0.77
UBR1-205ENST00000564540 USP17L5A8MUK1 530 aa10.24□□□□□ -0.77
UBR1-205ENST00000564540 NCOA4Q13772 614 aa10.24□□□□□ -0.77
UBR1-205ENST00000564540 LYSMD3Q7Z3D4 306 aa10.24□□□□□ -0.77
UBR1-205ENST00000564540 SIRT1Q96EB6 747 aa10.24□□□□□ -0.77
UBR1-205ENST00000564540 RNF225M0QZC1 329 aaPredicted RBP10.23□□□□□ -0.77
UBR1-205ENST00000564540 PPFIA3O75145 1194 aa10.23□□□□□ -0.77
UBR1-205ENST00000564540 EML3Q32P44 896 aa10.23□□□□□ -0.77
UBR1-205ENST00000564540 ESYT1Q9BSJ8 1104 aa10.23□□□□□ -0.77
UBR1-205ENST00000564540 ETNK1Q9HBU6 452 aa10.23□□□□□ -0.77
UBR1-205ENST00000564540 ZNF777Q9ULD5 760 aaPredicted RBP10.23□□□□□ -0.77
UBR1-205ENST00000564540 RHOQP17081 205 aa10.22□□□□□ -0.77
UBR1-205ENST00000564540 GPC1P35052 558 aa10.22□□□□□ -0.77
UBR1-205ENST00000564540 SLC27A3Q5K4L6 730 aa10.22□□□□□ -0.77
UBR1-205ENST00000564540 CALR3Q96L12 384 aaKnown RBP10.22□□□□□ -0.77
UBR1-205ENST00000564540 SENP3-EIF4A1A0A087X0R7 540 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 ATP9BO43861 1147 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 SCNN1DP51172 638 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 CENPCQ03188 943 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 CCDC155Q8N6L0 562 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 XAGE2Q96GT9 111 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 GRIP2Q9C0E4 1043 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 HRH3Q9Y5N1 445 aa10.21□□□□□ -0.77
UBR1-205ENST00000564540 SLC35F4A4IF30 521 aa10.2□□□□□ -0.78
UBR1-205ENST00000564540 USP17L3A6NCW0 530 aa10.2□□□□□ -0.78
UBR1-205ENST00000564540 USP17L4A6NCW7 530 aa10.2□□□□□ -0.78
UBR1-205ENST00000564540 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
UBR1-205ENST00000564540 USP17L1Q7RTZ2 530 aa10.2□□□□□ -0.78
UBR1-205ENST00000564540 ADAMTS8Q9UP79 889 aa10.2□□□□□ -0.78
UBR1-205ENST00000564540 PCDHGA11Q9Y5H2 935 aa10.2□□□□□ -0.78
UBR1-205ENST00000564540 GDF10P55107 478 aa10.19□□□□□ -0.78
UBR1-205ENST00000564540 POU4F2Q12837 409 aa10.19□□□□□ -0.78
UBR1-205ENST00000564540 ESCO1Q5FWF5 840 aa10.19□□□□□ -0.78
UBR1-205ENST00000564540 TFIP11Q9UBB9 837 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 934 ms