RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 COL3A1P02461 1466 aaPredicted RBP23.07■■□□□ 1.28
CPNE7-207ENST00000564421 FAM182BQ5T319 152 aa23.07■■□□□ 1.28
CPNE7-207ENST00000564421 RAPGEF4Q8WZA2 1011 aa23.07■■□□□ 1.28
CPNE7-207ENST00000564421 TNS1Q9HBL0 1735 aaKnown RBP23.07■■□□□ 1.28
CPNE7-207ENST00000564421 KAT6BQ8WYB5 2073 aa23.07■■□□□ 1.28
CPNE7-207ENST00000564421 IL13P35225 146 aa23.06■■□□□ 1.28
CPNE7-207ENST00000564421 MARCH10Q8NA82 808 aaPredicted RBP23.06■■□□□ 1.28
CPNE7-207ENST00000564421 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
CPNE7-207ENST00000564421 TATP17735 454 aaPredicted RBP23.05■■□□□ 1.28
CPNE7-207ENST00000564421 DIAPH1O60610 1272 aaKnown RBP23.03■■□□□ 1.28
CPNE7-207ENST00000564421 ZCRB1Q8TBF4 217 aaKnown RBP23.02■■□□□ 1.28
CPNE7-207ENST00000564421 CFAP53Q96M91 514 aa23.02■■□□□ 1.28
CPNE7-207ENST00000564421 KDRP35968 1356 aa23.01■■□□□ 1.27
CPNE7-207ENST00000564421 NHSQ6T4R5 1651 aa23■■□□□ 1.27
CPNE7-207ENST00000564421 CCER2I3L3R5 266 aa22.98■■□□□ 1.27
CPNE7-207ENST00000564421 SF3B2Q13435 895 aaKnown RBP22.98■■□□□ 1.27
CPNE7-207ENST00000564421 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.98■■□□□ 1.27
CPNE7-207ENST00000564421 DOT1LQ8TEK3 1739 aa22.97■■□□□ 1.27
CPNE7-207ENST00000564421 PCDH11XQ9BZA7 1347 aa22.97■■□□□ 1.27
CPNE7-207ENST00000564421 PCDH11YQ9BZA8 1340 aa22.97■■□□□ 1.27
CPNE7-207ENST00000564421 TRIM37O94972 964 aa22.96■■□□□ 1.27
CPNE7-207ENST00000564421 SULT6B1Q6IMI4 303 aa22.96■■□□□ 1.27
CPNE7-207ENST00000564421 DDX54Q8TDD1 881 aaKnown RBP22.96■■□□□ 1.27
CPNE7-207ENST00000564421 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
CPNE7-207ENST00000564421 RGPD3A6NKT7 1758 aaPredicted RBP22.95■■□□□ 1.26
CPNE7-207ENST00000564421 RGPD4Q7Z3J3 1758 aa22.95■■□□□ 1.26
CPNE7-207ENST00000564421 AEBP1Q8IUX7 1158 aa22.95■■□□□ 1.26
CPNE7-207ENST00000564421 MRS2Q9HD23 443 aa22.95■■□□□ 1.26
CPNE7-207ENST00000564421 CCDC184Q52MB2 194 aa22.94■■□□□ 1.26
CPNE7-207ENST00000564421 VIRMAQ69YN4 1812 aaKnown RBP22.93■■□□□ 1.26
CPNE7-207ENST00000564421 BTAF1O14981 1849 aa22.92■■□□□ 1.26
CPNE7-207ENST00000564421 ITGB4P16144 1822 aa22.92■■□□□ 1.26
CPNE7-207ENST00000564421 BAG6P46379 1132 aa22.92■■□□□ 1.26
CPNE7-207ENST00000564421 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
CPNE7-207ENST00000564421 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
CPNE7-207ENST00000564421 CYP27B1O15528 508 aa22.91■■□□□ 1.26
CPNE7-207ENST00000564421 AMOTQ4VCS5 1084 aa22.91■■□□□ 1.26
CPNE7-207ENST00000564421 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
CPNE7-207ENST00000564421 U2SURPO15042 1029 aaKnown RBP22.9■■□□□ 1.26
CPNE7-207ENST00000564421 PLEKHO1Q53GL0 409 aaPredicted RBP22.9■■□□□ 1.26
CPNE7-207ENST00000564421 HMOX1P09601 288 aa22.89■■□□□ 1.25
CPNE7-207ENST00000564421 NKX1-1Q15270 411 aaPredicted RBP22.88■■□□□ 1.25
CPNE7-207ENST00000564421 DEFB132Q7Z7B7 95 aa22.88■■□□□ 1.25
CPNE7-207ENST00000564421 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
CPNE7-207ENST00000564421 RREB1Q92766 1687 aa22.87■■□□□ 1.25
CPNE7-207ENST00000564421 APBA3O96018 575 aa22.87■■□□□ 1.25
CPNE7-207ENST00000564421 ACSBG1Q96GR2 724 aa22.87■■□□□ 1.25
CPNE7-207ENST00000564421 PHKG2P15735 406 aa22.86■■□□□ 1.25
CPNE7-207ENST00000564421 SCN11AQ9UI33 1791 aa22.86■■□□□ 1.25
CPNE7-207ENST00000564421 KCNQ2O43526 872 aa22.85■■□□□ 1.25
CPNE7-207ENST00000564421 PLSCR1O15162 318 aa22.84■■□□□ 1.25
CPNE7-207ENST00000564421 EN1Q05925 392 aaPredicted RBP22.84■■□□□ 1.25
CPNE7-207ENST00000564421 PTF1AQ7RTS3 328 aa22.84■■□□□ 1.25
CPNE7-207ENST00000564421 U2AF1L5P0DN76 240 aaPredicted RBP22.83■■□□□ 1.25
CPNE7-207ENST00000564421 U2AF1Q01081 240 aaKnown RBP eCLIP22.83■■□□□ 1.25
CPNE7-207ENST00000564421 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
CPNE7-207ENST00000564421 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
CPNE7-207ENST00000564421 CAMKK2Q96RR4 588 aa22.82■■□□□ 1.24
CPNE7-207ENST00000564421 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
CPNE7-207ENST00000564421 NUP188Q5SRE5 1749 aa22.82■■□□□ 1.24
CPNE7-207ENST00000564421 FCHSD2O94868 740 aa22.81■■□□□ 1.24
CPNE7-207ENST00000564421 PRIM1P49642 420 aaKnown RBP22.81■■□□□ 1.24
CPNE7-207ENST00000564421 PNISRQ8TF01 805 aaKnown RBP22.81■■□□□ 1.24
CPNE7-207ENST00000564421 LY75O60449 1722 aa22.81■■□□□ 1.24
CPNE7-207ENST00000564421 WDR43Q15061 677 aaKnown RBP eCLIP22.8■■□□□ 1.24
CPNE7-207ENST00000564421 C1orf141Q5JVX7 400 aa22.8■■□□□ 1.24
CPNE7-207ENST00000564421 ADAMTS7Q9UKP4 1686 aa22.79■■□□□ 1.24
CPNE7-207ENST00000564421 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
CPNE7-207ENST00000564421 SYTL4Q96C24 671 aaPredicted RBP22.79■■□□□ 1.24
CPNE7-207ENST00000564421 PRKAR2BP31323 418 aa22.78■■□□□ 1.24
CPNE7-207ENST00000564421 MTHFSDQ2M296 383 aaKnown RBP22.78■■□□□ 1.24
CPNE7-207ENST00000564421 AKAP4Q5JQC9 854 aa22.78■■□□□ 1.24
CPNE7-207ENST00000564421 FAM9BQ8IZU0 186 aa22.78■■□□□ 1.24
CPNE7-207ENST00000564421 DCAF5Q96JK2 942 aa22.78■■□□□ 1.24
CPNE7-207ENST00000564421 DLG5Q8TDM6 1919 aa22.77■■□□□ 1.24
CPNE7-207ENST00000564421 KDM6AO15550 1401 aaPredicted RBP22.76■■□□□ 1.23
CPNE7-207ENST00000564421 GAS2L2Q8NHY3 880 aa22.76■■□□□ 1.23
CPNE7-207ENST00000564421 ERVV-2B6SEH9 535 aa22.75■■□□□ 1.23
CPNE7-207ENST00000564421 PNNQ9H307 717 aaKnown RBP22.75■■□□□ 1.23
CPNE7-207ENST00000564421 ADAMTS8Q9UP79 889 aa22.74■■□□□ 1.23
CPNE7-207ENST00000564421 MPRIPQ6WCQ1 1025 aa22.73■■□□□ 1.23
CPNE7-207ENST00000564421 PHACTR3Q96KR7 559 aa22.73■■□□□ 1.23
CPNE7-207ENST00000564421 TMOD3Q9NYL9 352 aa22.72■■□□□ 1.23
CPNE7-207ENST00000564421 TXNRD1Q16881 649 aa22.71■■□□□ 1.23
CPNE7-207ENST00000564421 PROM2Q8N271 834 aa22.71■■□□□ 1.23
CPNE7-207ENST00000564421 SIPA1L3O60292 1781 aaPredicted RBP22.71■■□□□ 1.23
CPNE7-207ENST00000564421 NEFMP07197 916 aa22.7■■□□□ 1.22
CPNE7-207ENST00000564421 PIGBQ92521 554 aa22.7■■□□□ 1.22
CPNE7-207ENST00000564421 PLEKHF1Q96S99 279 aa22.7■■□□□ 1.22
CPNE7-207ENST00000564421 MAP3K5Q99683 1374 aa22.7■■□□□ 1.22
CPNE7-207ENST00000564421 MRC1P22897 1456 aa22.7■■□□□ 1.22
CPNE7-207ENST00000564421 TAF1LQ8IZX4 1826 aa22.7■■□□□ 1.22
CPNE7-207ENST00000564421 GNAT3A8MTJ3 354 aa22.68■■□□□ 1.22
CPNE7-207ENST00000564421 RNMTO43148 476 aaKnown RBP22.68■■□□□ 1.22
CPNE7-207ENST00000564421 SMARCC1Q92922 1105 aaPredicted RBP22.68■■□□□ 1.22
CPNE7-207ENST00000564421 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
CPNE7-207ENST00000564421 CABP4P57796 275 aa22.67■■□□□ 1.22
CPNE7-207ENST00000564421 ZNF831Q5JPB2 1677 aa22.67■■□□□ 1.22
CPNE7-207ENST00000564421 PALLDQ8WX93 1383 aa22.66■■□□□ 1.22
CPNE7-207ENST00000564421 SLC27A3Q5K4L6 730 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms