RNA–Protein interactions for RNA: ENST00000564022.1

SCAPER-210, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-210ENST00000564022 C6orf118Q5T5N4 469 aa8.65□□□□□ -1.02
SCAPER-210ENST00000564022 C1orf115Q9H7X2 142 aa8.65□□□□□ -1.02
SCAPER-210ENST00000564022 USP17L3A6NCW0 530 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 USP17L4A6NCW7 530 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 RFX1P22670 979 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 MRPL14Q6P1L8 145 aaKnown RBP8.64□□□□□ -1.03
SCAPER-210ENST00000564022 USP17L2Q6R6M4 530 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 Q6ZVU0 165 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 USP17L1Q7RTZ2 530 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 MEIOBQ8N635 442 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 SIRT1Q96EB6 747 aa8.64□□□□□ -1.03
SCAPER-210ENST00000564022 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
SCAPER-210ENST00000564022 ADH1AP07327 375 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 BMP2P12643 396 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 SCARF1Q14162 830 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 TRIM46Q7Z4K8 759 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 CCDC82Q8N4S0 544 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 PURBQ96QR8 312 aaKnown RBP8.63□□□□□ -1.03
SCAPER-210ENST00000564022 ARID3AQ99856 593 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 ATP13A2Q9NQ11 1180 aa8.63□□□□□ -1.03
SCAPER-210ENST00000564022 MAFBQ9Y5Q3 323 aaPredicted RBP8.63□□□□□ -1.03
SCAPER-210ENST00000564022 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
SCAPER-210ENST00000564022 CYP2U1Q7Z449 544 aa8.62□□□□□ -1.03
SCAPER-210ENST00000564022 LINC00528Q8N1L1 170 aa8.62□□□□□ -1.03
SCAPER-210ENST00000564022 TSEN34Q9BSV6 310 aaKnown RBP8.62□□□□□ -1.03
SCAPER-210ENST00000564022 SERPINA10Q9UK55 444 aa8.62□□□□□ -1.03
SCAPER-210ENST00000564022 NOD1Q9Y239 953 aa8.62□□□□□ -1.03
SCAPER-210ENST00000564022 LZTS3O60299 673 aaPredicted RBP8.61□□□□□ -1.03
SCAPER-210ENST00000564022 MKRN1Q9UHC7 482 aaKnown RBP8.61□□□□□ -1.03
SCAPER-210ENST00000564022 PTGIRP43119 386 aa8.6□□□□□ -1.03
SCAPER-210ENST00000564022 PSME1Q06323 249 aa8.6□□□□□ -1.03
SCAPER-210ENST00000564022 CDCA8Q53HL2 280 aa8.6□□□□□ -1.03
SCAPER-210ENST00000564022 PLEKHM2Q8IWE5 1019 aa8.6□□□□□ -1.03
SCAPER-210ENST00000564022 ZFP42Q96MM3 310 aa8.6□□□□□ -1.03
SCAPER-210ENST00000564022 RAB6BQ9NRW1 208 aa8.6□□□□□ -1.03
SCAPER-210ENST00000564022 GTF2IP78347 998 aa8.59□□□□□ -1.03
SCAPER-210ENST00000564022 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
SCAPER-210ENST00000564022 KDF1Q8NAX2 398 aaPredicted RBP8.59□□□□□ -1.03
SCAPER-210ENST00000564022 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
SCAPER-210ENST00000564022 GMPR2Q9P2T1 348 aaKnown RBP8.59□□□□□ -1.03
SCAPER-210ENST00000564022 MEN1O00255 615 aa8.58□□□□□ -1.04
SCAPER-210ENST00000564022 STAU1O95793 577 aaKnown RBP8.58□□□□□ -1.04
SCAPER-210ENST00000564022 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
SCAPER-210ENST00000564022 POLMQ9NP87 494 aaPredicted RBP8.58□□□□□ -1.04
SCAPER-210ENST00000564022 A0A1W2PRU2 124 aa8.57□□□□□ -1.04
SCAPER-210ENST00000564022 TRIM50Q86XT4 487 aa8.57□□□□□ -1.04
SCAPER-210ENST00000564022 VRTNQ9H8Y1 702 aa8.57□□□□□ -1.04
SCAPER-210ENST00000564022 SPINT1O43278 529 aa8.56□□□□□ -1.04
SCAPER-210ENST00000564022 GNRH1P01148 92 aa8.56□□□□□ -1.04
SCAPER-210ENST00000564022 RASA1P20936 1047 aa8.56□□□□□ -1.04
SCAPER-210ENST00000564022 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
SCAPER-210ENST00000564022 NLRP3Q96P20 1036 aa8.56□□□□□ -1.04
SCAPER-210ENST00000564022 PCDHGA11Q9Y5H2 935 aa8.56□□□□□ -1.04
SCAPER-210ENST00000564022 FIGNL2A6NMB9 653 aa8.55□□□□□ -1.04
SCAPER-210ENST00000564022 POTECB2RU33 542 aa8.55□□□□□ -1.04
SCAPER-210ENST00000564022 CTSOP43234 321 aaPredicted RBP8.55□□□□□ -1.04
SCAPER-210ENST00000564022 ATP1A2P50993 1020 aa8.55□□□□□ -1.04
SCAPER-210ENST00000564022 OGFOD1Q8N543 542 aa8.55□□□□□ -1.04
SCAPER-210ENST00000564022 SENP2Q9HC62 589 aa8.55□□□□□ -1.04
SCAPER-210ENST00000564022 DNAAF2Q9NVR5 837 aaKnown RBP8.55□□□□□ -1.04
SCAPER-210ENST00000564022 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.54□□□□□ -1.04
SCAPER-210ENST00000564022 C11orf95C9JLR9 678 aaPredicted RBP8.54□□□□□ -1.04
SCAPER-210ENST00000564022 GDF10P55107 478 aa8.54□□□□□ -1.04
SCAPER-210ENST00000564022 CLDN10P78369 228 aa8.54□□□□□ -1.04
SCAPER-210ENST00000564022 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
SCAPER-210ENST00000564022 KANK4Q5T7N3 995 aaPredicted RBP8.54□□□□□ -1.04
SCAPER-210ENST00000564022 LARP1Q6PKG0 1096 aaKnown RBP8.54□□□□□ -1.04
SCAPER-210ENST00000564022 TPCN2Q8NHX9 752 aa8.54□□□□□ -1.04
SCAPER-210ENST00000564022 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
SCAPER-210ENST00000564022 TTLL8A6PVC2 850 aa8.53□□□□□ -1.04
SCAPER-210ENST00000564022 SOBPA7XYQ1 873 aa8.53□□□□□ -1.04
SCAPER-210ENST00000564022 CNKSR1Q969H4 720 aa8.53□□□□□ -1.04
SCAPER-210ENST00000564022 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
SCAPER-210ENST00000564022 KIAA1024Q9UPX6 916 aa8.53□□□□□ -1.04
SCAPER-210ENST00000564022 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
SCAPER-210ENST00000564022 ZBTB7BO15156 539 aaPredicted RBP8.52□□□□□ -1.05
SCAPER-210ENST00000564022 MAN1A2O60476 641 aa8.52□□□□□ -1.05
SCAPER-210ENST00000564022 IL2RAP01589 272 aa8.52□□□□□ -1.05
SCAPER-210ENST00000564022 CLN3Q13286 438 aa8.52□□□□□ -1.05
SCAPER-210ENST00000564022 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
SCAPER-210ENST00000564022 ZNF787Q6DD87 383 aa8.52□□□□□ -1.05
SCAPER-210ENST00000564022 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
SCAPER-210ENST00000564022 KIFC2Q96AC6 838 aa8.52□□□□□ -1.05
SCAPER-210ENST00000564022 TRIM47Q96LD4 638 aa8.52□□□□□ -1.05
SCAPER-210ENST00000564022 SNRPBP14678 240 aaKnown RBP8.51□□□□□ -1.05
SCAPER-210ENST00000564022 SCNN1DP51172 638 aa8.51□□□□□ -1.05
SCAPER-210ENST00000564022 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
SCAPER-210ENST00000564022 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
SCAPER-210ENST00000564022 XAGE2Q96GT9 111 aa8.51□□□□□ -1.05
SCAPER-210ENST00000564022 ESYT1Q9BSJ8 1104 aa8.51□□□□□ -1.05
SCAPER-210ENST00000564022 SOS2Q07890 1332 aaPredicted RBP8.51□□□□□ -1.05
SCAPER-210ENST00000564022 TMEM229AB2RXF0 380 aa8.5□□□□□ -1.05
SCAPER-210ENST00000564022 INHAP05111 366 aa8.5□□□□□ -1.05
SCAPER-210ENST00000564022 CENPCQ03188 943 aa8.5□□□□□ -1.05
SCAPER-210ENST00000564022 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
SCAPER-210ENST00000564022 LARGE2Q8N3Y3 721 aa8.5□□□□□ -1.05
SCAPER-210ENST00000564022 USP17L15C9J2P7 530 aa8.49□□□□□ -1.05
SCAPER-210ENST00000564022 USP17L10C9JJH3 530 aa8.49□□□□□ -1.05
SCAPER-210ENST00000564022 USP17L13C9JLJ4 530 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms