RNA–Protein interactions for RNA: ENST00000563760.5

TCF4-219, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-219ENST00000563760 IGSF1Q8N6C5 1336 aa12.49□□□□□ -0.41
TCF4-219ENST00000563760 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
TCF4-219ENST00000563760 ERBB3P21860 1342 aa12.48□□□□□ -0.41
TCF4-219ENST00000563760 HTRA3P83110 453 aa12.48□□□□□ -0.41
TCF4-219ENST00000563760 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
TCF4-219ENST00000563760 CCNL1Q9UK58 526 aaPredicted RBP12.48□□□□□ -0.41
TCF4-219ENST00000563760 DOT1LQ8TEK3 1739 aa12.48□□□□□ -0.41
TCF4-219ENST00000563760 TTC21BQ7Z4L5 1316 aa12.47□□□□□ -0.41
TCF4-219ENST00000563760 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
TCF4-219ENST00000563760 ANKRD36BQ8N2N9 1353 aa12.46□□□□□ -0.41
TCF4-219ENST00000563760 KIAA1210Q9ULL0 1709 aa12.46□□□□□ -0.41
TCF4-219ENST00000563760 RBM46Q8TBY0 533 aaKnown RBP12.46□□□□□ -0.41
TCF4-219ENST00000563760 CICQ96RK0 1608 aaPredicted RBP12.46□□□□□ -0.41
TCF4-219ENST00000563760 LTN1O94822 1766 aa12.46□□□□□ -0.42
TCF4-219ENST00000563760 C5P01031 1676 aa12.45□□□□□ -0.42
TCF4-219ENST00000563760 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
TCF4-219ENST00000563760 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
TCF4-219ENST00000563760 C16orf71Q8IYS4 520 aaPredicted RBP12.45□□□□□ -0.42
TCF4-219ENST00000563760 FLAD1Q8NFF5 587 aa12.45□□□□□ -0.42
TCF4-219ENST00000563760 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
TCF4-219ENST00000563760 NMRK2Q9NPI5 230 aa12.45□□□□□ -0.42
TCF4-219ENST00000563760 ANKRD24Q8TF21 1146 aa12.44□□□□□ -0.42
TCF4-219ENST00000563760 NSD2O96028 1365 aa12.43□□□□□ -0.42
TCF4-219ENST00000563760 FSTL1Q12841 308 aa12.43□□□□□ -0.42
TCF4-219ENST00000563760 USP47Q96K76 1375 aa12.43□□□□□ -0.42
TCF4-219ENST00000563760 USP54Q70EL1 1684 aa12.42□□□□□ -0.42
TCF4-219ENST00000563760 TAF1LQ8IZX4 1826 aa12.42□□□□□ -0.42
TCF4-219ENST00000563760 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
TCF4-219ENST00000563760 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
TCF4-219ENST00000563760 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
TCF4-219ENST00000563760 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
TCF4-219ENST00000563760 FAM208AQ9UK61 1670 aaKnown RBP12.39□□□□□ -0.43
TCF4-219ENST00000563760 EVC2Q86UK5 1308 aa12.38□□□□□ -0.43
TCF4-219ENST00000563760 PCDH10Q9P2E7 1040 aa12.38□□□□□ -0.43
TCF4-219ENST00000563760 KTN1Q86UP2 1357 aaKnown RBP12.38□□□□□ -0.43
TCF4-219ENST00000563760 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
TCF4-219ENST00000563760 UBR3Q6ZT12 1888 aa12.38□□□□□ -0.43
TCF4-219ENST00000563760 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
TCF4-219ENST00000563760 AK7Q96M32 723 aa12.37□□□□□ -0.43
TCF4-219ENST00000563760 BCS1LQ9Y276 419 aa12.37□□□□□ -0.43
TCF4-219ENST00000563760 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
TCF4-219ENST00000563760 MON2Q7Z3U7 1717 aa12.37□□□□□ -0.43
TCF4-219ENST00000563760 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
TCF4-219ENST00000563760 PLEKHG2Q9H7P9 1386 aa12.36□□□□□ -0.43
TCF4-219ENST00000563760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCF4-219ENST00000563760 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
TCF4-219ENST00000563760 KIF13BQ9NQT8 1826 aa12.36□□□□□ -0.43
TCF4-219ENST00000563760 TOGARAM1Q9Y4F4 1720 aa12.36□□□□□ -0.43
TCF4-219ENST00000563760 PKD1L3Q7Z443 1732 aa12.35□□□□□ -0.43
TCF4-219ENST00000563760 PHF14O94880 888 aa12.35□□□□□ -0.43
TCF4-219ENST00000563760 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
TCF4-219ENST00000563760 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
TCF4-219ENST00000563760 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
TCF4-219ENST00000563760 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
TCF4-219ENST00000563760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.34□□□□□ -0.43
TCF4-219ENST00000563760 SMC1BQ8NDV3 1235 aa12.34□□□□□ -0.43
TCF4-219ENST00000563760 LTV1Q96GA3 475 aaPredicted RBP12.34□□□□□ -0.43
TCF4-219ENST00000563760 TNRC6CQ9HCJ0 1690 aaKnown RBP12.34□□□□□ -0.43
TCF4-219ENST00000563760 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 KCPQ6ZWJ8 1503 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 TGFB2P61812 414 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 C9orf131Q5VYM1 1079 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 AMIGO3Q86WK7 504 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 RRAGCQ9HB90 399 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 C10orf71Q711Q0 1435 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 RGPD2P0DJD1 1756 aa12.33□□□□□ -0.44
TCF4-219ENST00000563760 RAB3GAP2Q9H2M9 1393 aa12.32□□□□□ -0.44
TCF4-219ENST00000563760 FCHSD2O94868 740 aa12.32□□□□□ -0.44
TCF4-219ENST00000563760 SMIM5Q71RC9 77 aa12.32□□□□□ -0.44
TCF4-219ENST00000563760 NME9Q86XW9 330 aa12.32□□□□□ -0.44
TCF4-219ENST00000563760 IP6K1Q92551 441 aa12.32□□□□□ -0.44
TCF4-219ENST00000563760 BRCA1P38398 1863 aaKnown RBP12.31□□□□□ -0.44
TCF4-219ENST00000563760 A0A0G2JLW4 131 aa12.31□□□□□ -0.44
TCF4-219ENST00000563760 SSFA2P28290 1259 aa12.31□□□□□ -0.44
TCF4-219ENST00000563760 ARFGEF1Q9Y6D6 1849 aa12.31□□□□□ -0.44
TCF4-219ENST00000563760 MEGF6O75095 1541 aa12.31□□□□□ -0.44
TCF4-219ENST00000563760 MMP10P09238 476 aa12.29□□□□□ -0.44
TCF4-219ENST00000563760 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
TCF4-219ENST00000563760 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
TCF4-219ENST00000563760 ITGB4P16144 1822 aa12.29□□□□□ -0.44
TCF4-219ENST00000563760 SBF1O95248 1867 aa12.28□□□□□ -0.44
TCF4-219ENST00000563760 RNF181Q9P0P0 153 aa12.28□□□□□ -0.44
TCF4-219ENST00000563760 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
TCF4-219ENST00000563760 DPEP1P16444 411 aa12.27□□□□□ -0.45
TCF4-219ENST00000563760 CGNL1Q0VF96 1302 aa12.27□□□□□ -0.45
TCF4-219ENST00000563760 CCDC87Q9NVE4 849 aa12.26□□□□□ -0.45
TCF4-219ENST00000563760 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
TCF4-219ENST00000563760 GNPATO15228 680 aa12.25□□□□□ -0.45
TCF4-219ENST00000563760 FAM161AQ3B820 660 aa12.25□□□□□ -0.45
TCF4-219ENST00000563760 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
TCF4-219ENST00000563760 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
TCF4-219ENST00000563760 HOXC9P31274 260 aa12.24□□□□□ -0.45
TCF4-219ENST00000563760 AMPHP49418 695 aa12.24□□□□□ -0.45
TCF4-219ENST00000563760 EDC4Q6P2E9 1401 aaKnown RBP12.24□□□□□ -0.45
TCF4-219ENST00000563760 HDGFL2Q7Z4V5 671 aaPredicted RBP12.24□□□□□ -0.45
TCF4-219ENST00000563760 PCDH11XQ9BZA7 1347 aa12.24□□□□□ -0.45
TCF4-219ENST00000563760 PCDH11YQ9BZA8 1340 aa12.24□□□□□ -0.45
TCF4-219ENST00000563760 PRDM10Q9NQV6 1147 aa12.24□□□□□ -0.45
TCF4-219ENST00000563760 CD163L1Q9NR16 1453 aa12.24□□□□□ -0.45
TCF4-219ENST00000563760 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms