RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 GPR162Q16538 588 aa24.19■■□□□ 1.46
MAP1LC3B-204ENST00000563720 ZNF827Q17R98 1081 aa24.19■■□□□ 1.46
MAP1LC3B-204ENST00000563720 LTV1Q96GA3 475 aaPredicted RBP24.19■■□□□ 1.46
MAP1LC3B-204ENST00000563720 CHD4Q14839 1912 aa24.19■■□□□ 1.46
MAP1LC3B-204ENST00000563720 RTL1A6NKG5 1358 aa24.18■■□□□ 1.46
MAP1LC3B-204ENST00000563720 HSPA5P11021 654 aaKnown RBP24.18■■□□□ 1.46
MAP1LC3B-204ENST00000563720 AMPHP49418 695 aa24.18■■□□□ 1.46
MAP1LC3B-204ENST00000563720 PAPPAQ13219 1627 aa24.17■■□□□ 1.46
MAP1LC3B-204ENST00000563720 RRS1Q15050 365 aaKnown RBP24.17■■□□□ 1.46
MAP1LC3B-204ENST00000563720 KLHL34Q8N239 644 aa24.17■■□□□ 1.46
MAP1LC3B-204ENST00000563720 LRRC4BQ9NT99 713 aa24.17■■□□□ 1.46
MAP1LC3B-204ENST00000563720 ANKRD26Q9UPS8 1709 aa24.17■■□□□ 1.46
MAP1LC3B-204ENST00000563720 MAP2P11137 1827 aaKnown RBP24.17■■□□□ 1.46
MAP1LC3B-204ENST00000563720 SHANK3Q9BYB0 1731 aa24.15■■□□□ 1.46
MAP1LC3B-204ENST00000563720 UTRNP46939 3433 aa24.15■■□□□ 1.46
MAP1LC3B-204ENST00000563720 BTAF1O14981 1849 aa24.14■■□□□ 1.46
MAP1LC3B-204ENST00000563720 POLD1P28340 1107 aa24.14■■□□□ 1.45
MAP1LC3B-204ENST00000563720 SLC16A10Q8TF71 515 aa24.13■■□□□ 1.45
MAP1LC3B-204ENST00000563720 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
MAP1LC3B-204ENST00000563720 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
MAP1LC3B-204ENST00000563720 AKT1S1Q96B36 256 aa24.12■■□□□ 1.45
MAP1LC3B-204ENST00000563720 POLR3GLQ9BT43 218 aa24.12■■□□□ 1.45
MAP1LC3B-204ENST00000563720 DDX54Q8TDD1 881 aaKnown RBP24.11■■□□□ 1.45
MAP1LC3B-204ENST00000563720 KIF24Q5T7B8 1368 aa24.09■■□□□ 1.45
MAP1LC3B-204ENST00000563720 INSRP06213 1382 aa24.08■■□□□ 1.45
MAP1LC3B-204ENST00000563720 FLT4P35916 1363 aa24.08■■□□□ 1.45
MAP1LC3B-204ENST00000563720 GIGYF1O75420 1035 aaPredicted RBP24.08■■□□□ 1.45
MAP1LC3B-204ENST00000563720 TFCP2L1Q9NZI6 479 aa24.08■■□□□ 1.45
MAP1LC3B-204ENST00000563720 MEGF6O75095 1541 aa24.08■■□□□ 1.45
MAP1LC3B-204ENST00000563720 CGNL1Q0VF96 1302 aa24.08■■□□□ 1.44
MAP1LC3B-204ENST00000563720 PNPLA7Q6ZV29 1317 aa24.08■■□□□ 1.44
MAP1LC3B-204ENST00000563720 HSP90AB2PQ58FF8 381 aa24.07■■□□□ 1.44
MAP1LC3B-204ENST00000563720 SYTL4Q96C24 671 aaPredicted RBP24.07■■□□□ 1.44
MAP1LC3B-204ENST00000563720 NBPF6Q5VWK0 638 aa24.06■■□□□ 1.44
MAP1LC3B-204ENST00000563720 NBPF4Q96M43 638 aa24.06■■□□□ 1.44
MAP1LC3B-204ENST00000563720 SMG6Q86US8 1419 aaKnown RBP24.06■■□□□ 1.44
MAP1LC3B-204ENST00000563720 DOT1LQ8TEK3 1739 aa24.06■■□□□ 1.44
MAP1LC3B-204ENST00000563720 KCNQ4P56696 695 aa24.05■■□□□ 1.44
MAP1LC3B-204ENST00000563720 EMILIN1Q9Y6C2 1016 aa24.04■■□□□ 1.44
MAP1LC3B-204ENST00000563720 PRIM1P49642 420 aaKnown RBP24.02■■□□□ 1.44
MAP1LC3B-204ENST00000563720 USHBP1Q8N6Y0 703 aa24.02■■□□□ 1.44
MAP1LC3B-204ENST00000563720 NLGN2Q8NFZ4 835 aa24.02■■□□□ 1.44
MAP1LC3B-204ENST00000563720 PANK3Q9H999 370 aa24.02■■□□□ 1.44
MAP1LC3B-204ENST00000563720 QSER1Q2KHR3 1735 aa24.01■■□□□ 1.43
MAP1LC3B-204ENST00000563720 MSH5O43196 834 aa23.99■■□□□ 1.43
MAP1LC3B-204ENST00000563720 ZCRB1Q8TBF4 217 aaKnown RBP23.99■■□□□ 1.43
MAP1LC3B-204ENST00000563720 PKD1L3Q7Z443 1732 aa23.98■■□□□ 1.43
MAP1LC3B-204ENST00000563720 GRIN3BO60391 1043 aa23.97■■□□□ 1.43
MAP1LC3B-204ENST00000563720 WASHC2AQ641Q2 1341 aa23.97■■□□□ 1.43
MAP1LC3B-204ENST00000563720 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
MAP1LC3B-204ENST00000563720 COL24A1Q17RW2 1714 aa23.96■■□□□ 1.43
MAP1LC3B-204ENST00000563720 NCAPD2Q15021 1401 aa23.96■■□□□ 1.43
MAP1LC3B-204ENST00000563720 PPM1GO15355 546 aaPredicted RBP23.96■■□□□ 1.43
MAP1LC3B-204ENST00000563720 POLKQ9UBT6 870 aa23.96■■□□□ 1.43
MAP1LC3B-204ENST00000563720 LY75O60449 1722 aa23.96■■□□□ 1.43
MAP1LC3B-204ENST00000563720 RAPGEF4Q8WZA2 1011 aa23.95■■□□□ 1.42
MAP1LC3B-204ENST00000563720 TUBGCP6Q96RT7 1819 aa23.94■■□□□ 1.42
MAP1LC3B-204ENST00000563720 YBX3P16989 372 aaKnown RBP eCLIP23.94■■□□□ 1.42
MAP1LC3B-204ENST00000563720 TATP17735 454 aaPredicted RBP23.94■■□□□ 1.42
MAP1LC3B-204ENST00000563720 NSD2O96028 1365 aa23.93■■□□□ 1.42
MAP1LC3B-204ENST00000563720 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
MAP1LC3B-204ENST00000563720 ITGB4P16144 1822 aa23.92■■□□□ 1.42
MAP1LC3B-204ENST00000563720 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
MAP1LC3B-204ENST00000563720 COL23A1Q86Y22 540 aaPredicted RBP23.92■■□□□ 1.42
MAP1LC3B-204ENST00000563720 TOGARAM1Q9Y4F4 1720 aa23.91■■□□□ 1.42
MAP1LC3B-204ENST00000563720 IFFO2Q5TF58 517 aa23.9■■□□□ 1.42
MAP1LC3B-204ENST00000563720 MSL1Q68DK7 614 aa23.9■■□□□ 1.42
MAP1LC3B-204ENST00000563720 EYA1Q99502 592 aa23.88■■□□□ 1.41
MAP1LC3B-204ENST00000563720 PCDH11XQ9BZA7 1347 aa23.87■■□□□ 1.41
MAP1LC3B-204ENST00000563720 PCDH11YQ9BZA8 1340 aa23.87■■□□□ 1.41
MAP1LC3B-204ENST00000563720 GOLGB1Q14789 3259 aaKnown RBP23.86■■□□□ 1.41
MAP1LC3B-204ENST00000563720 EIF4A2Q14240 407 aaKnown RBP23.85■■□□□ 1.41
MAP1LC3B-204ENST00000563720 KNSTRNQ9Y448 316 aa23.85■■□□□ 1.41
MAP1LC3B-204ENST00000563720 ATP10DQ9P241 1426 aa23.84■■□□□ 1.41
MAP1LC3B-204ENST00000563720 CYP27B1O15528 508 aa23.84■■□□□ 1.41
MAP1LC3B-204ENST00000563720 MORC1Q86VD1 984 aa23.84■■□□□ 1.41
MAP1LC3B-204ENST00000563720 HMGB2P26583 209 aaKnown RBP23.83■■□□□ 1.41
MAP1LC3B-204ENST00000563720 CD2APQ9Y5K6 639 aa23.83■■□□□ 1.41
MAP1LC3B-204ENST00000563720 AMER1Q5JTC6 1135 aaPredicted RBP23.82■■□□□ 1.4
MAP1LC3B-204ENST00000563720 FLAD1Q8NFF5 587 aa23.82■■□□□ 1.4
MAP1LC3B-204ENST00000563720 GPBP1L1Q9HC44 474 aaPredicted RBP23.82■■□□□ 1.4
MAP1LC3B-204ENST00000563720 TAF1LQ8IZX4 1826 aa23.81■■□□□ 1.4
MAP1LC3B-204ENST00000563720 IGSF1Q8N6C5 1336 aa23.8■■□□□ 1.4
MAP1LC3B-204ENST00000563720 SPG7Q9UQ90 795 aa23.79■■□□□ 1.4
MAP1LC3B-204ENST00000563720 PALLDQ8WX93 1383 aa23.78■■□□□ 1.4
MAP1LC3B-204ENST00000563720 PER1O15534 1290 aaPredicted RBP23.78■■□□□ 1.4
MAP1LC3B-204ENST00000563720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.78■■□□□ 1.4
MAP1LC3B-204ENST00000563720 C5P01031 1676 aa23.78■■□□□ 1.4
MAP1LC3B-204ENST00000563720 NKX1-1Q15270 411 aaPredicted RBP23.77■■□□□ 1.4
MAP1LC3B-204ENST00000563720 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
MAP1LC3B-204ENST00000563720 ZNF526Q8TF50 670 aaPredicted RBP23.77■■□□□ 1.4
MAP1LC3B-204ENST00000563720 PLEKHG2Q9H7P9 1386 aa23.77■■□□□ 1.4
MAP1LC3B-204ENST00000563720 AK7Q96M32 723 aa23.75■■□□□ 1.39
MAP1LC3B-204ENST00000563720 SMARCC1Q92922 1105 aaPredicted RBP23.73■■□□□ 1.39
MAP1LC3B-204ENST00000563720 CEP350Q5VT06 3117 aa23.73■■□□□ 1.39
MAP1LC3B-204ENST00000563720 PHF14O94880 888 aa23.72■■□□□ 1.39
MAP1LC3B-204ENST00000563720 PHKG2P15735 406 aa23.72■■□□□ 1.39
MAP1LC3B-204ENST00000563720 HSPA6P17066 643 aa23.72■■□□□ 1.39
MAP1LC3B-204ENST00000563720 WWC3Q9ULE0 1092 aa23.72■■□□□ 1.39
MAP1LC3B-204ENST00000563720 ADCY9O60503 1353 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms