RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 MARCH10Q8NA82 808 aaPredicted RBP19.9■□□□□ 0.78
SCAMP2-203ENST00000563663 UPF1Q92900 1129 aaKnown RBP eCLIP19.9■□□□□ 0.781e-9■■■■■ 38.1
SCAMP2-203ENST00000563663 AEBP1Q8IUX7 1158 aa19.88■□□□□ 0.77
SCAMP2-203ENST00000563663 PLEKHG2Q9H7P9 1386 aa19.87■□□□□ 0.77
SCAMP2-203ENST00000563663 RALBP1Q15311 655 aa19.87■□□□□ 0.77
SCAMP2-203ENST00000563663 PRKRIP1Q9H875 184 aaPredicted RBP19.86■□□□□ 0.77
SCAMP2-203ENST00000563663 PDE3BQ13370 1112 aa19.85■□□□□ 0.77
SCAMP2-203ENST00000563663 TOGARAM1Q9Y4F4 1720 aa19.85■□□□□ 0.77
SCAMP2-203ENST00000563663 EXOC5O00471 708 aa19.85■□□□□ 0.77
SCAMP2-203ENST00000563663 NHSQ6T4R5 1651 aa19.84■□□□□ 0.77
SCAMP2-203ENST00000563663 DIAPH1O60610 1272 aaKnown RBP19.84■□□□□ 0.77
SCAMP2-203ENST00000563663 DOT1LQ8TEK3 1739 aa19.84■□□□□ 0.77
SCAMP2-203ENST00000563663 ANP32CO43423 234 aa19.83■□□□□ 0.76
SCAMP2-203ENST00000563663 FAM196AQ6ZSG2 479 aa19.83■□□□□ 0.76
SCAMP2-203ENST00000563663 RAPGEF4Q8WZA2 1011 aa19.83■□□□□ 0.76
SCAMP2-203ENST00000563663 CYP27B1O15528 508 aa19.81■□□□□ 0.76
SCAMP2-203ENST00000563663 TATP17735 454 aaPredicted RBP19.81■□□□□ 0.76
SCAMP2-203ENST00000563663 SULT6B1Q6IMI4 303 aa19.81■□□□□ 0.76
SCAMP2-203ENST00000563663 ZCRB1Q8TBF4 217 aaKnown RBP19.81■□□□□ 0.76
SCAMP2-203ENST00000563663 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
SCAMP2-203ENST00000563663 PTF1AQ7RTS3 328 aa19.8■□□□□ 0.76
SCAMP2-203ENST00000563663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.8■□□□□ 0.76
SCAMP2-203ENST00000563663 PELP1Q8IZL8 1130 aaKnown RBP19.78■□□□□ 0.76
SCAMP2-203ENST00000563663 BTAF1O14981 1849 aa19.78■□□□□ 0.76
SCAMP2-203ENST00000563663 ITGB4P16144 1822 aa19.77■□□□□ 0.76
SCAMP2-203ENST00000563663 RGPD3A6NKT7 1758 aaPredicted RBP19.77■□□□□ 0.76
SCAMP2-203ENST00000563663 RGPD4Q7Z3J3 1758 aa19.77■□□□□ 0.76
SCAMP2-203ENST00000563663 PCDH11XQ9BZA7 1347 aa19.77■□□□□ 0.76
SCAMP2-203ENST00000563663 PCDH11YQ9BZA8 1340 aa19.77■□□□□ 0.76
SCAMP2-203ENST00000563663 HMOX1P09601 288 aa19.77■□□□□ 0.76
SCAMP2-203ENST00000563663 VIRMAQ69YN4 1812 aaKnown RBP19.77■□□□□ 0.75
SCAMP2-203ENST00000563663 TRIM37O94972 964 aa19.76■□□□□ 0.75
SCAMP2-203ENST00000563663 DDX54Q8TDD1 881 aaKnown RBP19.76■□□□□ 0.75
SCAMP2-203ENST00000563663 CFAP53Q96M91 514 aa19.76■□□□□ 0.75
SCAMP2-203ENST00000563663 ADAMTS7Q9UKP4 1686 aa19.76■□□□□ 0.75
SCAMP2-203ENST00000563663 KAT6BQ8WYB5 2073 aa19.76■□□□□ 0.75
SCAMP2-203ENST00000563663 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
SCAMP2-203ENST00000563663 RSPH6AQ9H0K4 717 aa19.75■□□□□ 0.75
SCAMP2-203ENST00000563663 NKX1-1Q15270 411 aaPredicted RBP19.75■□□□□ 0.75
SCAMP2-203ENST00000563663 KCNQ2O43526 872 aa19.74■□□□□ 0.75
SCAMP2-203ENST00000563663 RREB1Q92766 1687 aa19.74■□□□□ 0.75
SCAMP2-203ENST00000563663 KDM6AO15550 1401 aaPredicted RBP19.73■□□□□ 0.75
SCAMP2-203ENST00000563663 SCN11AQ9UI33 1791 aa19.73■□□□□ 0.75
SCAMP2-203ENST00000563663 U2SURPO15042 1029 aaKnown RBP19.72■□□□□ 0.75
SCAMP2-203ENST00000563663 PHKG2P15735 406 aa19.72■□□□□ 0.75
SCAMP2-203ENST00000563663 SPG7Q9UQ90 795 aa19.72■□□□□ 0.75
SCAMP2-203ENST00000563663 DEFB132Q7Z7B7 95 aa19.72■□□□□ 0.75
SCAMP2-203ENST00000563663 BCL11BQ9C0K0 894 aaPredicted RBP19.71■□□□□ 0.75
SCAMP2-203ENST00000563663 CCDC184Q52MB2 194 aa19.7■□□□□ 0.74
SCAMP2-203ENST00000563663 ACSBG1Q96GR2 724 aa19.7■□□□□ 0.74
SCAMP2-203ENST00000563663 NUP188Q5SRE5 1749 aa19.69■□□□□ 0.74
SCAMP2-203ENST00000563663 AMOTQ4VCS5 1084 aa19.69■□□□□ 0.74
SCAMP2-203ENST00000563663 PHACTR3Q96KR7 559 aa19.69■□□□□ 0.74
SCAMP2-203ENST00000563663 LY75O60449 1722 aa19.69■□□□□ 0.74
SCAMP2-203ENST00000563663 U2AF1L5P0DN76 240 aaPredicted RBP19.68■□□□□ 0.74
SCAMP2-203ENST00000563663 U2AF1Q01081 240 aaKnown RBP eCLIP19.68■□□□□ 0.74
SCAMP2-203ENST00000563663 MTHFSDQ2M296 383 aaKnown RBP19.68■□□□□ 0.74
SCAMP2-203ENST00000563663 PLEKHO1Q53GL0 409 aaPredicted RBP19.68■□□□□ 0.74
SCAMP2-203ENST00000563663 IFNL2Q8IZJ0 200 aa19.68■□□□□ 0.74
SCAMP2-203ENST00000563663 NUDCQ9Y266 331 aa19.68■□□□□ 0.74
SCAMP2-203ENST00000563663 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
SCAMP2-203ENST00000563663 CAMKK2Q96RR4 588 aa19.67■□□□□ 0.74
SCAMP2-203ENST00000563663 PLEKHF1Q96S99 279 aa19.67■□□□□ 0.74
SCAMP2-203ENST00000563663 DLG5Q8TDM6 1919 aa19.67■□□□□ 0.74
SCAMP2-203ENST00000563663 MRC1P22897 1456 aa19.67■□□□□ 0.74
SCAMP2-203ENST00000563663 FCHSD2O94868 740 aa19.67■□□□□ 0.74
SCAMP2-203ENST00000563663 ZNF530Q6P9A1 599 aaPredicted RBP19.67■□□□□ 0.74
SCAMP2-203ENST00000563663 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
SCAMP2-203ENST00000563663 EN1Q05925 392 aaPredicted RBP19.65■□□□□ 0.74
SCAMP2-203ENST00000563663 SIPA1L3O60292 1781 aaPredicted RBP19.65■□□□□ 0.74
SCAMP2-203ENST00000563663 APBA3O96018 575 aa19.65■□□□□ 0.74
SCAMP2-203ENST00000563663 SRCAPQ6ZRS2 3230 aa19.64■□□□□ 0.73
SCAMP2-203ENST00000563663 PROM2Q8N271 834 aa19.64■□□□□ 0.73
SCAMP2-203ENST00000563663 PAPPAQ13219 1627 aa19.64■□□□□ 0.73
SCAMP2-203ENST00000563663 PLSCR1O15162 318 aa19.63■□□□□ 0.73
SCAMP2-203ENST00000563663 BAG6P46379 1132 aa19.62■□□□□ 0.73
SCAMP2-203ENST00000563663 EZH2Q15910 746 aaKnown RBP19.62■□□□□ 0.73
SCAMP2-203ENST00000563663 AKAP4Q5JQC9 854 aa19.62■□□□□ 0.73
SCAMP2-203ENST00000563663 DCAF5Q96JK2 942 aa19.62■□□□□ 0.73
SCAMP2-203ENST00000563663 SF3B2Q13435 895 aaKnown RBP19.61■□□□□ 0.73
SCAMP2-203ENST00000563663 PIGBQ92521 554 aa19.6■□□□□ 0.73
SCAMP2-203ENST00000563663 MAP3K5Q99683 1374 aa19.6■□□□□ 0.73
SCAMP2-203ENST00000563663 MPRIPQ6WCQ1 1025 aa19.6■□□□□ 0.73
SCAMP2-203ENST00000563663 CEMIPQ8WUJ3 1361 aa19.59■□□□□ 0.73
SCAMP2-203ENST00000563663 HSP90AB1P08238 724 aaKnown RBP19.59■□□□□ 0.73
SCAMP2-203ENST00000563663 LGR6Q9HBX8 967 aa19.59■□□□□ 0.73
SCAMP2-203ENST00000563663 ADAMTS8Q9UP79 889 aa19.59■□□□□ 0.73
SCAMP2-203ENST00000563663 ERVV-2B6SEH9 535 aa19.58■□□□□ 0.73
SCAMP2-203ENST00000563663 C1orf141Q5JVX7 400 aa19.58■□□□□ 0.73
SCAMP2-203ENST00000563663 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.73
SCAMP2-203ENST00000563663 SYTL4Q96C24 671 aaPredicted RBP19.58■□□□□ 0.73
SCAMP2-203ENST00000563663 TAF1LQ8IZX4 1826 aa19.58■□□□□ 0.72
SCAMP2-203ENST00000563663 IL17REQ8NFR9 667 aa19.57■□□□□ 0.72
SCAMP2-203ENST00000563663 UBR2Q8IWV8 1755 aa19.56■□□□□ 0.72
SCAMP2-203ENST00000563663 RNMTO43148 476 aaKnown RBP19.56■□□□□ 0.72
SCAMP2-203ENST00000563663 PNISRQ8TF01 805 aaKnown RBP19.56■□□□□ 0.72
SCAMP2-203ENST00000563663 ZNF831Q5JPB2 1677 aa19.56■□□□□ 0.72
SCAMP2-203ENST00000563663 LRRC4BQ9NT99 713 aa19.55■□□□□ 0.72
SCAMP2-203ENST00000563663 CICQ96RK0 1608 aaPredicted RBP19.55■□□□□ 0.72
SCAMP2-203ENST00000563663 TXNRD1Q16881 649 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms