RNA–Protein interactions for RNA: ENST00000563616.1

SLX1A-203, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX1A, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-203ENST00000563616 HSPA6P17066 643 aa16.81■□□□□ 0.28
SLX1A-203ENST00000563616 COL23A1Q86Y22 540 aaPredicted RBP16.81■□□□□ 0.28
SLX1A-203ENST00000563616 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
SLX1A-203ENST00000563616 CCNL1Q9UK58 526 aaPredicted RBP16.81■□□□□ 0.28
SLX1A-203ENST00000563616 ADCY9O60503 1353 aa16.8■□□□□ 0.28
SLX1A-203ENST00000563616 ROCK2O75116 1388 aaKnown RBP16.8■□□□□ 0.28
SLX1A-203ENST00000563616 MSL1Q68DK7 614 aa16.8■□□□□ 0.28
SLX1A-203ENST00000563616 ZNF526Q8TF50 670 aaPredicted RBP16.78■□□□□ 0.28
SLX1A-203ENST00000563616 IP6K1Q92551 441 aa16.78■□□□□ 0.28
SLX1A-203ENST00000563616 LTV1Q96GA3 475 aaPredicted RBP16.78■□□□□ 0.28
SLX1A-203ENST00000563616 CD2APQ9Y5K6 639 aa16.77■□□□□ 0.28
SLX1A-203ENST00000563616 EDC4Q6P2E9 1401 aaKnown RBP16.77■□□□□ 0.27
SLX1A-203ENST00000563616 RGPD2P0DJD1 1756 aa16.76■□□□□ 0.27
SLX1A-203ENST00000563616 C5P01031 1676 aa16.75■□□□□ 0.27
SLX1A-203ENST00000563616 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
SLX1A-203ENST00000563616 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
SLX1A-203ENST00000563616 USP47Q96K76 1375 aa16.75■□□□□ 0.27
SLX1A-203ENST00000563616 MEGF6O75095 1541 aa16.75■□□□□ 0.27
SLX1A-203ENST00000563616 ZCRB1Q8TBF4 217 aaKnown RBP16.74■□□□□ 0.27
SLX1A-203ENST00000563616 SLC12A5Q9H2X9 1139 aa16.73■□□□□ 0.27
SLX1A-203ENST00000563616 TAF1LQ8IZX4 1826 aa16.73■□□□□ 0.27
SLX1A-203ENST00000563616 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
SLX1A-203ENST00000563616 PCNTO95613 3336 aa16.71■□□□□ 0.27
SLX1A-203ENST00000563616 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
SLX1A-203ENST00000563616 HOXC9P31274 260 aa16.7■□□□□ 0.26
SLX1A-203ENST00000563616 FLAD1Q8NFF5 587 aa16.7■□□□□ 0.26
SLX1A-203ENST00000563616 TERF2IPQ9NYB0 399 aa16.7■□□□□ 0.26
SLX1A-203ENST00000563616 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
SLX1A-203ENST00000563616 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
SLX1A-203ENST00000563616 KIF3CO14782 793 aa16.68■□□□□ 0.26
SLX1A-203ENST00000563616 PALLDQ8WX93 1383 aa16.67■□□□□ 0.26
SLX1A-203ENST00000563616 AMPHP49418 695 aa16.67■□□□□ 0.26
SLX1A-203ENST00000563616 SIN3AQ96ST3 1273 aa16.67■□□□□ 0.26
SLX1A-203ENST00000563616 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
SLX1A-203ENST00000563616 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
SLX1A-203ENST00000563616 FBLN1P23142 703 aa16.66■□□□□ 0.26
SLX1A-203ENST00000563616 UBR3Q6ZT12 1888 aa16.66■□□□□ 0.26
SLX1A-203ENST00000563616 HMGB2P26583 209 aaKnown RBP16.65■□□□□ 0.26
SLX1A-203ENST00000563616 NBPF6Q5VWK0 638 aa16.65■□□□□ 0.26
SLX1A-203ENST00000563616 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
SLX1A-203ENST00000563616 COG3Q96JB2 828 aa16.65■□□□□ 0.26
SLX1A-203ENST00000563616 NBPF4Q96M43 638 aa16.65■□□□□ 0.26
SLX1A-203ENST00000563616 CGNL1Q0VF96 1302 aa16.65■□□□□ 0.26
SLX1A-203ENST00000563616 APLP1P51693 650 aa16.64■□□□□ 0.25
SLX1A-203ENST00000563616 USHBP1Q8N6Y0 703 aa16.64■□□□□ 0.25
SLX1A-203ENST00000563616 RAPGEF4Q8WZA2 1011 aa16.64■□□□□ 0.25
SLX1A-203ENST00000563616 AK7Q96M32 723 aa16.64■□□□□ 0.25
SLX1A-203ENST00000563616 RTL1A6NKG5 1358 aa16.64■□□□□ 0.25
SLX1A-203ENST00000563616 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
SLX1A-203ENST00000563616 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
SLX1A-203ENST00000563616 CARD11Q9BXL7 1154 aa16.63■□□□□ 0.25
SLX1A-203ENST00000563616 ITGB4P16144 1822 aa16.63■□□□□ 0.25
SLX1A-203ENST00000563616 PHF14O94880 888 aa16.62■□□□□ 0.25
SLX1A-203ENST00000563616 MPRIPQ6WCQ1 1025 aa16.62■□□□□ 0.25
SLX1A-203ENST00000563616 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
SLX1A-203ENST00000563616 PCDH11XQ9BZA7 1347 aa16.62■□□□□ 0.25
SLX1A-203ENST00000563616 PCDH11YQ9BZA8 1340 aa16.62■□□□□ 0.25
SLX1A-203ENST00000563616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.61■□□□□ 0.25
SLX1A-203ENST00000563616 DNAJC5GQ8N7S2 189 aa16.61■□□□□ 0.25
SLX1A-203ENST00000563616 PUS7Q96PZ0 661 aaKnown RBP16.61■□□□□ 0.25
SLX1A-203ENST00000563616 NSD3Q9BZ95 1437 aa16.61■□□□□ 0.25
SLX1A-203ENST00000563616 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
SLX1A-203ENST00000563616 SMG6Q86US8 1419 aaKnown RBP16.6■□□□□ 0.25
SLX1A-203ENST00000563616 RRS1Q15050 365 aaKnown RBP16.59■□□□□ 0.25
SLX1A-203ENST00000563616 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
SLX1A-203ENST00000563616 CYP27B1O15528 508 aa16.58■□□□□ 0.24
SLX1A-203ENST00000563616 TOMM70O94826 608 aa16.58■□□□□ 0.24
SLX1A-203ENST00000563616 SSFA2P28290 1259 aa16.58■□□□□ 0.24
SLX1A-203ENST00000563616 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
SLX1A-203ENST00000563616 KIF13BQ9NQT8 1826 aa16.57■□□□□ 0.24
SLX1A-203ENST00000563616 KIAA1551Q9HCM1 1747 aa16.56■□□□□ 0.24
SLX1A-203ENST00000563616 PXDNLA1KZ92 1463 aa16.56■□□□□ 0.24
SLX1A-203ENST00000563616 N4BP2Q86UW6 1770 aaPredicted RBP16.56■□□□□ 0.24
SLX1A-203ENST00000563616 WDR90Q96KV7 1748 aa16.56■□□□□ 0.24
SLX1A-203ENST00000563616 LINC00116Q8NCU8 138 aa16.55■□□□□ 0.24
SLX1A-203ENST00000563616 PIGBQ92521 554 aa16.55■□□□□ 0.24
SLX1A-203ENST00000563616 PKD1L3Q7Z443 1732 aa16.55■□□□□ 0.24
SLX1A-203ENST00000563616 HSP90AB2PQ58FF8 381 aa16.54■□□□□ 0.24
SLX1A-203ENST00000563616 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
SLX1A-203ENST00000563616 INSRP06213 1382 aa16.53■□□□□ 0.24
SLX1A-203ENST00000563616 LOC102724428A0A0B4J2F2 783 aa16.53■□□□□ 0.24
SLX1A-203ENST00000563616 MMP10P09238 476 aa16.53■□□□□ 0.24
SLX1A-203ENST00000563616 SIK1P57059 783 aa16.53■□□□□ 0.24
SLX1A-203ENST00000563616 GGNBP2Q9H3C7 697 aa16.53■□□□□ 0.24
SLX1A-203ENST00000563616 GNPATO15228 680 aa16.52■□□□□ 0.24
SLX1A-203ENST00000563616 TESK2Q96S53 571 aa16.52■□□□□ 0.24
SLX1A-203ENST00000563616 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
SLX1A-203ENST00000563616 FLT4P35916 1363 aa16.51■□□□□ 0.23
SLX1A-203ENST00000563616 FYB1O15117 783 aa16.51■□□□□ 0.23
SLX1A-203ENST00000563616 BRCA1P38398 1863 aaKnown RBP16.5■□□□□ 0.23
SLX1A-203ENST00000563616 A0A0G2JLW4 131 aa16.5■□□□□ 0.23
SLX1A-203ENST00000563616 TGFB2P61812 414 aa16.5■□□□□ 0.23
SLX1A-203ENST00000563616 ITPK1Q13572 414 aa16.5■□□□□ 0.23
SLX1A-203ENST00000563616 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
SLX1A-203ENST00000563616 COL13A1Q5TAT6 717 aaPredicted RBP16.5■□□□□ 0.23
SLX1A-203ENST00000563616 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
SLX1A-203ENST00000563616 RBM46Q8TBY0 533 aaKnown RBP16.5■□□□□ 0.23
SLX1A-203ENST00000563616 C10orf71Q711Q0 1435 aa16.5■□□□□ 0.23
SLX1A-203ENST00000563616 HTRA3P83110 453 aa16.49■□□□□ 0.23
SLX1A-203ENST00000563616 KLRG1Q96E93 195 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms