RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
RPUSD1-204ENST00000563560 USHBP1Q8N6Y0 703 aa20.35■□□□□ 0.85
RPUSD1-204ENST00000563560 PLSCR1O15162 318 aa20.34■□□□□ 0.85
RPUSD1-204ENST00000563560 KCNQ2O43526 872 aa20.34■□□□□ 0.85
RPUSD1-204ENST00000563560 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
RPUSD1-204ENST00000563560 PROM2Q8N271 834 aa20.33■□□□□ 0.85
RPUSD1-204ENST00000563560 KNSTRNQ9Y448 316 aa20.33■□□□□ 0.85
RPUSD1-204ENST00000563560 LY75O60449 1722 aa20.33■□□□□ 0.84
RPUSD1-204ENST00000563560 EYA1Q99502 592 aa20.32■□□□□ 0.84
RPUSD1-204ENST00000563560 LRP5O75197 1615 aa20.31■□□□□ 0.84
RPUSD1-204ENST00000563560 TNNT2P45379 298 aaPredicted RBP20.31■□□□□ 0.84
RPUSD1-204ENST00000563560 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
RPUSD1-204ENST00000563560 ITGB4P16144 1822 aa20.31■□□□□ 0.84
RPUSD1-204ENST00000563560 KAT6BQ8WYB5 2073 aa20.31■□□□□ 0.84
RPUSD1-204ENST00000563560 ZCRB1Q8TBF4 217 aaKnown RBP20.3■□□□□ 0.84
RPUSD1-204ENST00000563560 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
RPUSD1-204ENST00000563560 PPM1GO15355 546 aaPredicted RBP20.28■□□□□ 0.84
RPUSD1-204ENST00000563560 MORC1Q86VD1 984 aa20.28■□□□□ 0.84
RPUSD1-204ENST00000563560 PLEKHG2Q9H7P9 1386 aa20.28■□□□□ 0.84
RPUSD1-204ENST00000563560 CASZ1Q86V15 1759 aa20.28■□□□□ 0.84
RPUSD1-204ENST00000563560 COL3A1P02461 1466 aaPredicted RBP20.27■□□□□ 0.84
RPUSD1-204ENST00000563560 ACSBG1Q96GR2 724 aa20.26■□□□□ 0.83
RPUSD1-204ENST00000563560 CYP27B1O15528 508 aa20.25■□□□□ 0.83
RPUSD1-204ENST00000563560 DDX54Q8TDD1 881 aaKnown RBP20.25■□□□□ 0.83
RPUSD1-204ENST00000563560 RAPGEF4Q8WZA2 1011 aa20.24■□□□□ 0.83
RPUSD1-204ENST00000563560 KDRP35968 1356 aa20.23■□□□□ 0.83
RPUSD1-204ENST00000563560 PSDA5PKW4 1024 aaPredicted RBP20.23■□□□□ 0.83
RPUSD1-204ENST00000563560 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
RPUSD1-204ENST00000563560 QSER1Q2KHR3 1735 aa20.22■□□□□ 0.83
RPUSD1-204ENST00000563560 IL13P35225 146 aa20.22■□□□□ 0.83
RPUSD1-204ENST00000563560 ANO8Q9HCE9 1232 aaPredicted RBP20.22■□□□□ 0.83
RPUSD1-204ENST00000563560 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
RPUSD1-204ENST00000563560 PCDH11XQ9BZA7 1347 aa20.22■□□□□ 0.83
RPUSD1-204ENST00000563560 PCDH11YQ9BZA8 1340 aa20.22■□□□□ 0.83
RPUSD1-204ENST00000563560 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
RPUSD1-204ENST00000563560 NKX1-1Q15270 411 aaPredicted RBP20.21■□□□□ 0.83
RPUSD1-204ENST00000563560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.21■□□□□ 0.83
RPUSD1-204ENST00000563560 TXNRD1Q16881 649 aa20.2■□□□□ 0.82
RPUSD1-204ENST00000563560 CC2D1BQ5T0F9 858 aaKnown RBP20.2■□□□□ 0.82
RPUSD1-204ENST00000563560 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
RPUSD1-204ENST00000563560 VIRMAQ69YN4 1812 aaKnown RBP20.19■□□□□ 0.82
RPUSD1-204ENST00000563560 PRIM1P49642 420 aaKnown RBP20.19■□□□□ 0.82
RPUSD1-204ENST00000563560 MTHFSP49914 203 aa20.19■□□□□ 0.82
RPUSD1-204ENST00000563560 AEBP1Q8IUX7 1158 aa20.17■□□□□ 0.82
RPUSD1-204ENST00000563560 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
RPUSD1-204ENST00000563560 ADAMTS7Q9UKP4 1686 aa20.16■□□□□ 0.82
RPUSD1-204ENST00000563560 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
RPUSD1-204ENST00000563560 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
RPUSD1-204ENST00000563560 C5P01031 1676 aa20.14■□□□□ 0.81
RPUSD1-204ENST00000563560 PHKG2P15735 406 aa20.14■□□□□ 0.81
RPUSD1-204ENST00000563560 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
RPUSD1-204ENST00000563560 SPG7Q9UQ90 795 aa20.12■□□□□ 0.81
RPUSD1-204ENST00000563560 ZNF831Q5JPB2 1677 aa20.11■□□□□ 0.81
RPUSD1-204ENST00000563560 NBPF14Q5TI25 921 aa20.11■□□□□ 0.81
RPUSD1-204ENST00000563560 PDGFDQ9GZP0 370 aaPredicted RBP20.11■□□□□ 0.81
RPUSD1-204ENST00000563560 SLC15A2Q16348 729 aa20.09■□□□□ 0.81
RPUSD1-204ENST00000563560 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
RPUSD1-204ENST00000563560 SLC27A3Q5K4L6 730 aa20.09■□□□□ 0.81
RPUSD1-204ENST00000563560 SULT6B1Q6IMI4 303 aa20.09■□□□□ 0.81
RPUSD1-204ENST00000563560 IFNL2Q8IZJ0 200 aa20.09■□□□□ 0.81
RPUSD1-204ENST00000563560 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
RPUSD1-204ENST00000563560 SYTL4Q96C24 671 aaPredicted RBP20.08■□□□□ 0.81
RPUSD1-204ENST00000563560 PIGBQ92521 554 aa20.07■□□□□ 0.8
RPUSD1-204ENST00000563560 CICQ96RK0 1608 aaPredicted RBP20.06■□□□□ 0.8
RPUSD1-204ENST00000563560 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
RPUSD1-204ENST00000563560 PPP2R1AP30153 589 aa20.06■□□□□ 0.8
RPUSD1-204ENST00000563560 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
RPUSD1-204ENST00000563560 KCNQ4P56696 695 aa20.05■□□□□ 0.8
RPUSD1-204ENST00000563560 AMOTQ4VCS5 1084 aa20.05■□□□□ 0.8
RPUSD1-204ENST00000563560 PALLDQ8WX93 1383 aa20.05■□□□□ 0.8
RPUSD1-204ENST00000563560 MRC1P22897 1456 aa20.05■□□□□ 0.8
RPUSD1-204ENST00000563560 C4BP0C0L5 1744 aa20.05■□□□□ 0.8
RPUSD1-204ENST00000563560 COL5A3P25940 1745 aaPredicted RBP20.05■□□□□ 0.8
RPUSD1-204ENST00000563560 SIPA1L3O60292 1781 aaPredicted RBP20.04■□□□□ 0.8
RPUSD1-204ENST00000563560 PLEKHO1Q53GL0 409 aaPredicted RBP20.04■□□□□ 0.8
RPUSD1-204ENST00000563560 MPRIPQ6WCQ1 1025 aa20.04■□□□□ 0.8
RPUSD1-204ENST00000563560 STK32BQ9NY57 414 aa20.02■□□□□ 0.8
RPUSD1-204ENST00000563560 ERVV-2B6SEH9 535 aa20.01■□□□□ 0.79
RPUSD1-204ENST00000563560 HMOX1P09601 288 aa20.01■□□□□ 0.79
RPUSD1-204ENST00000563560 CNGB1Q14028 1251 aaPredicted RBP20.01■□□□□ 0.79
RPUSD1-204ENST00000563560 ZNF530Q6P9A1 599 aaPredicted RBP20.01■□□□□ 0.79
RPUSD1-204ENST00000563560 DCAF5Q96JK2 942 aa20.01■□□□□ 0.79
RPUSD1-204ENST00000563560 TJP1Q07157 1748 aa20■□□□□ 0.79
RPUSD1-204ENST00000563560 SGIP1Q9BQI5 828 aa20■□□□□ 0.79
RPUSD1-204ENST00000563560 UBR2Q8IWV8 1755 aa19.99■□□□□ 0.79
RPUSD1-204ENST00000563560 PTGER2P43116 358 aa19.99■□□□□ 0.79
RPUSD1-204ENST00000563560 ATG3Q9NT62 314 aa19.99■□□□□ 0.79
RPUSD1-204ENST00000563560 CCNL1Q9UK58 526 aaPredicted RBP19.99■□□□□ 0.79
RPUSD1-204ENST00000563560 ASAP1Q9ULH1 1129 aa19.99■□□□□ 0.79
RPUSD1-204ENST00000563560 PNPLA7Q6ZV29 1317 aa19.99■□□□□ 0.79
RPUSD1-204ENST00000563560 HSP90AB1P08238 724 aaKnown RBP19.98■□□□□ 0.79
RPUSD1-204ENST00000563560 MTHFSDQ2M296 383 aaKnown RBP19.98■□□□□ 0.79
RPUSD1-204ENST00000563560 MYH14Q7Z406 1995 aaKnown RBP19.97■□□□□ 0.79
RPUSD1-204ENST00000563560 SLC4A9Q96Q91 983 aa19.97■□□□□ 0.79
RPUSD1-204ENST00000563560 TMOD3Q9NYL9 352 aa19.97■□□□□ 0.79
RPUSD1-204ENST00000563560 AKAP4Q5JQC9 854 aa19.96■□□□□ 0.79
RPUSD1-204ENST00000563560 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
RPUSD1-204ENST00000563560 SMARCC1Q92922 1105 aaPredicted RBP19.96■□□□□ 0.79
RPUSD1-204ENST00000563560 RSPH6AQ9H0K4 717 aa19.96■□□□□ 0.79
RPUSD1-204ENST00000563560 SPON1Q9HCB6 807 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms