RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 PARD3Q8TEW0 1356 aa38.61■■■■□ 3.77
NME3-203ENST00000563367 KCNQ2O43526 872 aa38.61■■■■□ 3.77
NME3-203ENST00000563367 EIF4A2Q14240 407 aaKnown RBP38.61■■■■□ 3.77
NME3-203ENST00000563367 EYA1Q99502 592 aa38.61■■■■□ 3.77
NME3-203ENST00000563367 CC2D1BQ5T0F9 858 aaKnown RBP38.6■■■■□ 3.77
NME3-203ENST00000563367 ACSBG1Q96GR2 724 aa38.6■■■■□ 3.77
NME3-203ENST00000563367 RGPD3A6NKT7 1758 aaPredicted RBP38.59■■■■□ 3.77
NME3-203ENST00000563367 RGPD4Q7Z3J3 1758 aa38.59■■■■□ 3.77
NME3-203ENST00000563367 NUP188Q5SRE5 1749 aa38.59■■■■□ 3.77
NME3-203ENST00000563367 TATP17735 454 aaPredicted RBP38.58■■■■□ 3.77
NME3-203ENST00000563367 PLSCR1O15162 318 aa38.55■■■■□ 3.76
NME3-203ENST00000563367 BTAF1O14981 1849 aa38.54■■■■□ 3.76
NME3-203ENST00000563367 NPC1L1Q9UHC9 1359 aa38.53■■■■□ 3.76
NME3-203ENST00000563367 PKD1L3Q7Z443 1732 aa38.52■■■■□ 3.76
NME3-203ENST00000563367 DOT1LQ8TEK3 1739 aa38.52■■■■□ 3.76
NME3-203ENST00000563367 CNGB1Q14028 1251 aaPredicted RBP38.51■■■■□ 3.76
NME3-203ENST00000563367 PSDA5PKW4 1024 aaPredicted RBP38.49■■■■□ 3.75
NME3-203ENST00000563367 IGSF1Q8N6C5 1336 aa38.46■■■■□ 3.75
NME3-203ENST00000563367 MTHFSP49914 203 aa38.46■■■■□ 3.75
NME3-203ENST00000563367 PROM2Q8N271 834 aa38.46■■■■□ 3.75
NME3-203ENST00000563367 PCDH11XQ9BZA7 1347 aa38.44■■■■□ 3.74
NME3-203ENST00000563367 PCDH11YQ9BZA8 1340 aa38.44■■■■□ 3.74
NME3-203ENST00000563367 CYP27B1O15528 508 aa38.43■■■■□ 3.74
NME3-203ENST00000563367 R3HDM1Q15032 1099 aaKnown RBP38.42■■■■□ 3.74
NME3-203ENST00000563367 PRIM1P49642 420 aaKnown RBP38.41■■■■□ 3.74
NME3-203ENST00000563367 IL13P35225 146 aa38.4■■■■□ 3.74
NME3-203ENST00000563367 TXNRD1Q16881 649 aa38.38■■■■□ 3.73
NME3-203ENST00000563367 SYTL4Q96C24 671 aaPredicted RBP38.38■■■■□ 3.73
NME3-203ENST00000563367 SPG7Q9UQ90 795 aa38.37■■■■□ 3.73
NME3-203ENST00000563367 TOGARAM1Q9Y4F4 1720 aa38.36■■■■□ 3.73
NME3-203ENST00000563367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.36■■■■□ 3.73
NME3-203ENST00000563367 NBPF14Q5TI25 921 aa38.35■■■■□ 3.73
NME3-203ENST00000563367 AEBP1Q8IUX7 1158 aa38.35■■■■□ 3.73
NME3-203ENST00000563367 ITGB4P16144 1822 aa38.34■■■■□ 3.73
NME3-203ENST00000563367 SRCAPQ6ZRS2 3230 aa38.33■■■■□ 3.73
NME3-203ENST00000563367 SULT6B1Q6IMI4 303 aa38.3■■■■□ 3.72
NME3-203ENST00000563367 ANO8Q9HCE9 1232 aaPredicted RBP38.3■■■■□ 3.72
NME3-203ENST00000563367 NKX1-1Q15270 411 aaPredicted RBP38.29■■■■□ 3.72
NME3-203ENST00000563367 PLEKHG2Q9H7P9 1386 aa38.28■■■■□ 3.72
NME3-203ENST00000563367 LY75O60449 1722 aa38.27■■■■□ 3.72
NME3-203ENST00000563367 KDRP35968 1356 aa38.27■■■■□ 3.72
NME3-203ENST00000563367 COL3A1P02461 1466 aaPredicted RBP38.27■■■■□ 3.72
NME3-203ENST00000563367 PHKG2P15735 406 aa38.26■■■■□ 3.72
NME3-203ENST00000563367 DIAPH1O60610 1272 aaKnown RBP38.25■■■■□ 3.71
NME3-203ENST00000563367 IFNL2Q8IZJ0 200 aa38.25■■■■□ 3.71
NME3-203ENST00000563367 LRRC4BQ9NT99 713 aa38.23■■■■□ 3.71
NME3-203ENST00000563367 PAPPAQ13219 1627 aa38.23■■■■□ 3.71
NME3-203ENST00000563367 PLEKHO1Q53GL0 409 aaPredicted RBP38.22■■■■□ 3.71
NME3-203ENST00000563367 MPRIPQ6WCQ1 1025 aa38.21■■■■□ 3.71
NME3-203ENST00000563367 LRP5O75197 1615 aa38.2■■■■□ 3.7
NME3-203ENST00000563367 PPP2R1AP30153 589 aa38.19■■■■□ 3.7
NME3-203ENST00000563367 ZEB1P37275 1124 aaPredicted RBP38.19■■■■□ 3.7
NME3-203ENST00000563367 HMOX1P09601 288 aa38.18■■■■□ 3.7
NME3-203ENST00000563367 AMOTQ4VCS5 1084 aa38.18■■■■□ 3.7
NME3-203ENST00000563367 KCNQ4P56696 695 aa38.16■■■■□ 3.7
NME3-203ENST00000563367 ZNF530Q6P9A1 599 aaPredicted RBP38.16■■■■□ 3.7
NME3-203ENST00000563367 SLC27A3Q5K4L6 730 aa38.15■■■■□ 3.7
NME3-203ENST00000563367 PIGBQ92521 554 aa38.15■■■■□ 3.7
NME3-203ENST00000563367 STK32BQ9NY57 414 aa38.15■■■■□ 3.7
NME3-203ENST00000563367 SLC15A2Q16348 729 aa38.14■■■■□ 3.7
NME3-203ENST00000563367 CASZ1Q86V15 1759 aa38.14■■■■□ 3.7
NME3-203ENST00000563367 DDX10Q13206 875 aaKnown RBP38.13■■■■□ 3.69
NME3-203ENST00000563367 PDGFDQ9GZP0 370 aaPredicted RBP38.11■■■■□ 3.69
NME3-203ENST00000563367 U2SURPO15042 1029 aaKnown RBP38.09■■■■□ 3.69
NME3-203ENST00000563367 ZNF827Q17R98 1081 aa38.09■■■■□ 3.69
NME3-203ENST00000563367 KDM6AO15550 1401 aaPredicted RBP38.09■■■■□ 3.69
NME3-203ENST00000563367 CFAP53Q96M91 514 aa38.08■■■■□ 3.69
NME3-203ENST00000563367 TMOD3Q9NYL9 352 aa38.08■■■■□ 3.69
NME3-203ENST00000563367 CCNL1Q9UK58 526 aaPredicted RBP38.08■■■■□ 3.69
NME3-203ENST00000563367 PALLDQ8WX93 1383 aa38.07■■■■□ 3.69
NME3-203ENST00000563367 HSP90AB1P08238 724 aaKnown RBP38.07■■■■□ 3.68
NME3-203ENST00000563367 DCAF5Q96JK2 942 aa38.07■■■■□ 3.68
NME3-203ENST00000563367 C1orf141Q5JVX7 400 aa38.06■■■■□ 3.68
NME3-203ENST00000563367 VIRMAQ69YN4 1812 aaKnown RBP38.05■■■■□ 3.68
NME3-203ENST00000563367 TAF1LQ8IZX4 1826 aa38.05■■■■□ 3.68
NME3-203ENST00000563367 AKT1S1Q96B36 256 aa38.05■■■■□ 3.68
NME3-203ENST00000563367 TUBGCP6Q96RT7 1819 aa38.05■■■■□ 3.68
NME3-203ENST00000563367 SCN11AQ9UI33 1791 aa38.04■■■■□ 3.68
NME3-203ENST00000563367 ERVV-2B6SEH9 535 aa38.03■■■■□ 3.68
NME3-203ENST00000563367 SMARCC1Q92922 1105 aaPredicted RBP38.03■■■■□ 3.68
NME3-203ENST00000563367 C5P01031 1676 aa38.02■■■■□ 3.68
NME3-203ENST00000563367 ASAP1Q9ULH1 1129 aa38.01■■■■□ 3.68
NME3-203ENST00000563367 QSER1Q2KHR3 1735 aa38.01■■■■□ 3.67
NME3-203ENST00000563367 MTHFSDQ2M296 383 aaKnown RBP38■■■■□ 3.67
NME3-203ENST00000563367 AKAP4Q5JQC9 854 aa37.98■■■■□ 3.67
NME3-203ENST00000563367 ATG3Q9NT62 314 aa37.97■■■■□ 3.67
NME3-203ENST00000563367 ZBTB7AO95365 584 aa37.94■■■■□ 3.66
NME3-203ENST00000563367 CABP4P57796 275 aa37.94■■■■□ 3.66
NME3-203ENST00000563367 SPON1Q9HCB6 807 aa37.94■■■■□ 3.66
NME3-203ENST00000563367 NUDCQ9Y266 331 aa37.94■■■■□ 3.66
NME3-203ENST00000563367 RSPH6AQ9H0K4 717 aa37.92■■■■□ 3.66
NME3-203ENST00000563367 LGR6Q9HBX8 967 aa37.92■■■■□ 3.66
NME3-203ENST00000563367 LOC102724428A0A0B4J2F2 783 aa37.91■■■■□ 3.66
NME3-203ENST00000563367 SIK1P57059 783 aa37.91■■■■□ 3.66
NME3-203ENST00000563367 TFCP2L1Q9NZI6 479 aa37.91■■■■□ 3.66
NME3-203ENST00000563367 ADAMTS7Q9UKP4 1686 aa37.91■■■■□ 3.66
NME3-203ENST00000563367 U2AF1L5P0DN76 240 aaPredicted RBP37.9■■■■□ 3.66
NME3-203ENST00000563367 U2AF1Q01081 240 aaKnown RBP eCLIP37.9■■■■□ 3.66
NME3-203ENST00000563367 NFATC2IPQ8NCF5 419 aa37.9■■■■□ 3.66
NME3-203ENST00000563367 PNPLA7Q6ZV29 1317 aa37.89■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms