RNA–Protein interactions for RNA: ENST00000563340.1

ATP2C2-204, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 3

Gene ATP2C2, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-204ENST00000563340 NSD2O96028 1365 aa19.14■□□□□ 0.65
ATP2C2-204ENST00000563340 ZCRB1Q8TBF4 217 aaKnown RBP19.11■□□□□ 0.65
ATP2C2-204ENST00000563340 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
ATP2C2-204ENST00000563340 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
ATP2C2-204ENST00000563340 USP47Q96K76 1375 aa19.1■□□□□ 0.65
ATP2C2-204ENST00000563340 CD163L1Q9NR16 1453 aa19.09■□□□□ 0.65
ATP2C2-204ENST00000563340 TUBGCP6Q96RT7 1819 aa19.09■□□□□ 0.65
ATP2C2-204ENST00000563340 HMGB2P26583 209 aaKnown RBP19.09■□□□□ 0.65
ATP2C2-204ENST00000563340 HDGFL2Q7Z4V5 671 aaPredicted RBP19.09■□□□□ 0.65
ATP2C2-204ENST00000563340 FLAD1Q8NFF5 587 aa19.09■□□□□ 0.65
ATP2C2-204ENST00000563340 USP54Q70EL1 1684 aa19.08■□□□□ 0.65
ATP2C2-204ENST00000563340 TMC1Q8TDI8 760 aa19.08■□□□□ 0.64
ATP2C2-204ENST00000563340 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
ATP2C2-204ENST00000563340 MON2Q7Z3U7 1717 aa19.07■□□□□ 0.64
ATP2C2-204ENST00000563340 EDC4Q6P2E9 1401 aaKnown RBP19.07■□□□□ 0.64
ATP2C2-204ENST00000563340 LTN1O94822 1766 aa19.06■□□□□ 0.64
ATP2C2-204ENST00000563340 KIF3CO14782 793 aa19.06■□□□□ 0.64
ATP2C2-204ENST00000563340 LY75O60449 1722 aa19.05■□□□□ 0.64
ATP2C2-204ENST00000563340 APLP1P51693 650 aa19.04■□□□□ 0.64
ATP2C2-204ENST00000563340 TERF2IPQ9NYB0 399 aa19.04■□□□□ 0.64
ATP2C2-204ENST00000563340 HOXC9P31274 260 aa19.03■□□□□ 0.64
ATP2C2-204ENST00000563340 MAP3K19Q56UN5 1328 aa19.02■□□□□ 0.64
ATP2C2-204ENST00000563340 IGSF1Q8N6C5 1336 aa19.02■□□□□ 0.64
ATP2C2-204ENST00000563340 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
ATP2C2-204ENST00000563340 MEGF6O75095 1541 aa19.01■□□□□ 0.63
ATP2C2-204ENST00000563340 DOT1LQ8TEK3 1739 aa19.01■□□□□ 0.63
ATP2C2-204ENST00000563340 AMPHP49418 695 aa19.01■□□□□ 0.63
ATP2C2-204ENST00000563340 DNAJC5GQ8N7S2 189 aa19.01■□□□□ 0.63
ATP2C2-204ENST00000563340 WWC3Q9ULE0 1092 aa19■□□□□ 0.63
ATP2C2-204ENST00000563340 A0A1W2PP64 1363 aa19■□□□□ 0.63
ATP2C2-204ENST00000563340 FAM208AQ9UK61 1670 aaKnown RBP18.98■□□□□ 0.63
ATP2C2-204ENST00000563340 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
ATP2C2-204ENST00000563340 NBPF6Q5VWK0 638 aa18.98■□□□□ 0.63
ATP2C2-204ENST00000563340 COG3Q96JB2 828 aa18.98■□□□□ 0.63
ATP2C2-204ENST00000563340 AK7Q96M32 723 aa18.98■□□□□ 0.63
ATP2C2-204ENST00000563340 NBPF4Q96M43 638 aa18.98■□□□□ 0.63
ATP2C2-204ENST00000563340 TOMM70O94826 608 aa18.97■□□□□ 0.63
ATP2C2-204ENST00000563340 FBLN1P23142 703 aa18.97■□□□□ 0.63
ATP2C2-204ENST00000563340 AMIGO3Q86WK7 504 aa18.97■□□□□ 0.63
ATP2C2-204ENST00000563340 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
ATP2C2-204ENST00000563340 PUS7Q96PZ0 661 aaKnown RBP18.97■□□□□ 0.63
ATP2C2-204ENST00000563340 MPRIPQ6WCQ1 1025 aa18.96■□□□□ 0.63
ATP2C2-204ENST00000563340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.95■□□□□ 0.62
ATP2C2-204ENST00000563340 SMARCC1Q92922 1105 aaPredicted RBP18.95■□□□□ 0.62
ATP2C2-204ENST00000563340 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
ATP2C2-204ENST00000563340 PHF14O94880 888 aa18.94■□□□□ 0.62
ATP2C2-204ENST00000563340 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
ATP2C2-204ENST00000563340 USHBP1Q8N6Y0 703 aa18.94■□□□□ 0.62
ATP2C2-204ENST00000563340 PCDH11XQ9BZA7 1347 aa18.94■□□□□ 0.62
ATP2C2-204ENST00000563340 PCDH11YQ9BZA8 1340 aa18.94■□□□□ 0.62
ATP2C2-204ENST00000563340 C5P01031 1676 aa18.93■□□□□ 0.62
ATP2C2-204ENST00000563340 CARD11Q9BXL7 1154 aa18.93■□□□□ 0.62
ATP2C2-204ENST00000563340 NSD3Q9BZ95 1437 aa18.92■□□□□ 0.62
ATP2C2-204ENST00000563340 SSFA2P28290 1259 aa18.92■□□□□ 0.62
ATP2C2-204ENST00000563340 NEUROD1Q13562 356 aa18.92■□□□□ 0.62
ATP2C2-204ENST00000563340 SMIM5Q71RC9 77 aa18.92■□□□□ 0.62
ATP2C2-204ENST00000563340 RTL1A6NKG5 1358 aa18.92■□□□□ 0.62
ATP2C2-204ENST00000563340 CYP27B1O15528 508 aa18.9■□□□□ 0.62
ATP2C2-204ENST00000563340 RRS1Q15050 365 aaKnown RBP18.9■□□□□ 0.62
ATP2C2-204ENST00000563340 PIGBQ92521 554 aa18.89■□□□□ 0.61
ATP2C2-204ENST00000563340 COL13A1Q5TAT6 717 aaPredicted RBP18.88■□□□□ 0.61
ATP2C2-204ENST00000563340 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
ATP2C2-204ENST00000563340 C4BP0C0L5 1744 aa18.88■□□□□ 0.61
ATP2C2-204ENST00000563340 TGFB2P61812 414 aa18.87■□□□□ 0.61
ATP2C2-204ENST00000563340 LINC00116Q8NCU8 138 aa18.87■□□□□ 0.61
ATP2C2-204ENST00000563340 RBM46Q8TBY0 533 aaKnown RBP18.87■□□□□ 0.61
ATP2C2-204ENST00000563340 CICQ96RK0 1608 aaPredicted RBP18.87■□□□□ 0.61
ATP2C2-204ENST00000563340 NMRK2Q9NPI5 230 aa18.87■□□□□ 0.61
ATP2C2-204ENST00000563340 PCNTO95613 3336 aa18.87■□□□□ 0.61
ATP2C2-204ENST00000563340 LOC102724428A0A0B4J2F2 783 aa18.86■□□□□ 0.61
ATP2C2-204ENST00000563340 MMP10P09238 476 aa18.86■□□□□ 0.61
ATP2C2-204ENST00000563340 SIK1P57059 783 aa18.86■□□□□ 0.61
ATP2C2-204ENST00000563340 JMYQ8N9B5 988 aa18.86■□□□□ 0.61
ATP2C2-204ENST00000563340 KLRG1Q96E93 195 aa18.86■□□□□ 0.61
ATP2C2-204ENST00000563340 BCS1LQ9Y276 419 aa18.86■□□□□ 0.61
ATP2C2-204ENST00000563340 TAF1LQ8IZX4 1826 aa18.86■□□□□ 0.61
ATP2C2-204ENST00000563340 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
ATP2C2-204ENST00000563340 RGPD2P0DJD1 1756 aa18.85■□□□□ 0.61
ATP2C2-204ENST00000563340 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
ATP2C2-204ENST00000563340 GNPATO15228 680 aa18.84■□□□□ 0.61
ATP2C2-204ENST00000563340 NKX1-1Q15270 411 aaPredicted RBP18.84■□□□□ 0.61
ATP2C2-204ENST00000563340 HSP90AB2PQ58FF8 381 aa18.84■□□□□ 0.61
ATP2C2-204ENST00000563340 TOGARAM1Q9Y4F4 1720 aa18.83■□□□□ 0.61
ATP2C2-204ENST00000563340 INSRP06213 1382 aa18.83■□□□□ 0.61
ATP2C2-204ENST00000563340 A0A0G2JLW4 131 aa18.83■□□□□ 0.6
ATP2C2-204ENST00000563340 FYB1O15117 783 aa18.83■□□□□ 0.6
ATP2C2-204ENST00000563340 HTRA3P83110 453 aa18.82■□□□□ 0.6
ATP2C2-204ENST00000563340 FSTL1Q12841 308 aa18.82■□□□□ 0.6
ATP2C2-204ENST00000563340 C16orf71Q8IYS4 520 aaPredicted RBP18.82■□□□□ 0.6
ATP2C2-204ENST00000563340 GGNBP2Q9H3C7 697 aa18.82■□□□□ 0.6
ATP2C2-204ENST00000563340 UBR3Q6ZT12 1888 aa18.82■□□□□ 0.6
ATP2C2-204ENST00000563340 ITPK1Q13572 414 aa18.81■□□□□ 0.6
ATP2C2-204ENST00000563340 TESK2Q96S53 571 aa18.81■□□□□ 0.6
ATP2C2-204ENST00000563340 CAPN15O75808 1086 aa18.8■□□□□ 0.6
ATP2C2-204ENST00000563340 ATP6V1AP38606 617 aa18.8■□□□□ 0.6
ATP2C2-204ENST00000563340 NLGN1Q8N2Q7 840 aa18.8■□□□□ 0.6
ATP2C2-204ENST00000563340 SLC24A1O60721 1099 aa18.79■□□□□ 0.6
ATP2C2-204ENST00000563340 FCHSD2O94868 740 aa18.79■□□□□ 0.6
ATP2C2-204ENST00000563340 TMF1P82094 1093 aa18.79■□□□□ 0.6
ATP2C2-204ENST00000563340 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms