RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SETDB1Q15047 1291 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 LONRF1Q17RB8 773 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 NBPF9Q3BBW0 867 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 SYCP2LQ5T4T6 812 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 EFCAB2Q5VUJ9 269 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 CYB5RLQ6IPT4 315 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 CEP120Q8N960 986 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 BANK1Q8NDB2 785 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 ARPC5LQ9BPX5 153 aa6.02□□□□□ -1.45
SMG1-207ENST00000563235 DIS3Q9Y2L1 958 aaKnown RBP6.02□□□□□ -1.45
SMG1-207ENST00000563235 FGAP02671 866 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 PDGFRBP09619 1106 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 TGFB3P10600 412 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 HSD3B2P26439 372 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 NEXNQ0ZGT2 675 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 C1QTNF12Q5T7M4 302 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 CAPN10Q9HC96 672 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 ACBD3Q9H3P7 528 aa6.01□□□□□ -1.45
SMG1-207ENST00000563235 ZCCHC6Q5VYS8 1495 aaKnown RBP6.01□□□□□ -1.45
SMG1-207ENST00000563235 DYTNA2CJ06 578 aa6□□□□□ -1.45
SMG1-207ENST00000563235 TDO2P48775 406 aa6□□□□□ -1.45
SMG1-207ENST00000563235 KANK3Q6NY19 840 aa6□□□□□ -1.45
SMG1-207ENST00000563235 TNFRSF10BO14763 440 aa6□□□□□ -1.45
SMG1-207ENST00000563235 SCAMP3O14828 347 aaKnown RBP6□□□□□ -1.45
SMG1-207ENST00000563235 FAM200BP0CF97 657 aa6□□□□□ -1.45
SMG1-207ENST00000563235 IRX3P78415 501 aaPredicted RBP6□□□□□ -1.45
SMG1-207ENST00000563235 MRPL58Q14197 206 aaKnown RBP6□□□□□ -1.45
SMG1-207ENST00000563235 MFSD10Q14728 455 aa6□□□□□ -1.45
SMG1-207ENST00000563235 CDC5LQ99459 802 aaKnown RBP6□□□□□ -1.45
SMG1-207ENST00000563235 NUTM2FA1L443 756 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 IGHDP01880 384 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 PYGBP11216 843 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 RRM1P23921 792 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 KCTD2Q14681 263 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 MYSM1Q5VVJ2 828 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 CC2D1AQ6P1N0 951 aaPredicted RBP5.99□□□□□ -1.45
SMG1-207ENST00000563235 CEP126Q9P2H0 1117 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 VDRP11473 427 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 GNALP38405 381 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 SAFB2Q14151 953 aaKnown RBP eCLIP5.99□□□□□ -1.45
SMG1-207ENST00000563235 SKAP1Q86WV1 359 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 PHF12Q96QT6 1004 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 FEZ2Q9UHY8 353 aaPredicted RBP5.99□□□□□ -1.45
SMG1-207ENST00000563235 CCDC61Q9Y6R9 512 aa5.99□□□□□ -1.45
SMG1-207ENST00000563235 GNPATO15228 680 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 RBL2Q08999 1139 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 SIM2Q14190 667 aaPredicted RBP5.98□□□□□ -1.45
SMG1-207ENST00000563235 ASTLQ6HA08 431 aaPredicted RBP5.98□□□□□ -1.45
SMG1-207ENST00000563235 WDR75Q8IWA0 830 aaKnown RBP5.98□□□□□ -1.45
SMG1-207ENST00000563235 RSPH1Q8WYR4 309 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 OSBPL2Q9H1P3 480 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 TIMM44O43615 452 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 C10orf62Q5T681 223 aaPredicted RBP5.98□□□□□ -1.45
SMG1-207ENST00000563235 ANKRD23Q86SG2 305 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 BEGAINQ9BUH8 593 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.98□□□□□ -1.45
SMG1-207ENST00000563235 AVENQ9NQS1 362 aaPredicted RBP5.98□□□□□ -1.45
SMG1-207ENST00000563235 PEG3Q9GZU2 1588 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 MTA1Q13330 715 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 SVIPQ8NHG7 77 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 FAM161BQ96MY7 647 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 NAP1L4Q99733 375 aaKnown RBP5.98□□□□□ -1.45
SMG1-207ENST00000563235 CASS4Q9NQ75 786 aa5.98□□□□□ -1.45
SMG1-207ENST00000563235 SETD1BQ9UPS6 1966 aaKnown RBP5.97□□□□□ -1.45
SMG1-207ENST00000563235 VIL1P09327 827 aaKnown RBP5.97□□□□□ -1.45
SMG1-207ENST00000563235 SLC39A7Q92504 469 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 C8orf48Q96LL4 319 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 ZHX3Q9H4I2 956 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 EID1Q9Y6B2 187 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 DNAJC6O75061 913 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 SF3B2Q13435 895 aaKnown RBP5.97□□□□□ -1.45
SMG1-207ENST00000563235 B4GALNT3Q6L9W6 998 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 USP48Q86UV5 1035 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 OTUD5Q96G74 571 aa5.97□□□□□ -1.45
SMG1-207ENST00000563235 MYCBPQ99417 103 aaPredicted RBP5.97□□□□□ -1.45
SMG1-207ENST00000563235 DPYSL4O14531 572 aa5.96□□□□□ -1.45
SMG1-207ENST00000563235 GPR37L1O60883 481 aa5.96□□□□□ -1.45
SMG1-207ENST00000563235 CC2D1BQ5T0F9 858 aaKnown RBP5.96□□□□□ -1.45
SMG1-207ENST00000563235 DRC7Q8IY82 874 aa5.96□□□□□ -1.45
SMG1-207ENST00000563235 AS3MTQ9HBK9 375 aa5.96□□□□□ -1.45
SMG1-207ENST00000563235 MAFBQ9Y5Q3 323 aaPredicted RBP5.96□□□□□ -1.45
SMG1-207ENST00000563235 HECW2Q9P2P5 1572 aa5.96□□□□□ -1.46
SMG1-207ENST00000563235 IFRD1O00458 451 aaPredicted RBP5.96□□□□□ -1.46
SMG1-207ENST00000563235 NDUFV2P19404 249 aa5.96□□□□□ -1.46
SMG1-207ENST00000563235 POU5F1BQ06416 359 aa5.96□□□□□ -1.46
SMG1-207ENST00000563235 SLFNL1Q499Z3 407 aa5.96□□□□□ -1.46
SMG1-207ENST00000563235 TMUB1Q9BVT8 246 aa5.96□□□□□ -1.46
SMG1-207ENST00000563235 ISY1Q9ULR0 285 aaKnown RBP5.96□□□□□ -1.46
SMG1-207ENST00000563235 HIP1RO75146 1068 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 VAC14Q08AM6 782 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 TRIM44Q96DX7 344 aaPredicted RBP5.95□□□□□ -1.46
SMG1-207ENST00000563235 PHOX2BQ99453 314 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 CRISPLD2Q9H0B8 497 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 FOSP01100 380 aaPredicted RBP5.95□□□□□ -1.46
SMG1-207ENST00000563235 INTUQ9ULD6 942 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 SLC45A1Q9Y2W3 748 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 CEP164Q9UPV0 1460 aa5.95□□□□□ -1.46
SMG1-207ENST00000563235 TCERG1O14776 1098 aaKnown RBP5.95□□□□□ -1.46
SMG1-207ENST00000563235 ATMINO43313 823 aaPredicted RBP5.95□□□□□ -1.46
SMG1-207ENST00000563235 CLK2P49760 499 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms