RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 C5P01031 1676 aa18.79■□□□□ 0.6
SPG7-207ENST00000563218 MAP3K19Q56UN5 1328 aa18.79■□□□□ 0.6
SPG7-207ENST00000563218 ST20-MTHFSA0A0A6YYL1 179 aa18.79■□□□□ 0.6
SPG7-207ENST00000563218 DDX54Q8TDD1 881 aaKnown RBP18.79■□□□□ 0.6
SPG7-207ENST00000563218 NSD2O96028 1365 aa18.79■□□□□ 0.6
SPG7-207ENST00000563218 KCNQ4P56696 695 aa18.78■□□□□ 0.6
SPG7-207ENST00000563218 HOXC9P31274 260 aa18.77■□□□□ 0.6
SPG7-207ENST00000563218 ZNF784Q8NCA9 323 aaPredicted RBP18.76■□□□□ 0.59
SPG7-207ENST00000563218 AKT1S1Q96B36 256 aa18.76■□□□□ 0.59
SPG7-207ENST00000563218 PUS7Q96PZ0 661 aaKnown RBP18.76■□□□□ 0.59
SPG7-207ENST00000563218 ANKRD36BQ8N2N9 1353 aa18.74■□□□□ 0.59
SPG7-207ENST00000563218 RRS1Q15050 365 aaKnown RBP18.74■□□□□ 0.59
SPG7-207ENST00000563218 COG3Q96JB2 828 aa18.74■□□□□ 0.59
SPG7-207ENST00000563218 ARXQ96QS3 562 aa18.74■□□□□ 0.59
SPG7-207ENST00000563218 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
SPG7-207ENST00000563218 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
SPG7-207ENST00000563218 MAP2P11137 1827 aaKnown RBP18.73■□□□□ 0.59
SPG7-207ENST00000563218 USHBP1Q8N6Y0 703 aa18.73■□□□□ 0.59
SPG7-207ENST00000563218 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
SPG7-207ENST00000563218 ANKRD26Q9UPS8 1709 aa18.73■□□□□ 0.59
SPG7-207ENST00000563218 AMPHP49418 695 aa18.72■□□□□ 0.59
SPG7-207ENST00000563218 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
SPG7-207ENST00000563218 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
SPG7-207ENST00000563218 MAP3K5Q99683 1374 aa18.71■□□□□ 0.59
SPG7-207ENST00000563218 GGNBP2Q9H3C7 697 aa18.7■□□□□ 0.58
SPG7-207ENST00000563218 C1QTNF8P60827 252 aa18.69■□□□□ 0.58
SPG7-207ENST00000563218 SLC27A3Q5K4L6 730 aa18.69■□□□□ 0.58
SPG7-207ENST00000563218 NBPF6Q5VWK0 638 aa18.69■□□□□ 0.58
SPG7-207ENST00000563218 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
SPG7-207ENST00000563218 NBPF4Q96M43 638 aa18.69■□□□□ 0.58
SPG7-207ENST00000563218 UBR3Q6ZT12 1888 aa18.69■□□□□ 0.58
SPG7-207ENST00000563218 USP47Q96K76 1375 aa18.68■□□□□ 0.58
SPG7-207ENST00000563218 FYB1O15117 783 aa18.68■□□□□ 0.58
SPG7-207ENST00000563218 KLHL34Q8N239 644 aa18.68■□□□□ 0.58
SPG7-207ENST00000563218 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
SPG7-207ENST00000563218 NLGN2Q8NFZ4 835 aa18.65■□□□□ 0.58
SPG7-207ENST00000563218 TFCP2L1Q9NZI6 479 aa18.65■□□□□ 0.58
SPG7-207ENST00000563218 C4BP0C0L5 1744 aa18.65■□□□□ 0.58
SPG7-207ENST00000563218 CCNL1Q9UK58 526 aaPredicted RBP18.64■□□□□ 0.57
SPG7-207ENST00000563218 SMG6Q86US8 1419 aaKnown RBP18.64■□□□□ 0.57
SPG7-207ENST00000563218 HSP90AB2PQ58FF8 381 aa18.63■□□□□ 0.57
SPG7-207ENST00000563218 SLC16A10Q8TF71 515 aa18.63■□□□□ 0.57
SPG7-207ENST00000563218 TMF1P82094 1093 aa18.62■□□□□ 0.57
SPG7-207ENST00000563218 INSRP06213 1382 aa18.61■□□□□ 0.57
SPG7-207ENST00000563218 FLT4P35916 1363 aa18.61■□□□□ 0.57
SPG7-207ENST00000563218 POLD1P28340 1107 aa18.61■□□□□ 0.57
SPG7-207ENST00000563218 GPR162Q16538 588 aa18.61■□□□□ 0.57
SPG7-207ENST00000563218 COL23A1Q86Y22 540 aaPredicted RBP18.61■□□□□ 0.57
SPG7-207ENST00000563218 PELP1Q8IZL8 1130 aaKnown RBP18.61■□□□□ 0.57
SPG7-207ENST00000563218 NSD3Q9BZ95 1437 aa18.6■□□□□ 0.57
SPG7-207ENST00000563218 MSL1Q68DK7 614 aa18.6■□□□□ 0.57
SPG7-207ENST00000563218 RAPGEF4Q8WZA2 1011 aa18.59■□□□□ 0.57
SPG7-207ENST00000563218 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
SPG7-207ENST00000563218 EMILIN1Q9Y6C2 1016 aa18.59■□□□□ 0.57
SPG7-207ENST00000563218 NCAPD2Q15021 1401 aa18.58■□□□□ 0.57
SPG7-207ENST00000563218 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
SPG7-207ENST00000563218 PALLDQ8WX93 1383 aa18.57■□□□□ 0.56
SPG7-207ENST00000563218 CGNL1Q0VF96 1302 aa18.57■□□□□ 0.56
SPG7-207ENST00000563218 PCDH11XQ9BZA7 1347 aa18.57■□□□□ 0.56
SPG7-207ENST00000563218 PCDH11YQ9BZA8 1340 aa18.57■□□□□ 0.56
SPG7-207ENST00000563218 CYP27B1O15528 508 aa18.57■□□□□ 0.56
SPG7-207ENST00000563218 MSH5O43196 834 aa18.57■□□□□ 0.56
SPG7-207ENST00000563218 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
SPG7-207ENST00000563218 AMIGO3Q86WK7 504 aa18.56■□□□□ 0.56
SPG7-207ENST00000563218 SMIM5Q71RC9 77 aa18.55■□□□□ 0.56
SPG7-207ENST00000563218 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
SPG7-207ENST00000563218 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
SPG7-207ENST00000563218 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
SPG7-207ENST00000563218 COL5A3P25940 1745 aaPredicted RBP18.52■□□□□ 0.56
SPG7-207ENST00000563218 KIAA1551Q9HCM1 1747 aa18.52■□□□□ 0.56
SPG7-207ENST00000563218 VIRMAQ69YN4 1812 aaKnown RBP18.51■□□□□ 0.55
SPG7-207ENST00000563218 N4BP2Q86UW6 1770 aaPredicted RBP18.51■□□□□ 0.55
SPG7-207ENST00000563218 GIGYF1O75420 1035 aaPredicted RBP18.51■□□□□ 0.55
SPG7-207ENST00000563218 PPM1GO15355 546 aaPredicted RBP18.5■□□□□ 0.55
SPG7-207ENST00000563218 KIF13BQ9NQT8 1826 aa18.5■□□□□ 0.55
SPG7-207ENST00000563218 PIGBQ92521 554 aa18.49■□□□□ 0.55
SPG7-207ENST00000563218 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
SPG7-207ENST00000563218 PHF14O94880 888 aa18.47■□□□□ 0.55
SPG7-207ENST00000563218 CDCA8Q53HL2 280 aa18.47■□□□□ 0.55
SPG7-207ENST00000563218 EYA1Q99502 592 aa18.47■□□□□ 0.55
SPG7-207ENST00000563218 MYH14Q7Z406 1995 aaKnown RBP18.47■□□□□ 0.55
SPG7-207ENST00000563218 LINC00116Q8NCU8 138 aa18.46■□□□□ 0.55
SPG7-207ENST00000563218 CEP350Q5VT06 3117 aa18.45■□□□□ 0.54
SPG7-207ENST00000563218 ZNF831Q5JPB2 1677 aa18.45■□□□□ 0.54
SPG7-207ENST00000563218 NKX1-1Q15270 411 aaPredicted RBP18.45■□□□□ 0.54
SPG7-207ENST00000563218 AK7Q96M32 723 aa18.45■□□□□ 0.54
SPG7-207ENST00000563218 WWC3Q9ULE0 1092 aa18.45■□□□□ 0.54
SPG7-207ENST00000563218 BRCA1P38398 1863 aaKnown RBP18.45■□□□□ 0.54
SPG7-207ENST00000563218 WASHC2AQ641Q2 1341 aa18.45■□□□□ 0.54
SPG7-207ENST00000563218 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
SPG7-207ENST00000563218 POLKQ9UBT6 870 aa18.44■□□□□ 0.54
SPG7-207ENST00000563218 ITPK1Q13572 414 aa18.43■□□□□ 0.54
SPG7-207ENST00000563218 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
SPG7-207ENST00000563218 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
SPG7-207ENST00000563218 ASAP1Q9ULH1 1129 aa18.43■□□□□ 0.54
SPG7-207ENST00000563218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.42■□□□□ 0.54
SPG7-207ENST00000563218 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
SPG7-207ENST00000563218 FLAD1Q8NFF5 587 aa18.42■□□□□ 0.54
SPG7-207ENST00000563218 CD2APQ9Y5K6 639 aa18.42■□□□□ 0.54
SPG7-207ENST00000563218 TJP1Q07157 1748 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms