RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 MYT1Q01538 1121 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 USP17L24Q0WX57 530 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 PTK7Q13308 1070 aa10.57□□□□□ -0.72
LINC00557-201ENST00000563184 ELOAQ14241 798 aaKnown RBP10.57□□□□□ -0.72
LINC00557-201ENST00000563184 SNIP1Q8TAD8 396 aaKnown RBP10.57□□□□□ -0.72
LINC00557-201ENST00000563184 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
LINC00557-201ENST00000563184 PPP1R26Q5T8A7 1209 aaPredicted RBP10.56□□□□□ -0.72
LINC00557-201ENST00000563184 CCDC116Q8IYX3 515 aa10.56□□□□□ -0.72
LINC00557-201ENST00000563184 OGFOD1Q8N543 542 aa10.56□□□□□ -0.72
LINC00557-201ENST00000563184 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
LINC00557-201ENST00000563184 PCDHGA11Q9Y5H2 935 aa10.56□□□□□ -0.72
LINC00557-201ENST00000563184 AVPP01185 164 aa10.55□□□□□ -0.72
LINC00557-201ENST00000563184 RASA1P20936 1047 aa10.55□□□□□ -0.72
LINC00557-201ENST00000563184 ERVK-9P63128 1117 aa10.55□□□□□ -0.72
LINC00557-201ENST00000563184 GTF2IP78347 998 aa10.55□□□□□ -0.72
LINC00557-201ENST00000563184 ZNF784Q8NCA9 323 aaPredicted RBP10.55□□□□□ -0.72
LINC00557-201ENST00000563184 TTC24A2A3L6 582 aaPredicted RBP10.54□□□□□ -0.72
LINC00557-201ENST00000563184 J3QL48 77 aa10.54□□□□□ -0.72
LINC00557-201ENST00000563184 LILRA1O75019 489 aa10.54□□□□□ -0.72
LINC00557-201ENST00000563184 DKK1O94907 266 aa10.54□□□□□ -0.72
LINC00557-201ENST00000563184 DHX9Q08211 1270 aaKnown RBP10.54□□□□□ -0.72
LINC00557-201ENST00000563184 USP4Q13107 963 aa10.54□□□□□ -0.72
LINC00557-201ENST00000563184 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
LINC00557-201ENST00000563184 CRIPAKQ8N1N5 446 aa10.54□□□□□ -0.72
LINC00557-201ENST00000563184 STK32AQ8WU08 396 aa10.54□□□□□ -0.72
LINC00557-201ENST00000563184 NOVA2Q9UNW9 492 aaKnown RBP10.54□□□□□ -0.72
LINC00557-201ENST00000563184 CARNS1A5YM72 827 aa10.53□□□□□ -0.72
LINC00557-201ENST00000563184 TMEM88BA6NKF7 163 aa10.53□□□□□ -0.72
LINC00557-201ENST00000563184 NNTQ13423 1086 aa10.53□□□□□ -0.72
LINC00557-201ENST00000563184 CC2D2BQ6DHV5 1058 aa10.53□□□□□ -0.72
LINC00557-201ENST00000563184 LARP1Q6PKG0 1096 aaKnown RBP10.53□□□□□ -0.72
LINC00557-201ENST00000563184 CYLDQ9NQC7 956 aa10.53□□□□□ -0.72
LINC00557-201ENST00000563184 DNAAF2Q9NVR5 837 aaKnown RBP10.53□□□□□ -0.72
LINC00557-201ENST00000563184 CSB-PGBD3P0DP91 1061 aa10.52□□□□□ -0.73
LINC00557-201ENST00000563184 CTC1Q2NKJ3 1217 aa10.52□□□□□ -0.73
LINC00557-201ENST00000563184 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
LINC00557-201ENST00000563184 ZNF594Q96JF6 807 aaPredicted RBP10.52□□□□□ -0.73
LINC00557-201ENST00000563184 TRAIPQ9BWF2 469 aa10.52□□□□□ -0.73
LINC00557-201ENST00000563184 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
LINC00557-201ENST00000563184 USTQ9Y2C2 406 aa10.52□□□□□ -0.73
LINC00557-201ENST00000563184 PDIA4P13667 645 aaKnown RBP10.51□□□□□ -0.73
LINC00557-201ENST00000563184 SMPD1P17405 629 aa10.51□□□□□ -0.73
LINC00557-201ENST00000563184 ATP1A2P50993 1020 aa10.51□□□□□ -0.73
LINC00557-201ENST00000563184 TMEM164Q5U3C3 297 aa10.51□□□□□ -0.73
LINC00557-201ENST00000563184 ANKMY2Q8IV38 441 aa10.51□□□□□ -0.73
LINC00557-201ENST00000563184 SIX5Q8N196 739 aa10.51□□□□□ -0.73
LINC00557-201ENST00000563184 LARGE2Q8N3Y3 721 aa10.51□□□□□ -0.73
LINC00557-201ENST00000563184 WASF2Q9Y6W5 498 aa10.51□□□□□ -0.73
LINC00557-201ENST00000563184 MYCP01106 439 aaPredicted RBP10.5□□□□□ -0.73
LINC00557-201ENST00000563184 ADD1P35611 737 aaKnown RBP10.5□□□□□ -0.73
LINC00557-201ENST00000563184 SMCPP49901 116 aaPredicted RBP10.5□□□□□ -0.73
LINC00557-201ENST00000563184 DPYDQ12882 1025 aa10.5□□□□□ -0.73
LINC00557-201ENST00000563184 KLF16Q9BXK1 252 aaPredicted RBP10.5□□□□□ -0.73
LINC00557-201ENST00000563184 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
LINC00557-201ENST00000563184 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
LINC00557-201ENST00000563184 AAASQ9NRG9 546 aa10.48□□□□□ -0.73
LINC00557-201ENST00000563184 PGPEP1Q9NXJ5 209 aa10.48□□□□□ -0.73
LINC00557-201ENST00000563184 STAU1O95793 577 aaKnown RBP10.47□□□□□ -0.73
LINC00557-201ENST00000563184 CCDC102BQ68D86 513 aa10.47□□□□□ -0.73
LINC00557-201ENST00000563184 TPCN2Q8NHX9 752 aa10.47□□□□□ -0.73
LINC00557-201ENST00000563184 ITPKCQ96DU7 683 aa10.47□□□□□ -0.73
LINC00557-201ENST00000563184 PSME1Q06323 249 aa10.46□□□□□ -0.73
LINC00557-201ENST00000563184 FAM200AQ8TCP9 573 aa10.46□□□□□ -0.73
LINC00557-201ENST00000563184 SLAIN2Q9P270 581 aa10.46□□□□□ -0.73
LINC00557-201ENST00000563184 SFI1A8K8P3 1242 aa10.45□□□□□ -0.74
LINC00557-201ENST00000563184 TMEM229AB2RXF0 380 aa10.45□□□□□ -0.74
LINC00557-201ENST00000563184 TIMP2P16035 220 aa10.45□□□□□ -0.74
LINC00557-201ENST00000563184 CBLBQ13191 982 aa10.45□□□□□ -0.74
LINC00557-201ENST00000563184 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
LINC00557-201ENST00000563184 AXIN1O15169 862 aa10.44□□□□□ -0.74
LINC00557-201ENST00000563184 ZIC2O95409 532 aaPredicted RBP10.44□□□□□ -0.74
LINC00557-201ENST00000563184 SCNN1DP51172 638 aa10.44□□□□□ -0.74
LINC00557-201ENST00000563184 WDR4P57081 412 aaKnown RBP10.44□□□□□ -0.74
LINC00557-201ENST00000563184 ZNF787Q6DD87 383 aa10.44□□□□□ -0.74
LINC00557-201ENST00000563184 KDF1Q8NAX2 398 aaPredicted RBP10.44□□□□□ -0.74
LINC00557-201ENST00000563184 HPS1Q92902 700 aa10.44□□□□□ -0.74
LINC00557-201ENST00000563184 PDE4CQ08493 712 aa10.43□□□□□ -0.74
LINC00557-201ENST00000563184 ST8SIA5O15466 376 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 ADH1AP07327 375 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 SEC13P55735 322 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 Q6ZVU0 165 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 CYP2U1Q7Z449 544 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC00557-201ENST00000563184 TRIM52Q96A61 297 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 ESF1Q9H501 851 aaKnown RBP10.42□□□□□ -0.74
LINC00557-201ENST00000563184 ETNK1Q9HBU6 452 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 ZNF358Q9NW07 568 aa10.42□□□□□ -0.74
LINC00557-201ENST00000563184 GDF10P55107 478 aa10.41□□□□□ -0.74
LINC00557-201ENST00000563184 WASLO00401 505 aaPredicted RBP10.4□□□□□ -0.74
LINC00557-201ENST00000563184 GNRH1P01148 92 aa10.4□□□□□ -0.74
LINC00557-201ENST00000563184 CLP1Q92989 425 aaKnown RBP10.4□□□□□ -0.74
LINC00557-201ENST00000563184 M0R2N6 131 aa10.39□□□□□ -0.75
LINC00557-201ENST00000563184 SWI5Q1ZZU3 235 aa10.39□□□□□ -0.75
LINC00557-201ENST00000563184 RAB6BQ9NRW1 208 aa10.39□□□□□ -0.75
LINC00557-201ENST00000563184 INHAP05111 366 aa10.38□□□□□ -0.75
LINC00557-201ENST00000563184 TSEN2Q8NCE0 465 aaKnown RBP10.38□□□□□ -0.75
LINC00557-201ENST00000563184 AGBL1Q96MI9 1066 aa10.38□□□□□ -0.75
LINC00557-201ENST00000563184 ARHGEF10LQ9HCE6 1279 aa10.38□□□□□ -0.75
LINC00557-201ENST00000563184 RBM19Q9Y4C8 960 aaKnown RBP10.38□□□□□ -0.75
LINC00557-201ENST00000563184 LGR5O75473 907 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms