RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 CHL1O00533 1208 aa12.06□□□□□ -0.48
LINC00838-201ENST00000562956 TWISTNBQ3B726 338 aaPredicted RBP12.06□□□□□ -0.48
LINC00838-201ENST00000562956 ATF7IPQ6VMQ6 1270 aa12.06□□□□□ -0.48
LINC00838-201ENST00000562956 FTSJ3Q8IY81 847 aaKnown RBP12.06□□□□□ -0.48
LINC00838-201ENST00000562956 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
LINC00838-201ENST00000562956 DEKP35659 375 aaKnown RBP12.05□□□□□ -0.48
LINC00838-201ENST00000562956 MVPQ14764 893 aaKnown RBP12.05□□□□□ -0.48
LINC00838-201ENST00000562956 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
LINC00838-201ENST00000562956 KIF16BQ96L93 1317 aa12.05□□□□□ -0.48
LINC00838-201ENST00000562956 IGHDP01880 384 aa12.04□□□□□ -0.48
LINC00838-201ENST00000562956 LRRC59Q96AG4 307 aaKnown RBP12.04□□□□□ -0.48
LINC00838-201ENST00000562956 TCERG1O14776 1098 aaKnown RBP12.04□□□□□ -0.48
LINC00838-201ENST00000562956 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
LINC00838-201ENST00000562956 KRT24Q2M2I5 525 aa12.04□□□□□ -0.48
LINC00838-201ENST00000562956 ANO8Q9HCE9 1232 aaPredicted RBP12.04□□□□□ -0.48
LINC00838-201ENST00000562956 AXIN2Q9Y2T1 843 aa12.04□□□□□ -0.48
LINC00838-201ENST00000562956 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
LINC00838-201ENST00000562956 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
LINC00838-201ENST00000562956 MIS18AQ9NYP9 233 aa12.04□□□□□ -0.48
LINC00838-201ENST00000562956 NPHP3Q7Z494 1330 aa12.03□□□□□ -0.48
LINC00838-201ENST00000562956 MS4A1P11836 297 aa12.03□□□□□ -0.48
LINC00838-201ENST00000562956 NBR1Q14596 966 aa12.03□□□□□ -0.48
LINC00838-201ENST00000562956 ALS2Q96Q42 1657 aa12.03□□□□□ -0.48
LINC00838-201ENST00000562956 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
LINC00838-201ENST00000562956 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
LINC00838-201ENST00000562956 MED1Q15648 1581 aaPredicted RBP12.03□□□□□ -0.48
LINC00838-201ENST00000562956 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.48
LINC00838-201ENST00000562956 GNAT3A8MTJ3 354 aa12.02□□□□□ -0.48
LINC00838-201ENST00000562956 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.48
LINC00838-201ENST00000562956 AAMPQ13685 434 aa12.02□□□□□ -0.48
LINC00838-201ENST00000562956 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
LINC00838-201ENST00000562956 BRINP3Q76B58 766 aa12.02□□□□□ -0.49
LINC00838-201ENST00000562956 TMEM57Q8N5G2 664 aa12.02□□□□□ -0.49
LINC00838-201ENST00000562956 ANKRD24Q8TF21 1146 aa12.02□□□□□ -0.49
LINC00838-201ENST00000562956 ITPRIPQ8IWB1 547 aa12.01□□□□□ -0.49
LINC00838-201ENST00000562956 CABLES1Q8TDN4 633 aa12.01□□□□□ -0.49
LINC00838-201ENST00000562956 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
LINC00838-201ENST00000562956 PXDNQ92626 1479 aa12.01□□□□□ -0.49
LINC00838-201ENST00000562956 IL17REQ8NFR9 667 aa12□□□□□ -0.49
LINC00838-201ENST00000562956 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
LINC00838-201ENST00000562956 TSPYL4Q9UJ04 414 aa12□□□□□ -0.49
LINC00838-201ENST00000562956 KIAA0232Q92628 1395 aa12□□□□□ -0.49
LINC00838-201ENST00000562956 SLAIN2Q9P270 581 aa12□□□□□ -0.49
LINC00838-201ENST00000562956 SPATA31A3Q5VYP0 1347 aa11.99□□□□□ -0.49
LINC00838-201ENST00000562956 ARHGAP45Q92619 1136 aa11.99□□□□□ -0.49
LINC00838-201ENST00000562956 DDX19BQ9UMR2 479 aa11.99□□□□□ -0.49
LINC00838-201ENST00000562956 NCAPD2Q15021 1401 aa11.98□□□□□ -0.49
LINC00838-201ENST00000562956 ERBB3P21860 1342 aa11.98□□□□□ -0.49
LINC00838-201ENST00000562956 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
LINC00838-201ENST00000562956 RGPD2P0DJD1 1756 aa11.97□□□□□ -0.49
LINC00838-201ENST00000562956 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
LINC00838-201ENST00000562956 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.49
LINC00838-201ENST00000562956 ABCC4O15439 1325 aa11.96□□□□□ -0.5
LINC00838-201ENST00000562956 TAF7Q15545 349 aaPredicted RBP11.96□□□□□ -0.5
LINC00838-201ENST00000562956 LGR6Q9HBX8 967 aa11.96□□□□□ -0.5
LINC00838-201ENST00000562956 PDE4AP27815 886 aa11.95□□□□□ -0.5
LINC00838-201ENST00000562956 RGS3P49796 1198 aa11.95□□□□□ -0.5
LINC00838-201ENST00000562956 CHRNA2Q15822 529 aa11.95□□□□□ -0.5
LINC00838-201ENST00000562956 PLEKHO1Q53GL0 409 aaPredicted RBP11.95□□□□□ -0.5
LINC00838-201ENST00000562956 ZNF530Q6P9A1 599 aaPredicted RBP11.95□□□□□ -0.5
LINC00838-201ENST00000562956 CEMIPQ8WUJ3 1361 aa11.95□□□□□ -0.5
LINC00838-201ENST00000562956 RWDD1Q9H446 243 aaPredicted RBP11.95□□□□□ -0.5
LINC00838-201ENST00000562956 AMOTQ4VCS5 1084 aa11.94□□□□□ -0.5
LINC00838-201ENST00000562956 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
LINC00838-201ENST00000562956 API5Q9BZZ5 524 aaKnown RBP11.94□□□□□ -0.5
LINC00838-201ENST00000562956 SOS2Q07890 1332 aaPredicted RBP11.94□□□□□ -0.5
LINC00838-201ENST00000562956 ZBTB7BO15156 539 aaPredicted RBP11.94□□□□□ -0.5
LINC00838-201ENST00000562956 CAMTA1Q9Y6Y1 1673 aa11.94□□□□□ -0.5
LINC00838-201ENST00000562956 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
LINC00838-201ENST00000562956 BACH2Q9BYV9 841 aa11.93□□□□□ -0.5
LINC00838-201ENST00000562956 NLRP2Q9NX02 1062 aa11.93□□□□□ -0.5
LINC00838-201ENST00000562956 MPRIPQ6WCQ1 1025 aa11.93□□□□□ -0.5
LINC00838-201ENST00000562956 BABAM1Q9NWV8 329 aa11.93□□□□□ -0.5
LINC00838-201ENST00000562956 RGS12O14924 1447 aa11.93□□□□□ -0.5
LINC00838-201ENST00000562956 RTN4Q9NQC3 1192 aaKnown RBP11.93□□□□□ -0.5
LINC00838-201ENST00000562956 CPDO75976 1380 aa11.92□□□□□ -0.5
LINC00838-201ENST00000562956 RGPD5Q99666 1765 aa11.92□□□□□ -0.5
LINC00838-201ENST00000562956 HDAC1Q13547 482 aaPredicted RBP11.92□□□□□ -0.5
LINC00838-201ENST00000562956 LMO7Q8WWI1 1683 aa11.92□□□□□ -0.5
LINC00838-201ENST00000562956 CRYBG1Q9Y4K1 1723 aa11.92□□□□□ -0.5
LINC00838-201ENST00000562956 COL18A1P39060 1754 aa11.92□□□□□ -0.5
LINC00838-201ENST00000562956 CSB-PGBD3P0DP91 1061 aa11.91□□□□□ -0.5
LINC00838-201ENST00000562956 C1orf141Q5JVX7 400 aa11.91□□□□□ -0.5
LINC00838-201ENST00000562956 G2E3Q7L622 706 aa11.91□□□□□ -0.5
LINC00838-201ENST00000562956 PTPRCP08575 1304 aa11.91□□□□□ -0.5
LINC00838-201ENST00000562956 RNMTO43148 476 aaKnown RBP11.9□□□□□ -0.5
LINC00838-201ENST00000562956 NECTIN2Q92692 538 aa11.9□□□□□ -0.5
LINC00838-201ENST00000562956 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.5
LINC00838-201ENST00000562956 PDZRN3Q9UPQ7 1066 aa11.9□□□□□ -0.5
LINC00838-201ENST00000562956 RAPGEF4Q8WZA2 1011 aa11.9□□□□□ -0.5
LINC00838-201ENST00000562956 TEFQ10587 303 aa11.9□□□□□ -0.51
LINC00838-201ENST00000562956 INTS3Q68E01 1043 aaKnown RBP11.9□□□□□ -0.51
LINC00838-201ENST00000562956 KCNQ3O43525 872 aa11.89□□□□□ -0.51
LINC00838-201ENST00000562956 ABCC6O95255 1503 aa11.89□□□□□ -0.51
LINC00838-201ENST00000562956 EIF4A1P60842 406 aaKnown RBP11.89□□□□□ -0.51
LINC00838-201ENST00000562956 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
LINC00838-201ENST00000562956 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
LINC00838-201ENST00000562956 CHMP4BQ9H444 224 aaKnown RBP11.89□□□□□ -0.51
LINC00838-201ENST00000562956 MEGF6O75095 1541 aa11.88□□□□□ -0.51
LINC00838-201ENST00000562956 BTBD11A6QL63 1104 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms