RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
CYLD-204ENST00000562884 ZCRB1Q8TBF4 217 aaKnown RBP12.1□□□□□ -0.47
CYLD-204ENST00000562884 CAMKK2Q96RR4 588 aa12.1□□□□□ -0.47
CYLD-204ENST00000562884 NPC1L1Q9UHC9 1359 aa12.09□□□□□ -0.47
CYLD-204ENST00000562884 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
CYLD-204ENST00000562884 PLEKHG2Q9H7P9 1386 aa12.07□□□□□ -0.48
CYLD-204ENST00000562884 NHSQ6T4R5 1651 aa12.07□□□□□ -0.48
CYLD-204ENST00000562884 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
CYLD-204ENST00000562884 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
CYLD-204ENST00000562884 RREB1Q92766 1687 aa12.06□□□□□ -0.48
CYLD-204ENST00000562884 USHBP1Q8N6Y0 703 aa12.06□□□□□ -0.48
CYLD-204ENST00000562884 EYA1Q99502 592 aa12.06□□□□□ -0.48
CYLD-204ENST00000562884 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.06□□□□□ -0.48
CYLD-204ENST00000562884 SPG7Q9UQ90 795 aa12.06□□□□□ -0.48
CYLD-204ENST00000562884 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
CYLD-204ENST00000562884 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
CYLD-204ENST00000562884 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
CYLD-204ENST00000562884 EIF4A2Q14240 407 aaKnown RBP12.05□□□□□ -0.48
CYLD-204ENST00000562884 SHANK3Q9BYB0 1731 aa12.05□□□□□ -0.48
CYLD-204ENST00000562884 MEGF6O75095 1541 aa12.05□□□□□ -0.48
CYLD-204ENST00000562884 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
CYLD-204ENST00000562884 CC2D1BQ5T0F9 858 aaKnown RBP12.04□□□□□ -0.48
CYLD-204ENST00000562884 BTAF1O14981 1849 aa12.04□□□□□ -0.48
CYLD-204ENST00000562884 PKD1L3Q7Z443 1732 aa12.03□□□□□ -0.48
CYLD-204ENST00000562884 ACSBG1Q96GR2 724 aa12.03□□□□□ -0.48
CYLD-204ENST00000562884 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
CYLD-204ENST00000562884 NUP188Q5SRE5 1749 aa12.03□□□□□ -0.48
CYLD-204ENST00000562884 KCNQ2O43526 872 aa12.02□□□□□ -0.49
CYLD-204ENST00000562884 MTHFSP49914 203 aa12.02□□□□□ -0.49
CYLD-204ENST00000562884 DOT1LQ8TEK3 1739 aa12.01□□□□□ -0.49
CYLD-204ENST00000562884 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
CYLD-204ENST00000562884 PRIM1P49642 420 aaKnown RBP12□□□□□ -0.49
CYLD-204ENST00000562884 PLEKHO1Q53GL0 409 aaPredicted RBP12□□□□□ -0.49
CYLD-204ENST00000562884 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
CYLD-204ENST00000562884 IFNL2Q8IZJ0 200 aa12□□□□□ -0.49
CYLD-204ENST00000562884 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
CYLD-204ENST00000562884 ITGB4P16144 1822 aa12□□□□□ -0.49
CYLD-204ENST00000562884 CYP27B1O15528 508 aa11.99□□□□□ -0.49
CYLD-204ENST00000562884 DIAPH1O60610 1272 aaKnown RBP11.99□□□□□ -0.49
CYLD-204ENST00000562884 HSP90AB1P08238 724 aaKnown RBP11.99□□□□□ -0.49
CYLD-204ENST00000562884 IL13P35225 146 aa11.99□□□□□ -0.49
CYLD-204ENST00000562884 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
CYLD-204ENST00000562884 TXNRD1Q16881 649 aa11.99□□□□□ -0.49
CYLD-204ENST00000562884 SLC27A3Q5K4L6 730 aa11.99□□□□□ -0.49
CYLD-204ENST00000562884 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
CYLD-204ENST00000562884 CFAP53Q96M91 514 aa11.98□□□□□ -0.49
CYLD-204ENST00000562884 KDRP35968 1356 aa11.97□□□□□ -0.49
CYLD-204ENST00000562884 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
CYLD-204ENST00000562884 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
CYLD-204ENST00000562884 PROM2Q8N271 834 aa11.97□□□□□ -0.49
CYLD-204ENST00000562884 STK32BQ9NY57 414 aa11.97□□□□□ -0.49
CYLD-204ENST00000562884 PHKG2P15735 406 aa11.96□□□□□ -0.49
CYLD-204ENST00000562884 CNGB1Q14028 1251 aaPredicted RBP11.96□□□□□ -0.49
CYLD-204ENST00000562884 SMARCC1Q92922 1105 aaPredicted RBP11.96□□□□□ -0.49
CYLD-204ENST00000562884 LY75O60449 1722 aa11.96□□□□□ -0.49
CYLD-204ENST00000562884 C1orf141Q5JVX7 400 aa11.95□□□□□ -0.5
CYLD-204ENST00000562884 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
CYLD-204ENST00000562884 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
CYLD-204ENST00000562884 LRP5O75197 1615 aa11.95□□□□□ -0.5
CYLD-204ENST00000562884 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
CYLD-204ENST00000562884 SLC15A2Q16348 729 aa11.94□□□□□ -0.5
CYLD-204ENST00000562884 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
CYLD-204ENST00000562884 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
CYLD-204ENST00000562884 TMOD3Q9NYL9 352 aa11.94□□□□□ -0.5
CYLD-204ENST00000562884 PPP2R1AP30153 589 aa11.93□□□□□ -0.5
CYLD-204ENST00000562884 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
CYLD-204ENST00000562884 TOGARAM1Q9Y4F4 1720 aa11.92□□□□□ -0.5
CYLD-204ENST00000562884 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
CYLD-204ENST00000562884 VIRMAQ69YN4 1812 aaKnown RBP11.92□□□□□ -0.5
CYLD-204ENST00000562884 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
CYLD-204ENST00000562884 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
CYLD-204ENST00000562884 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
CYLD-204ENST00000562884 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
CYLD-204ENST00000562884 HMOX1P09601 288 aa11.91□□□□□ -0.5
CYLD-204ENST00000562884 RALBP1Q15311 655 aa11.91□□□□□ -0.5
CYLD-204ENST00000562884 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
CYLD-204ENST00000562884 PIGBQ92521 554 aa11.91□□□□□ -0.5
CYLD-204ENST00000562884 RNF39Q9H2S5 420 aa11.91□□□□□ -0.5
CYLD-204ENST00000562884 ANO8Q9HCE9 1232 aaPredicted RBP11.91□□□□□ -0.5
CYLD-204ENST00000562884 SCN11AQ9UI33 1791 aa11.91□□□□□ -0.5
CYLD-204ENST00000562884 TAF1LQ8IZX4 1826 aa11.9□□□□□ -0.5
CYLD-204ENST00000562884 PAPPAQ13219 1627 aa11.9□□□□□ -0.5
CYLD-204ENST00000562884 DDX10Q13206 875 aaKnown RBP11.9□□□□□ -0.5
CYLD-204ENST00000562884 SPON1Q9HCB6 807 aa11.9□□□□□ -0.5
CYLD-204ENST00000562884 LRRC4BQ9NT99 713 aa11.9□□□□□ -0.5
CYLD-204ENST00000562884 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
CYLD-204ENST00000562884 CABP4P57796 275 aa11.89□□□□□ -0.51
CYLD-204ENST00000562884 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
CYLD-204ENST00000562884 CASZ1Q86V15 1759 aa11.89□□□□□ -0.51
CYLD-204ENST00000562884 C5P01031 1676 aa11.88□□□□□ -0.51
CYLD-204ENST00000562884 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
CYLD-204ENST00000562884 FCHSD2O94868 740 aa11.88□□□□□ -0.51
CYLD-204ENST00000562884 FLAD1Q8NFF5 587 aa11.88□□□□□ -0.51
CYLD-204ENST00000562884 GAS2L2Q8NHY3 880 aa11.88□□□□□ -0.51
CYLD-204ENST00000562884 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
CYLD-204ENST00000562884 TFCP2L1Q9NZI6 479 aa11.88□□□□□ -0.51
CYLD-204ENST00000562884 NEFMP07197 916 aa11.87□□□□□ -0.51
CYLD-204ENST00000562884 PNNQ9H307 717 aaKnown RBP11.87□□□□□ -0.51
CYLD-204ENST00000562884 ZNF831Q5JPB2 1677 aa11.87□□□□□ -0.51
CYLD-204ENST00000562884 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms