RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 PELP1Q8IZL8 1130 aaKnown RBP12.87□□□□□ -0.35
CHRFAM7A-204ENST00000562729 ANKRD24Q8TF21 1146 aa12.87□□□□□ -0.35
CHRFAM7A-204ENST00000562729 LTV1Q96GA3 475 aaPredicted RBP12.87□□□□□ -0.35
CHRFAM7A-204ENST00000562729 OVOS2A0A0G2JMS6 1433 aa12.87□□□□□ -0.35
CHRFAM7A-204ENST00000562729 OVOS2A0A0J9YW53 1432 aa12.87□□□□□ -0.35
CHRFAM7A-204ENST00000562729 OVOS2Q6IE36 1432 aa12.87□□□□□ -0.35
CHRFAM7A-204ENST00000562729 EXOC5O00471 708 aa12.86□□□□□ -0.35
CHRFAM7A-204ENST00000562729 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
CHRFAM7A-204ENST00000562729 LRRC37A3O60309 1634 aa12.85□□□□□ -0.35
CHRFAM7A-204ENST00000562729 WNK3Q9BYP7 1800 aa12.85□□□□□ -0.35
CHRFAM7A-204ENST00000562729 ERBB3P21860 1342 aa12.85□□□□□ -0.35
CHRFAM7A-204ENST00000562729 KIF20BQ96Q89 1820 aa12.84□□□□□ -0.35
CHRFAM7A-204ENST00000562729 IP6K1Q92551 441 aa12.84□□□□□ -0.35
CHRFAM7A-204ENST00000562729 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
CHRFAM7A-204ENST00000562729 SMG6Q86US8 1419 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-204ENST00000562729 HSPA5P11021 654 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-204ENST00000562729 IL2RBP14784 551 aa12.83□□□□□ -0.36
CHRFAM7A-204ENST00000562729 EZH2Q15910 746 aaKnown RBP12.83□□□□□ -0.36
CHRFAM7A-204ENST00000562729 NSD3Q9BZ95 1437 aa12.82□□□□□ -0.36
CHRFAM7A-204ENST00000562729 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
CHRFAM7A-204ENST00000562729 FYB1O15117 783 aa12.82□□□□□ -0.36
CHRFAM7A-204ENST00000562729 PROM2Q8N271 834 aa12.82□□□□□ -0.36
CHRFAM7A-204ENST00000562729 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
CHRFAM7A-204ENST00000562729 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
CHRFAM7A-204ENST00000562729 PPM1GO15355 546 aaPredicted RBP12.81□□□□□ -0.36
CHRFAM7A-204ENST00000562729 HOXC9P31274 260 aa12.81□□□□□ -0.36
CHRFAM7A-204ENST00000562729 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
CHRFAM7A-204ENST00000562729 NBPF14Q5TI25 921 aa12.81□□□□□ -0.36
CHRFAM7A-204ENST00000562729 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
CHRFAM7A-204ENST00000562729 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
CHRFAM7A-204ENST00000562729 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
CHRFAM7A-204ENST00000562729 MYOM1P52179 1685 aa12.8□□□□□ -0.36
CHRFAM7A-204ENST00000562729 FAM208AQ9UK61 1670 aaKnown RBP12.8□□□□□ -0.36
CHRFAM7A-204ENST00000562729 FBLN1P23142 703 aa12.8□□□□□ -0.36
CHRFAM7A-204ENST00000562729 FKBP8Q14318 412 aa12.8□□□□□ -0.36
CHRFAM7A-204ENST00000562729 MARCH10Q8NA82 808 aaPredicted RBP12.8□□□□□ -0.36
CHRFAM7A-204ENST00000562729 RTL1A6NKG5 1358 aa12.8□□□□□ -0.36
CHRFAM7A-204ENST00000562729 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
CHRFAM7A-204ENST00000562729 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
CHRFAM7A-204ENST00000562729 CAMKK2Q96RR4 588 aa12.79□□□□□ -0.36
CHRFAM7A-204ENST00000562729 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
CHRFAM7A-204ENST00000562729 ASTLQ6HA08 431 aaPredicted RBP12.78□□□□□ -0.36
CHRFAM7A-204ENST00000562729 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-204ENST00000562729 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
CHRFAM7A-204ENST00000562729 PEAK1Q9H792 1746 aa12.76□□□□□ -0.37
CHRFAM7A-204ENST00000562729 TNNT2P45379 298 aaPredicted RBP12.76□□□□□ -0.37
CHRFAM7A-204ENST00000562729 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
CHRFAM7A-204ENST00000562729 ACSBG1Q96GR2 724 aa12.76□□□□□ -0.37
CHRFAM7A-204ENST00000562729 FLT4P35916 1363 aa12.76□□□□□ -0.37
CHRFAM7A-204ENST00000562729 SBF2Q86WG5 1849 aa12.76□□□□□ -0.37
CHRFAM7A-204ENST00000562729 ATMINO43313 823 aaPredicted RBP12.75□□□□□ -0.37
CHRFAM7A-204ENST00000562729 PANK3Q9H999 370 aa12.75□□□□□ -0.37
CHRFAM7A-204ENST00000562729 PLSCR2Q9NRY7 297 aa12.75□□□□□ -0.37
CHRFAM7A-204ENST00000562729 HSP90AB2PQ58FF8 381 aa12.74□□□□□ -0.37
CHRFAM7A-204ENST00000562729 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
CHRFAM7A-204ENST00000562729 RREB1Q92766 1687 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 INSRP06213 1382 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 KIF24Q5T7B8 1368 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 PLSCR1O15162 318 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 USHBP1Q8N6Y0 703 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 ZCRB1Q8TBF4 217 aaKnown RBP12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 KNSTRNQ9Y448 316 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 RGPD2P0DJD1 1756 aa12.73□□□□□ -0.37
CHRFAM7A-204ENST00000562729 BCL9O00512 1426 aa12.72□□□□□ -0.37
CHRFAM7A-204ENST00000562729 NUP188Q5SRE5 1749 aa12.72□□□□□ -0.37
CHRFAM7A-204ENST00000562729 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
CHRFAM7A-204ENST00000562729 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
CHRFAM7A-204ENST00000562729 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.37
CHRFAM7A-204ENST00000562729 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.37
CHRFAM7A-204ENST00000562729 KCNQ2O43526 872 aa12.71□□□□□ -0.37
CHRFAM7A-204ENST00000562729 PTF1AQ7RTS3 328 aa12.71□□□□□ -0.37
CHRFAM7A-204ENST00000562729 NHSQ6T4R5 1651 aa12.7□□□□□ -0.38
CHRFAM7A-204ENST00000562729 SRCAPQ6ZRS2 3230 aa12.7□□□□□ -0.38
CHRFAM7A-204ENST00000562729 MORC1Q86VD1 984 aa12.7□□□□□ -0.38
CHRFAM7A-204ENST00000562729 SLC39A7Q92504 469 aa12.7□□□□□ -0.38
CHRFAM7A-204ENST00000562729 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
CHRFAM7A-204ENST00000562729 ANKRD26Q9UPS8 1709 aa12.7□□□□□ -0.38
CHRFAM7A-204ENST00000562729 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
CHRFAM7A-204ENST00000562729 POTEJP0CG39 1038 aa12.69□□□□□ -0.38
CHRFAM7A-204ENST00000562729 C7P10643 843 aa12.69□□□□□ -0.38
CHRFAM7A-204ENST00000562729 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
CHRFAM7A-204ENST00000562729 NSD2O96028 1365 aa12.69□□□□□ -0.38
CHRFAM7A-204ENST00000562729 MEGF6O75095 1541 aa12.68□□□□□ -0.38
CHRFAM7A-204ENST00000562729 PPP1R1BQ9UD71 204 aaPredicted RBP12.68□□□□□ -0.38
CHRFAM7A-204ENST00000562729 LRP5O75197 1615 aa12.68□□□□□ -0.38
CHRFAM7A-204ENST00000562729 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
CHRFAM7A-204ENST00000562729 WASHC2AQ641Q2 1341 aa12.67□□□□□ -0.38
CHRFAM7A-204ENST00000562729 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
CHRFAM7A-204ENST00000562729 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
CHRFAM7A-204ENST00000562729 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
CHRFAM7A-204ENST00000562729 BTAF1O14981 1849 aa12.67□□□□□ -0.38
CHRFAM7A-204ENST00000562729 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
CHRFAM7A-204ENST00000562729 SPG7Q9UQ90 795 aa12.66□□□□□ -0.38
CHRFAM7A-204ENST00000562729 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
CHRFAM7A-204ENST00000562729 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms