RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 PTF1AQ7RTS3 328 aa20.98■□□□□ 0.95
CCNDBP1-203ENST00000562553 CNGB1Q14028 1251 aaPredicted RBP20.97■□□□□ 0.95
CCNDBP1-203ENST00000562553 NPC1L1Q9UHC9 1359 aa20.97■□□□□ 0.95
CCNDBP1-203ENST00000562553 NHSQ6T4R5 1651 aa20.96■□□□□ 0.95
CCNDBP1-203ENST00000562553 EYA1Q99502 592 aa20.96■□□□□ 0.95
CCNDBP1-203ENST00000562553 NUP188Q5SRE5 1749 aa20.95■□□□□ 0.94
CCNDBP1-203ENST00000562553 R3HDM1Q15032 1099 aaKnown RBP20.95■□□□□ 0.94
CCNDBP1-203ENST00000562553 ZCRB1Q8TBF4 217 aaKnown RBP20.94■□□□□ 0.94
CCNDBP1-203ENST00000562553 DDX54Q8TDD1 881 aaKnown RBP20.94■□□□□ 0.94
CCNDBP1-203ENST00000562553 RAPGEF4Q8WZA2 1011 aa20.94■□□□□ 0.94
CCNDBP1-203ENST00000562553 PKD1L3Q7Z443 1732 aa20.94■□□□□ 0.94
CCNDBP1-203ENST00000562553 RGPD3A6NKT7 1758 aaPredicted RBP20.93■□□□□ 0.94
CCNDBP1-203ENST00000562553 RGPD4Q7Z3J3 1758 aa20.93■□□□□ 0.94
CCNDBP1-203ENST00000562553 TATP17735 454 aaPredicted RBP20.93■□□□□ 0.94
CCNDBP1-203ENST00000562553 ACSBG1Q96GR2 724 aa20.93■□□□□ 0.94
CCNDBP1-203ENST00000562553 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
CCNDBP1-203ENST00000562553 KCNQ2O43526 872 aa20.92■□□□□ 0.94
CCNDBP1-203ENST00000562553 BCL11BQ9C0K0 894 aaPredicted RBP20.92■□□□□ 0.94
CCNDBP1-203ENST00000562553 BTAF1O14981 1849 aa20.91■□□□□ 0.94
CCNDBP1-203ENST00000562553 IGSF1Q8N6C5 1336 aa20.9■□□□□ 0.94
CCNDBP1-203ENST00000562553 MTHFSP49914 203 aa20.9■□□□□ 0.94
CCNDBP1-203ENST00000562553 PLSCR1O15162 318 aa20.89■□□□□ 0.93
CCNDBP1-203ENST00000562553 NBPF14Q5TI25 921 aa20.88■□□□□ 0.93
CCNDBP1-203ENST00000562553 IL13P35225 146 aa20.86■□□□□ 0.93
CCNDBP1-203ENST00000562553 ZEB1P37275 1124 aaPredicted RBP20.86■□□□□ 0.93
CCNDBP1-203ENST00000562553 PCDH11XQ9BZA7 1347 aa20.85■□□□□ 0.93
CCNDBP1-203ENST00000562553 PCDH11YQ9BZA8 1340 aa20.85■□□□□ 0.93
CCNDBP1-203ENST00000562553 TOGARAM1Q9Y4F4 1720 aa20.85■□□□□ 0.93
CCNDBP1-203ENST00000562553 COL3A1P02461 1466 aaPredicted RBP20.84■□□□□ 0.93
CCNDBP1-203ENST00000562553 CYP27B1O15528 508 aa20.84■□□□□ 0.93
CCNDBP1-203ENST00000562553 AEBP1Q8IUX7 1158 aa20.84■□□□□ 0.93
CCNDBP1-203ENST00000562553 ITGB4P16144 1822 aa20.81■□□□□ 0.92
CCNDBP1-203ENST00000562553 PRIM1P49642 420 aaKnown RBP20.81■□□□□ 0.92
CCNDBP1-203ENST00000562553 PROM2Q8N271 834 aa20.81■□□□□ 0.92
CCNDBP1-203ENST00000562553 SULT6B1Q6IMI4 303 aa20.8■□□□□ 0.92
CCNDBP1-203ENST00000562553 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
CCNDBP1-203ENST00000562553 SPG7Q9UQ90 795 aa20.8■□□□□ 0.92
CCNDBP1-203ENST00000562553 KDRP35968 1356 aa20.8■□□□□ 0.92
CCNDBP1-203ENST00000562553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.79■□□□□ 0.92
CCNDBP1-203ENST00000562553 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
CCNDBP1-203ENST00000562553 DIAPH1O60610 1272 aaKnown RBP20.78■□□□□ 0.92
CCNDBP1-203ENST00000562553 DDX10Q13206 875 aaKnown RBP20.78■□□□□ 0.92
CCNDBP1-203ENST00000562553 PPP2R1AP30153 589 aa20.77■□□□□ 0.92
CCNDBP1-203ENST00000562553 TXNRD1Q16881 649 aa20.77■□□□□ 0.92
CCNDBP1-203ENST00000562553 LY75O60449 1722 aa20.76■□□□□ 0.91
CCNDBP1-203ENST00000562553 PHKG2P15735 406 aa20.76■□□□□ 0.91
CCNDBP1-203ENST00000562553 HMOX1P09601 288 aa20.75■□□□□ 0.91
CCNDBP1-203ENST00000562553 NKX1-1Q15270 411 aaPredicted RBP20.75■□□□□ 0.91
CCNDBP1-203ENST00000562553 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
CCNDBP1-203ENST00000562553 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
CCNDBP1-203ENST00000562553 PAPPAQ13219 1627 aa20.74■□□□□ 0.91
CCNDBP1-203ENST00000562553 CASZ1Q86V15 1759 aa20.73■□□□□ 0.91
CCNDBP1-203ENST00000562553 PLEKHO1Q53GL0 409 aaPredicted RBP20.73■□□□□ 0.91
CCNDBP1-203ENST00000562553 SPON1Q9HCB6 807 aa20.73■□□□□ 0.91
CCNDBP1-203ENST00000562553 ZNF530Q6P9A1 599 aaPredicted RBP20.72■□□□□ 0.91
CCNDBP1-203ENST00000562553 AMOTQ4VCS5 1084 aa20.71■□□□□ 0.91
CCNDBP1-203ENST00000562553 MPRIPQ6WCQ1 1025 aa20.71■□□□□ 0.91
CCNDBP1-203ENST00000562553 LRRC4BQ9NT99 713 aa20.71■□□□□ 0.91
CCNDBP1-203ENST00000562553 U2SURPO15042 1029 aaKnown RBP20.7■□□□□ 0.9
CCNDBP1-203ENST00000562553 CFAP53Q96M91 514 aa20.7■□□□□ 0.9
CCNDBP1-203ENST00000562553 KDM6AO15550 1401 aaPredicted RBP20.7■□□□□ 0.9
CCNDBP1-203ENST00000562553 VIRMAQ69YN4 1812 aaKnown RBP20.69■□□□□ 0.9
CCNDBP1-203ENST00000562553 KCNQ4P56696 695 aa20.68■□□□□ 0.9
CCNDBP1-203ENST00000562553 PIGBQ92521 554 aa20.68■□□□□ 0.9
CCNDBP1-203ENST00000562553 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
CCNDBP1-203ENST00000562553 PALLDQ8WX93 1383 aa20.66■□□□□ 0.9
CCNDBP1-203ENST00000562553 TUBGCP6Q96RT7 1819 aa20.65■□□□□ 0.9
CCNDBP1-203ENST00000562553 HSP90AB1P08238 724 aaKnown RBP20.65■□□□□ 0.9
CCNDBP1-203ENST00000562553 SLC15A2Q16348 729 aa20.65■□□□□ 0.9
CCNDBP1-203ENST00000562553 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
CCNDBP1-203ENST00000562553 SLC27A3Q5K4L6 730 aa20.65■□□□□ 0.9
CCNDBP1-203ENST00000562553 STK32BQ9NY57 414 aa20.65■□□□□ 0.9
CCNDBP1-203ENST00000562553 TMOD3Q9NYL9 352 aa20.65■□□□□ 0.9
CCNDBP1-203ENST00000562553 TAF1LQ8IZX4 1826 aa20.64■□□□□ 0.9
CCNDBP1-203ENST00000562553 DCAF5Q96JK2 942 aa20.64■□□□□ 0.89
CCNDBP1-203ENST00000562553 C5P01031 1676 aa20.64■□□□□ 0.89
CCNDBP1-203ENST00000562553 ZNF827Q17R98 1081 aa20.63■□□□□ 0.89
CCNDBP1-203ENST00000562553 MTHFSDQ2M296 383 aaKnown RBP20.63■□□□□ 0.89
CCNDBP1-203ENST00000562553 PPP1R1BQ9UD71 204 aaPredicted RBP20.63■□□□□ 0.89
CCNDBP1-203ENST00000562553 CCNL1Q9UK58 526 aaPredicted RBP20.63■□□□□ 0.89
CCNDBP1-203ENST00000562553 RALBP1Q15311 655 aa20.62■□□□□ 0.89
CCNDBP1-203ENST00000562553 PDGFDQ9GZP0 370 aaPredicted RBP20.62■□□□□ 0.89
CCNDBP1-203ENST00000562553 RSPH6AQ9H0K4 717 aa20.62■□□□□ 0.89
CCNDBP1-203ENST00000562553 NUDCQ9Y266 331 aa20.62■□□□□ 0.89
CCNDBP1-203ENST00000562553 ADAMTS7Q9UKP4 1686 aa20.61■□□□□ 0.89
CCNDBP1-203ENST00000562553 ERVV-2B6SEH9 535 aa20.61■□□□□ 0.89
CCNDBP1-203ENST00000562553 AKAP4Q5JQC9 854 aa20.61■□□□□ 0.89
CCNDBP1-203ENST00000562553 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
CCNDBP1-203ENST00000562553 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
CCNDBP1-203ENST00000562553 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
CCNDBP1-203ENST00000562553 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCNDBP1-203ENST00000562553 SMARCC1Q92922 1105 aaPredicted RBP20.6■□□□□ 0.89
CCNDBP1-203ENST00000562553 AKT1S1Q96B36 256 aa20.6■□□□□ 0.89
CCNDBP1-203ENST00000562553 QSER1Q2KHR3 1735 aa20.6■□□□□ 0.89
CCNDBP1-203ENST00000562553 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
CCNDBP1-203ENST00000562553 PTGER2P43116 358 aa20.58■□□□□ 0.89
CCNDBP1-203ENST00000562553 CABP4P57796 275 aa20.58■□□□□ 0.89
CCNDBP1-203ENST00000562553 PHACTR3Q96KR7 559 aa20.58■□□□□ 0.89
CCNDBP1-203ENST00000562553 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
CCNDBP1-203ENST00000562553 ATG3Q9NT62 314 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms