RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 PARD3Q8TEW0 1356 aa28.84■■■□□ 2.21
NR4A1-219ENST00000562373 PER1O15534 1290 aaPredicted RBP28.83■■■□□ 2.21
NR4A1-219ENST00000562373 TATP17735 454 aaPredicted RBP28.83■■■□□ 2.21
NR4A1-219ENST00000562373 PROM2Q8N271 834 aa28.83■■■□□ 2.21
NR4A1-219ENST00000562373 EYA1Q99502 592 aa28.83■■■□□ 2.21
NR4A1-219ENST00000562373 NSD2O96028 1365 aa28.83■■■□□ 2.21
NR4A1-219ENST00000562373 EIF4A2Q14240 407 aaKnown RBP28.82■■■□□ 2.2
NR4A1-219ENST00000562373 RREB1Q92766 1687 aa28.81■■■□□ 2.2
NR4A1-219ENST00000562373 CC2D1BQ5T0F9 858 aaKnown RBP28.8■■■□□ 2.2
NR4A1-219ENST00000562373 NUP188Q5SRE5 1749 aa28.79■■■□□ 2.2
NR4A1-219ENST00000562373 SHANK3Q9BYB0 1731 aa28.78■■■□□ 2.2
NR4A1-219ENST00000562373 PRIM1P49642 420 aaKnown RBP28.77■■■□□ 2.2
NR4A1-219ENST00000562373 NBPF14Q5TI25 921 aa28.77■■■□□ 2.2
NR4A1-219ENST00000562373 SYTL4Q96C24 671 aaPredicted RBP28.77■■■□□ 2.2
NR4A1-219ENST00000562373 NHSQ6T4R5 1651 aa28.77■■■□□ 2.2
NR4A1-219ENST00000562373 TXNRD1Q16881 649 aa28.76■■■□□ 2.19
NR4A1-219ENST00000562373 ANO8Q9HCE9 1232 aaPredicted RBP28.73■■■□□ 2.19
NR4A1-219ENST00000562373 CYP27B1O15528 508 aa28.71■■■□□ 2.19
NR4A1-219ENST00000562373 BTAF1O14981 1849 aa28.71■■■□□ 2.19
NR4A1-219ENST00000562373 NCAPD2Q15021 1401 aa28.7■■■□□ 2.19
NR4A1-219ENST00000562373 RGPD3A6NKT7 1758 aaPredicted RBP28.69■■■□□ 2.18
NR4A1-219ENST00000562373 RGPD4Q7Z3J3 1758 aa28.69■■■□□ 2.18
NR4A1-219ENST00000562373 PCDH11XQ9BZA7 1347 aa28.69■■■□□ 2.18
NR4A1-219ENST00000562373 PCDH11YQ9BZA8 1340 aa28.69■■■□□ 2.18
NR4A1-219ENST00000562373 DOT1LQ8TEK3 1739 aa28.68■■■□□ 2.18
NR4A1-219ENST00000562373 MTHFSP49914 203 aa28.67■■■□□ 2.18
NR4A1-219ENST00000562373 IGSF1Q8N6C5 1336 aa28.66■■■□□ 2.18
NR4A1-219ENST00000562373 KCNQ4P56696 695 aa28.65■■■□□ 2.18
NR4A1-219ENST00000562373 SPG7Q9UQ90 795 aa28.65■■■□□ 2.18
NR4A1-219ENST00000562373 AEBP1Q8IUX7 1158 aa28.64■■■□□ 2.18
NR4A1-219ENST00000562373 LRRC4BQ9NT99 713 aa28.64■■■□□ 2.18
NR4A1-219ENST00000562373 SRCAPQ6ZRS2 3230 aa28.64■■■□□ 2.17
NR4A1-219ENST00000562373 PDGFDQ9GZP0 370 aaPredicted RBP28.63■■■□□ 2.17
NR4A1-219ENST00000562373 IL13P35225 146 aa28.62■■■□□ 2.17
NR4A1-219ENST00000562373 PKD1L3Q7Z443 1732 aa28.6■■■□□ 2.17
NR4A1-219ENST00000562373 MPRIPQ6WCQ1 1025 aa28.6■■■□□ 2.17
NR4A1-219ENST00000562373 STK32BQ9NY57 414 aa28.6■■■□□ 2.17
NR4A1-219ENST00000562373 SULT6B1Q6IMI4 303 aa28.59■■■□□ 2.17
NR4A1-219ENST00000562373 SLC15A2Q16348 729 aa28.58■■■□□ 2.17
NR4A1-219ENST00000562373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.58■■■□□ 2.17
NR4A1-219ENST00000562373 PHKG2P15735 406 aa28.57■■■□□ 2.16
NR4A1-219ENST00000562373 NPC1L1Q9UHC9 1359 aa28.57■■■□□ 2.16
NR4A1-219ENST00000562373 NKX1-1Q15270 411 aaPredicted RBP28.56■■■□□ 2.16
NR4A1-219ENST00000562373 IFNL2Q8IZJ0 200 aa28.56■■■□□ 2.16
NR4A1-219ENST00000562373 ZNF827Q17R98 1081 aa28.54■■■□□ 2.16
NR4A1-219ENST00000562373 TOGARAM1Q9Y4F4 1720 aa28.54■■■□□ 2.16
NR4A1-219ENST00000562373 PLEKHO1Q53GL0 409 aaPredicted RBP28.53■■■□□ 2.16
NR4A1-219ENST00000562373 LRP5O75197 1615 aa28.53■■■□□ 2.16
NR4A1-219ENST00000562373 HMOX1P09601 288 aa28.52■■■□□ 2.16
NR4A1-219ENST00000562373 PIGBQ92521 554 aa28.52■■■□□ 2.16
NR4A1-219ENST00000562373 DIAPH1O60610 1272 aaKnown RBP28.51■■■□□ 2.15
NR4A1-219ENST00000562373 SLC27A3Q5K4L6 730 aa28.51■■■□□ 2.15
NR4A1-219ENST00000562373 CCNL1Q9UK58 526 aaPredicted RBP28.51■■■□□ 2.15
NR4A1-219ENST00000562373 ITGB4P16144 1822 aa28.5■■■□□ 2.15
NR4A1-219ENST00000562373 ZBTB7AO95365 584 aa28.5■■■□□ 2.15
NR4A1-219ENST00000562373 ZNF530Q6P9A1 599 aaPredicted RBP28.5■■■□□ 2.15
NR4A1-219ENST00000562373 PAPPAQ13219 1627 aa28.48■■■□□ 2.15
NR4A1-219ENST00000562373 AKT1S1Q96B36 256 aa28.48■■■□□ 2.15
NR4A1-219ENST00000562373 LY75O60449 1722 aa28.47■■■□□ 2.15
NR4A1-219ENST00000562373 SPON1Q9HCB6 807 aa28.47■■■□□ 2.15
NR4A1-219ENST00000562373 ATF5Q9Y2D1 282 aaPredicted RBP28.47■■■□□ 2.15
NR4A1-219ENST00000562373 AMOTQ4VCS5 1084 aa28.46■■■□□ 2.15
NR4A1-219ENST00000562373 CASZ1Q86V15 1759 aa28.45■■■□□ 2.15
NR4A1-219ENST00000562373 TMOD3Q9NYL9 352 aa28.45■■■□□ 2.14
NR4A1-219ENST00000562373 KDRP35968 1356 aa28.45■■■□□ 2.14
NR4A1-219ENST00000562373 PALLDQ8WX93 1383 aa28.45■■■□□ 2.14
NR4A1-219ENST00000562373 U2SURPO15042 1029 aaKnown RBP28.44■■■□□ 2.14
NR4A1-219ENST00000562373 ASAP1Q9ULH1 1129 aa28.44■■■□□ 2.14
NR4A1-219ENST00000562373 PPP2R1AP30153 589 aa28.43■■■□□ 2.14
NR4A1-219ENST00000562373 COL3A1P02461 1466 aaPredicted RBP28.41■■■□□ 2.14
NR4A1-219ENST00000562373 C1orf141Q5JVX7 400 aa28.41■■■□□ 2.14
NR4A1-219ENST00000562373 SMARCC1Q92922 1105 aaPredicted RBP28.41■■■□□ 2.14
NR4A1-219ENST00000562373 TFCP2L1Q9NZI6 479 aa28.41■■■□□ 2.14
NR4A1-219ENST00000562373 DCAF5Q96JK2 942 aa28.4■■■□□ 2.14
NR4A1-219ENST00000562373 PLEKHG2Q9H7P9 1386 aa28.39■■■□□ 2.14
NR4A1-219ENST00000562373 KDM6AO15550 1401 aaPredicted RBP28.39■■■□□ 2.14
NR4A1-219ENST00000562373 HSP90AB1P08238 724 aaKnown RBP28.39■■■□□ 2.14
NR4A1-219ENST00000562373 ATG3Q9NT62 314 aa28.39■■■□□ 2.14
NR4A1-219ENST00000562373 ERVV-2B6SEH9 535 aa28.38■■■□□ 2.13
NR4A1-219ENST00000562373 PPP1R1BQ9UD71 204 aaPredicted RBP28.38■■■□□ 2.13
NR4A1-219ENST00000562373 PNPLA7Q6ZV29 1317 aa28.38■■■□□ 2.13
NR4A1-219ENST00000562373 CABP4P57796 275 aa28.37■■■□□ 2.13
NR4A1-219ENST00000562373 DDX10Q13206 875 aaKnown RBP28.37■■■□□ 2.13
NR4A1-219ENST00000562373 MTHFSDQ2M296 383 aaKnown RBP28.36■■■□□ 2.13
NR4A1-219ENST00000562373 PTGER2P43116 358 aa28.35■■■□□ 2.13
NR4A1-219ENST00000562373 CFAP53Q96M91 514 aa28.35■■■□□ 2.13
NR4A1-219ENST00000562373 LGR6Q9HBX8 967 aa28.35■■■□□ 2.13
NR4A1-219ENST00000562373 LOC102724428A0A0B4J2F2 783 aa28.34■■■□□ 2.13
NR4A1-219ENST00000562373 SIK1P57059 783 aa28.34■■■□□ 2.13
NR4A1-219ENST00000562373 SMIM5Q71RC9 77 aa28.34■■■□□ 2.13
NR4A1-219ENST00000562373 MTFR1LQ9H019 292 aa28.34■■■□□ 2.13
NR4A1-219ENST00000562373 AKAP4Q5JQC9 854 aa28.33■■■□□ 2.13
NR4A1-219ENST00000562373 NFATC2IPQ8NCF5 419 aa28.33■■■□□ 2.13
NR4A1-219ENST00000562373 TUBGCP6Q96RT7 1819 aa28.33■■■□□ 2.13
NR4A1-219ENST00000562373 MSH5O43196 834 aa28.32■■■□□ 2.12
NR4A1-219ENST00000562373 ITPK1Q13572 414 aa28.31■■■□□ 2.12
NR4A1-219ENST00000562373 COL23A1Q86Y22 540 aaPredicted RBP28.31■■■□□ 2.12
NR4A1-219ENST00000562373 RBM42Q9BTD8 480 aaKnown RBP28.31■■■□□ 2.12
NR4A1-219ENST00000562373 C5P01031 1676 aa28.3■■■□□ 2.12
NR4A1-219ENST00000562373 ATP6V1AP38606 617 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms