RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
PKD1-225ENST00000562297 COL18A1P39060 1754 aa21.29■■□□□ 1
PKD1-225ENST00000562297 BRPF1P55201 1214 aaPredicted RBP21.29■■□□□ 1
PKD1-225ENST00000562297 ZBTB7CA1YPR0 619 aa21.28■■□□□ 1
PKD1-225ENST00000562297 PLEKHG5O94827 1062 aa21.28■■□□□ 1
PKD1-225ENST00000562297 SPATA31A3Q5VYP0 1347 aa21.28■■□□□ 1
PKD1-225ENST00000562297 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
PKD1-225ENST00000562297 AXIN2Q9Y2T1 843 aa21.28■■□□□ 1
PKD1-225ENST00000562297 HTATSF1O43719 755 aaKnown RBP21.27■■□□□ 1
PKD1-225ENST00000562297 LMO7Q8WWI1 1683 aa21.27■□□□□ 0.99
PKD1-225ENST00000562297 TRIM27P14373 513 aa21.26■□□□□ 0.99
PKD1-225ENST00000562297 SLAIN2Q9P270 581 aa21.26■□□□□ 0.99
PKD1-225ENST00000562297 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
PKD1-225ENST00000562297 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
PKD1-225ENST00000562297 TWISTNBQ3B726 338 aaPredicted RBP21.25■□□□□ 0.99
PKD1-225ENST00000562297 CLUAP1Q96AJ1 413 aa21.25■□□□□ 0.99
PKD1-225ENST00000562297 NOB1Q9ULX3 412 aaKnown RBP21.25■□□□□ 0.99
PKD1-225ENST00000562297 ATF7IPQ6VMQ6 1270 aa21.24■□□□□ 0.99
PKD1-225ENST00000562297 RTF1Q92541 710 aaKnown RBP21.24■□□□□ 0.99
PKD1-225ENST00000562297 MAP3K5Q99683 1374 aa21.24■□□□□ 0.99
PKD1-225ENST00000562297 GNAT3A8MTJ3 354 aa21.24■□□□□ 0.99
PKD1-225ENST00000562297 DZIP1LQ8IYY4 767 aaKnown RBP21.24■□□□□ 0.99
PKD1-225ENST00000562297 ANKRD24Q8TF21 1146 aa21.24■□□□□ 0.99
PKD1-225ENST00000562297 KIAA0232Q92628 1395 aa21.23■□□□□ 0.99
PKD1-225ENST00000562297 ZC3H6P61129 1189 aaKnown RBP21.23■□□□□ 0.99
PKD1-225ENST00000562297 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
PKD1-225ENST00000562297 ABCC6O95255 1503 aa21.22■□□□□ 0.99
PKD1-225ENST00000562297 ELL2O00472 640 aaPredicted RBP21.22■□□□□ 0.99
PKD1-225ENST00000562297 AAMPQ13685 434 aa21.22■□□□□ 0.99
PKD1-225ENST00000562297 SOS2Q07890 1332 aaPredicted RBP21.22■□□□□ 0.99
PKD1-225ENST00000562297 MS4A1P11836 297 aa21.22■□□□□ 0.99
PKD1-225ENST00000562297 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
PKD1-225ENST00000562297 CENPQQ7L2Z9 268 aaPredicted RBP21.22■□□□□ 0.99
PKD1-225ENST00000562297 MRPL50Q8N5N7 158 aaKnown RBP21.22■□□□□ 0.99
PKD1-225ENST00000562297 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
PKD1-225ENST00000562297 CABLES1Q8TDN4 633 aa21.21■□□□□ 0.99
PKD1-225ENST00000562297 ERBB3P21860 1342 aa21.21■□□□□ 0.99
PKD1-225ENST00000562297 NHSL1Q5SYE7 1610 aa21.21■□□□□ 0.99
PKD1-225ENST00000562297 KRT24Q2M2I5 525 aa21.2■□□□□ 0.98
PKD1-225ENST00000562297 FTSJ3Q8IY81 847 aaKnown RBP21.2■□□□□ 0.98
PKD1-225ENST00000562297 IL17REQ8NFR9 667 aa21.2■□□□□ 0.98
PKD1-225ENST00000562297 IPO8O15397 1037 aaKnown RBP21.19■□□□□ 0.98
PKD1-225ENST00000562297 FAM208AQ9UK61 1670 aaKnown RBP21.19■□□□□ 0.98
PKD1-225ENST00000562297 CPDO75976 1380 aa21.18■□□□□ 0.98
PKD1-225ENST00000562297 MIS18AQ9NYP9 233 aa21.18■□□□□ 0.98
PKD1-225ENST00000562297 ABCA3Q99758 1704 aa21.18■□□□□ 0.98
PKD1-225ENST00000562297 CEMIPQ8WUJ3 1361 aa21.18■□□□□ 0.98
PKD1-225ENST00000562297 ARHGAP45Q92619 1136 aa21.17■□□□□ 0.98
PKD1-225ENST00000562297 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
PKD1-225ENST00000562297 IGHDP01880 384 aa21.15■□□□□ 0.98
PKD1-225ENST00000562297 TMEM57Q8N5G2 664 aa21.15■□□□□ 0.98
PKD1-225ENST00000562297 PCDHB15Q9Y5E8 787 aa21.15■□□□□ 0.98
PKD1-225ENST00000562297 TCERG1O14776 1098 aaKnown RBP21.14■□□□□ 0.98
PKD1-225ENST00000562297 DDX19BQ9UMR2 479 aa21.14■□□□□ 0.97
PKD1-225ENST00000562297 HAP1P54257 671 aaPredicted RBP21.13■□□□□ 0.97
PKD1-225ENST00000562297 SKAP1Q86WV1 359 aa21.13■□□□□ 0.97
PKD1-225ENST00000562297 BABAM1Q9NWV8 329 aa21.13■□□□□ 0.97
PKD1-225ENST00000562297 KDM3BQ7LBC6 1761 aa21.13■□□□□ 0.97
PKD1-225ENST00000562297 AMOTQ4VCS5 1084 aa21.12■□□□□ 0.97
PKD1-225ENST00000562297 PLEKHO1Q53GL0 409 aaPredicted RBP21.12■□□□□ 0.97
PKD1-225ENST00000562297 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
PKD1-225ENST00000562297 ITPRIPQ8IWB1 547 aa21.12■□□□□ 0.97
PKD1-225ENST00000562297 TAF7Q15545 349 aaPredicted RBP21.11■□□□□ 0.97
PKD1-225ENST00000562297 CHRNA2Q15822 529 aa21.11■□□□□ 0.97
PKD1-225ENST00000562297 AKAP4Q5JQC9 854 aa21.11■□□□□ 0.97
PKD1-225ENST00000562297 ABCC4O15439 1325 aa21.11■□□□□ 0.97
PKD1-225ENST00000562297 CACNA1FO60840 1977 aa21.11■□□□□ 0.97
PKD1-225ENST00000562297 ZNF530Q6P9A1 599 aaPredicted RBP21.11■□□□□ 0.97
PKD1-225ENST00000562297 LTBP4Q8N2S1 1624 aa21.1■□□□□ 0.97
PKD1-225ENST00000562297 LGR6Q9HBX8 967 aa21.1■□□□□ 0.97
PKD1-225ENST00000562297 SIPA1L3O60292 1781 aaPredicted RBP21.09■□□□□ 0.97
PKD1-225ENST00000562297 RGS12O14924 1447 aa21.09■□□□□ 0.97
PKD1-225ENST00000562297 OVOS2A0A0G2JMS6 1433 aa21.09■□□□□ 0.97
PKD1-225ENST00000562297 ZBTB40Q9NUA8 1239 aa21.09■□□□□ 0.97
PKD1-225ENST00000562297 MEGF6O75095 1541 aa21.07■□□□□ 0.96
PKD1-225ENST00000562297 NLRP2Q9NX02 1062 aa21.07■□□□□ 0.96
PKD1-225ENST00000562297 API5Q9BZZ5 524 aaKnown RBP21.06■□□□□ 0.96
PKD1-225ENST00000562297 PLEKHG2Q9H7P9 1386 aa21.06■□□□□ 0.96
PKD1-225ENST00000562297 PKD1L3Q7Z443 1732 aa21.06■□□□□ 0.96
PKD1-225ENST00000562297 ROBO1Q9Y6N7 1651 aa21.05■□□□□ 0.96
PKD1-225ENST00000562297 SCN11AQ9UI33 1791 aa21.05■□□□□ 0.96
PKD1-225ENST00000562297 MPRIPQ6WCQ1 1025 aa21.05■□□□□ 0.96
PKD1-225ENST00000562297 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
PKD1-225ENST00000562297 ZBTB7BO15156 539 aaPredicted RBP21.04■□□□□ 0.96
PKD1-225ENST00000562297 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
PKD1-225ENST00000562297 C1orf141Q5JVX7 400 aa21.04■□□□□ 0.96
PKD1-225ENST00000562297 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
PKD1-225ENST00000562297 PTPRCP08575 1304 aa21.02■□□□□ 0.96
PKD1-225ENST00000562297 PRDM11Q9NQV5 511 aa21.02■□□□□ 0.96
PKD1-225ENST00000562297 COL5A2P05997 1499 aaPredicted RBP21.02■□□□□ 0.96
PKD1-225ENST00000562297 SLC4A2P04920 1241 aa21.02■□□□□ 0.96
PKD1-225ENST00000562297 CSB-PGBD3P0DP91 1061 aa21.02■□□□□ 0.96
PKD1-225ENST00000562297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.02■□□□□ 0.96
PKD1-225ENST00000562297 HDAC1Q13547 482 aaPredicted RBP21.01■□□□□ 0.95
PKD1-225ENST00000562297 RWDD1Q9H446 243 aaPredicted RBP21.01■□□□□ 0.95
PKD1-225ENST00000562297 AHDC1Q5TGY3 1603 aaPredicted RBP21.01■□□□□ 0.95
PKD1-225ENST00000562297 TEFQ10587 303 aa21■□□□□ 0.95
PKD1-225ENST00000562297 INTS3Q68E01 1043 aaKnown RBP21■□□□□ 0.95
PKD1-225ENST00000562297 WDR17Q8IZU2 1322 aa20.99■□□□□ 0.95
PKD1-225ENST00000562297 TATP17735 454 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms