RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 RAPGEF4Q8WZA2 1011 aa13.01□□□□□ -0.33
NSMCE1-203ENST00000562039 PARD3Q8TEW0 1356 aa13□□□□□ -0.33
NSMCE1-203ENST00000562039 KCNQ4P56696 695 aa13□□□□□ -0.33
NSMCE1-203ENST00000562039 MORC1Q86VD1 984 aa13□□□□□ -0.33
NSMCE1-203ENST00000562039 PLSCR1O15162 318 aa12.99□□□□□ -0.33
NSMCE1-203ENST00000562039 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
NSMCE1-203ENST00000562039 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
NSMCE1-203ENST00000562039 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
NSMCE1-203ENST00000562039 CC2D1BQ5T0F9 858 aaKnown RBP12.98□□□□□ -0.33
NSMCE1-203ENST00000562039 EYA1Q99502 592 aa12.98□□□□□ -0.33
NSMCE1-203ENST00000562039 NHSQ6T4R5 1651 aa12.98□□□□□ -0.33
NSMCE1-203ENST00000562039 BCL9O00512 1426 aa12.97□□□□□ -0.33
NSMCE1-203ENST00000562039 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
NSMCE1-203ENST00000562039 WASHC2AQ641Q2 1341 aa12.97□□□□□ -0.33
NSMCE1-203ENST00000562039 EIF4A2Q14240 407 aaKnown RBP12.97□□□□□ -0.33
NSMCE1-203ENST00000562039 BTAF1O14981 1849 aa12.97□□□□□ -0.33
NSMCE1-203ENST00000562039 ANKRD26Q9UPS8 1709 aa12.96□□□□□ -0.33
NSMCE1-203ENST00000562039 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
NSMCE1-203ENST00000562039 STK32BQ9NY57 414 aa12.95□□□□□ -0.34
NSMCE1-203ENST00000562039 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
NSMCE1-203ENST00000562039 CYP27B1O15528 508 aa12.94□□□□□ -0.34
NSMCE1-203ENST00000562039 ZBTB7AO95365 584 aa12.94□□□□□ -0.34
NSMCE1-203ENST00000562039 LRRC4BQ9NT99 713 aa12.94□□□□□ -0.34
NSMCE1-203ENST00000562039 ZNF827Q17R98 1081 aa12.93□□□□□ -0.34
NSMCE1-203ENST00000562039 AMER1Q5JTC6 1135 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-203ENST00000562039 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
NSMCE1-203ENST00000562039 ATF5Q9Y2D1 282 aaPredicted RBP12.93□□□□□ -0.34
NSMCE1-203ENST00000562039 NSD2O96028 1365 aa12.93□□□□□ -0.34
NSMCE1-203ENST00000562039 PCDH11XQ9BZA7 1347 aa12.92□□□□□ -0.34
NSMCE1-203ENST00000562039 PCDH11YQ9BZA8 1340 aa12.92□□□□□ -0.34
NSMCE1-203ENST00000562039 SLC15A2Q16348 729 aa12.92□□□□□ -0.34
NSMCE1-203ENST00000562039 AEBP1Q8IUX7 1158 aa12.92□□□□□ -0.34
NSMCE1-203ENST00000562039 RGPD3A6NKT7 1758 aaPredicted RBP12.92□□□□□ -0.34
NSMCE1-203ENST00000562039 RGPD4Q7Z3J3 1758 aa12.92□□□□□ -0.34
NSMCE1-203ENST00000562039 LRP5O75197 1615 aa12.91□□□□□ -0.34
NSMCE1-203ENST00000562039 PER1O15534 1290 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-203ENST00000562039 PPP1R1BQ9UD71 204 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-203ENST00000562039 SPG7Q9UQ90 795 aa12.9□□□□□ -0.34
NSMCE1-203ENST00000562039 MTHFSP49914 203 aa12.89□□□□□ -0.35
NSMCE1-203ENST00000562039 SPON1Q9HCB6 807 aa12.89□□□□□ -0.35
NSMCE1-203ENST00000562039 CCNL1Q9UK58 526 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-203ENST00000562039 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
NSMCE1-203ENST00000562039 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
NSMCE1-203ENST00000562039 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
NSMCE1-203ENST00000562039 IGSF1Q8N6C5 1336 aa12.88□□□□□ -0.35
NSMCE1-203ENST00000562039 HMOX1P09601 288 aa12.87□□□□□ -0.35
NSMCE1-203ENST00000562039 PHKG2P15735 406 aa12.87□□□□□ -0.35
NSMCE1-203ENST00000562039 IL13P35225 146 aa12.87□□□□□ -0.35
NSMCE1-203ENST00000562039 PKD1L3Q7Z443 1732 aa12.87□□□□□ -0.35
NSMCE1-203ENST00000562039 MSH5O43196 834 aa12.86□□□□□ -0.35
NSMCE1-203ENST00000562039 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-203ENST00000562039 SMIM5Q71RC9 77 aa12.86□□□□□ -0.35
NSMCE1-203ENST00000562039 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
NSMCE1-203ENST00000562039 PIGBQ92521 554 aa12.86□□□□□ -0.35
NSMCE1-203ENST00000562039 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
NSMCE1-203ENST00000562039 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
NSMCE1-203ENST00000562039 PALLDQ8WX93 1383 aa12.85□□□□□ -0.35
NSMCE1-203ENST00000562039 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
NSMCE1-203ENST00000562039 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
NSMCE1-203ENST00000562039 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
NSMCE1-203ENST00000562039 ITGB4P16144 1822 aa12.85□□□□□ -0.35
NSMCE1-203ENST00000562039 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
NSMCE1-203ENST00000562039 TMOD3Q9NYL9 352 aa12.84□□□□□ -0.35
NSMCE1-203ENST00000562039 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
NSMCE1-203ENST00000562039 KLHL34Q8N239 644 aa12.83□□□□□ -0.36
NSMCE1-203ENST00000562039 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
NSMCE1-203ENST00000562039 LY75O60449 1722 aa12.82□□□□□ -0.36
NSMCE1-203ENST00000562039 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-203ENST00000562039 PTGER2P43116 358 aa12.82□□□□□ -0.36
NSMCE1-203ENST00000562039 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
NSMCE1-203ENST00000562039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.36
NSMCE1-203ENST00000562039 TUBGCP6Q96RT7 1819 aa12.81□□□□□ -0.36
NSMCE1-203ENST00000562039 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-203ENST00000562039 PHF14O94880 888 aa12.81□□□□□ -0.36
NSMCE1-203ENST00000562039 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
NSMCE1-203ENST00000562039 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
NSMCE1-203ENST00000562039 MTFR1LQ9H019 292 aa12.81□□□□□ -0.36
NSMCE1-203ENST00000562039 CABP4P57796 275 aa12.8□□□□□ -0.36
NSMCE1-203ENST00000562039 AMIGO3Q86WK7 504 aa12.8□□□□□ -0.36
NSMCE1-203ENST00000562039 COL23A1Q86Y22 540 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-203ENST00000562039 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-203ENST00000562039 ATG3Q9NT62 314 aa12.8□□□□□ -0.36
NSMCE1-203ENST00000562039 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-203ENST00000562039 LOC102724428A0A0B4J2F2 783 aa12.79□□□□□ -0.36
NSMCE1-203ENST00000562039 SIK1P57059 783 aa12.79□□□□□ -0.36
NSMCE1-203ENST00000562039 ITPK1Q13572 414 aa12.79□□□□□ -0.36
NSMCE1-203ENST00000562039 AMOTQ4VCS5 1084 aa12.79□□□□□ -0.36
NSMCE1-203ENST00000562039 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
NSMCE1-203ENST00000562039 SMARCC1Q92922 1105 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-203ENST00000562039 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
NSMCE1-203ENST00000562039 AK7Q96M32 723 aa12.78□□□□□ -0.36
NSMCE1-203ENST00000562039 FHDC1Q9C0D6 1143 aaPredicted RBP12.78□□□□□ -0.36
NSMCE1-203ENST00000562039 C5P01031 1676 aa12.77□□□□□ -0.36
NSMCE1-203ENST00000562039 PPP2R1AP30153 589 aa12.77□□□□□ -0.37
NSMCE1-203ENST00000562039 MTHFSDQ2M296 383 aaKnown RBP12.77□□□□□ -0.37
NSMCE1-203ENST00000562039 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
NSMCE1-203ENST00000562039 DCAF5Q96JK2 942 aa12.77□□□□□ -0.37
NSMCE1-203ENST00000562039 ARXQ96QS3 562 aa12.77□□□□□ -0.37
NSMCE1-203ENST00000562039 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
NSMCE1-203ENST00000562039 LGR6Q9HBX8 967 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms