RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CDCA8Q53HL2 280 aa35.25■■■■□ 3.23
NME3-202ENST00000561637 QSER1Q2KHR3 1735 aa35.24■■■■□ 3.23
NME3-202ENST00000561637 RRS1Q15050 365 aaKnown RBP35.24■■■■□ 3.23
NME3-202ENST00000561637 COL24A1Q17RW2 1714 aa35.23■■■■□ 3.23
NME3-202ENST00000561637 TUBGCP6Q96RT7 1819 aa35.22■■■■□ 3.23
NME3-202ENST00000561637 GOLGB1Q14789 3259 aaKnown RBP35.22■■■■□ 3.23
NME3-202ENST00000561637 HOXC9P31274 260 aa35.22■■■■□ 3.23
NME3-202ENST00000561637 KIF20BQ96Q89 1820 aa35.21■■■■□ 3.23
NME3-202ENST00000561637 NSD3Q9BZ95 1437 aa35.21■■■■□ 3.23
NME3-202ENST00000561637 GPR162Q16538 588 aa35.2■■■■□ 3.23
NME3-202ENST00000561637 AKT1S1Q96B36 256 aa35.2■■■■□ 3.23
NME3-202ENST00000561637 HSPA5P11021 654 aaKnown RBP35.19■■■■□ 3.22
NME3-202ENST00000561637 AMPHP49418 695 aa35.19■■■■□ 3.22
NME3-202ENST00000561637 POLR3GLQ9BT43 218 aa35.18■■■■□ 3.22
NME3-202ENST00000561637 KLHL34Q8N239 644 aa35.17■■■■□ 3.22
NME3-202ENST00000561637 RGPD2P0DJD1 1756 aa35.17■■■■□ 3.22
NME3-202ENST00000561637 PNPLA7Q6ZV29 1317 aa35.13■■■■□ 3.21
NME3-202ENST00000561637 KCNQ4P56696 695 aa35.13■■■■□ 3.21
NME3-202ENST00000561637 FAM208AQ9UK61 1670 aaKnown RBP35.13■■■■□ 3.21
NME3-202ENST00000561637 SLC16A10Q8TF71 515 aa35.12■■■■□ 3.21
NME3-202ENST00000561637 EIF4G2P78344 907 aaKnown RBP eCLIP35.11■■■■□ 3.21
NME3-202ENST00000561637 DDX54Q8TDD1 881 aaKnown RBP35.11■■■■□ 3.21
NME3-202ENST00000561637 PELP1Q8IZL8 1130 aaKnown RBP35.1■■■■□ 3.21
NME3-202ENST00000561637 RTL1A6NKG5 1358 aa35.1■■■■□ 3.21
NME3-202ENST00000561637 SLC27A3Q5K4L6 730 aa35.09■■■■□ 3.21
NME3-202ENST00000561637 LY75O60449 1722 aa35.09■■■■□ 3.21
NME3-202ENST00000561637 NLGN2Q8NFZ4 835 aa35.08■■■■□ 3.21
NME3-202ENST00000561637 DOT1LQ8TEK3 1739 aa35.08■■■■□ 3.21
NME3-202ENST00000561637 SHANK3Q9BYB0 1731 aa35.07■■■■□ 3.2
NME3-202ENST00000561637 POLD1P28340 1107 aa35.07■■■■□ 3.2
NME3-202ENST00000561637 USHBP1Q8N6Y0 703 aa35.07■■■■□ 3.2
NME3-202ENST00000561637 HSP90AB2PQ58FF8 381 aa35.06■■■■□ 3.2
NME3-202ENST00000561637 MEGF6O75095 1541 aa35.06■■■■□ 3.2
NME3-202ENST00000561637 NBPF6Q5VWK0 638 aa35.05■■■■□ 3.2
NME3-202ENST00000561637 NBPF4Q96M43 638 aa35.05■■■■□ 3.2
NME3-202ENST00000561637 TFCP2L1Q9NZI6 479 aa35.05■■■■□ 3.2
NME3-202ENST00000561637 GIGYF1O75420 1035 aaPredicted RBP35.04■■■■□ 3.2
NME3-202ENST00000561637 EMILIN1Q9Y6C2 1016 aa35.04■■■■□ 3.2
NME3-202ENST00000561637 PRIM1P49642 420 aaKnown RBP35.02■■■■□ 3.2
NME3-202ENST00000561637 SYTL4Q96C24 671 aaPredicted RBP35.02■■■■□ 3.2
NME3-202ENST00000561637 NSD2O96028 1365 aa35■■■■□ 3.19
NME3-202ENST00000561637 CEP350Q5VT06 3117 aa34.99■■■■□ 3.19
NME3-202ENST00000561637 INSRP06213 1382 aa34.98■■■■□ 3.19
NME3-202ENST00000561637 FLT4P35916 1363 aa34.98■■■■□ 3.19
NME3-202ENST00000561637 YBX3P16989 372 aaKnown RBP eCLIP34.97■■■■□ 3.19
NME3-202ENST00000561637 CGNL1Q0VF96 1302 aa34.96■■■■□ 3.19
NME3-202ENST00000561637 SMG6Q86US8 1419 aaKnown RBP34.93■■■■□ 3.18
NME3-202ENST00000561637 PANK3Q9H999 370 aa34.93■■■■□ 3.18
NME3-202ENST00000561637 PPM1GO15355 546 aaPredicted RBP34.92■■■■□ 3.18
NME3-202ENST00000561637 COL23A1Q86Y22 540 aaPredicted RBP34.91■■■■□ 3.18
NME3-202ENST00000561637 ANKRD26Q9UPS8 1709 aa34.9■■■■□ 3.18
NME3-202ENST00000561637 ZCRB1Q8TBF4 217 aaKnown RBP34.9■■■■□ 3.18
NME3-202ENST00000561637 CCNL1Q9UK58 526 aaPredicted RBP34.9■■■■□ 3.18
NME3-202ENST00000561637 KIF24Q5T7B8 1368 aa34.89■■■■□ 3.18
NME3-202ENST00000561637 TNNT2P45379 298 aaPredicted RBP34.89■■■■□ 3.18
NME3-202ENST00000561637 MSH5O43196 834 aa34.87■■■■□ 3.17
NME3-202ENST00000561637 MAP2P11137 1827 aaKnown RBP34.87■■■■□ 3.17
NME3-202ENST00000561637 IFFO2Q5TF58 517 aa34.86■■■■□ 3.17
NME3-202ENST00000561637 POLKQ9UBT6 870 aa34.86■■■■□ 3.17
NME3-202ENST00000561637 GRIN3BO60391 1043 aa34.85■■■■□ 3.17
NME3-202ENST00000561637 MSL1Q68DK7 614 aa34.85■■■■□ 3.17
NME3-202ENST00000561637 RAPGEF4Q8WZA2 1011 aa34.84■■■■□ 3.17
NME3-202ENST00000561637 C5P01031 1676 aa34.83■■■■□ 3.17
NME3-202ENST00000561637 TAF1LQ8IZX4 1826 aa34.82■■■■□ 3.16
NME3-202ENST00000561637 WASHC2AQ641Q2 1341 aa34.81■■■■□ 3.16
NME3-202ENST00000561637 TATP17735 454 aaPredicted RBP34.81■■■■□ 3.16
NME3-202ENST00000561637 ATP10DQ9P241 1426 aa34.8■■■■□ 3.16
NME3-202ENST00000561637 NCAPD2Q15021 1401 aa34.79■■■■□ 3.16
NME3-202ENST00000561637 KIF7Q2M1P5 1343 aa34.79■■■■□ 3.16
NME3-202ENST00000561637 EYA1Q99502 592 aa34.76■■■■□ 3.16
NME3-202ENST00000561637 CYP27B1O15528 508 aa34.74■■■■□ 3.15
NME3-202ENST00000561637 EIF4A2Q14240 407 aaKnown RBP34.73■■■■□ 3.15
NME3-202ENST00000561637 CD2APQ9Y5K6 639 aa34.71■■■■□ 3.15
NME3-202ENST00000561637 PKD1L3Q7Z443 1732 aa34.71■■■■□ 3.15
NME3-202ENST00000561637 PCDH11XQ9BZA7 1347 aa34.7■■■■□ 3.15
NME3-202ENST00000561637 PCDH11YQ9BZA8 1340 aa34.7■■■■□ 3.15
NME3-202ENST00000561637 ITGB4P16144 1822 aa34.69■■■■□ 3.14
NME3-202ENST00000561637 TOGARAM1Q9Y4F4 1720 aa34.69■■■■□ 3.14
NME3-202ENST00000561637 C4BP0C0L5 1744 aa34.67■■■■□ 3.14
NME3-202ENST00000561637 MORC1Q86VD1 984 aa34.66■■■■□ 3.14
NME3-202ENST00000561637 AMIGO3Q86WK7 504 aa34.66■■■■□ 3.14
NME3-202ENST00000561637 GPBP1L1Q9HC44 474 aaPredicted RBP34.66■■■■□ 3.14
NME3-202ENST00000561637 UBR3Q6ZT12 1888 aa34.65■■■■□ 3.14
NME3-202ENST00000561637 ADCY9O60503 1353 aa34.65■■■■□ 3.14
NME3-202ENST00000561637 PALLDQ8WX93 1383 aa34.65■■■■□ 3.14
NME3-202ENST00000561637 ZNF526Q8TF50 670 aaPredicted RBP34.64■■■■□ 3.14
NME3-202ENST00000561637 KNSTRNQ9Y448 316 aa34.64■■■■□ 3.14
NME3-202ENST00000561637 AMER1Q5JTC6 1135 aaPredicted RBP34.63■■■■□ 3.13
NME3-202ENST00000561637 MPRIPQ6WCQ1 1025 aa34.63■■■■□ 3.13
NME3-202ENST00000561637 SMIM5Q71RC9 77 aa34.63■■■■□ 3.13
NME3-202ENST00000561637 FLAD1Q8NFF5 587 aa34.62■■■■□ 3.13
NME3-202ENST00000561637 WWC3Q9ULE0 1092 aa34.61■■■■□ 3.13
NME3-202ENST00000561637 IGSF1Q8N6C5 1336 aa34.58■■■■□ 3.13
NME3-202ENST00000561637 HSPA6P17066 643 aa34.57■■■■□ 3.12
NME3-202ENST00000561637 SPG7Q9UQ90 795 aa34.56■■■■□ 3.12
NME3-202ENST00000561637 PHF14O94880 888 aa34.54■■■■□ 3.12
NME3-202ENST00000561637 AEBP1Q8IUX7 1158 aa34.54■■■■□ 3.12
NME3-202ENST00000561637 AK7Q96M32 723 aa34.54■■■■□ 3.12
NME3-202ENST00000561637 PER1O15534 1290 aaPredicted RBP34.53■■■■□ 3.12
NME3-202ENST00000561637 NKX1-1Q15270 411 aaPredicted RBP34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms