RNA–Protein interactions for RNA: ENST00000561588.2

AP005233.2-201, humanhuman

TSL 3 BASIC

Gene AP005233.2, Length 372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005233.2-201ENST00000561588 USP47Q96K76 1375 aa23.69■■□□□ 1.38
AP005233.2-201ENST00000561588 ZCRB1Q8TBF4 217 aaKnown RBP23.69■■□□□ 1.38
AP005233.2-201ENST00000561588 ARXQ96QS3 562 aa23.69■■□□□ 1.38
AP005233.2-201ENST00000561588 LY75O60449 1722 aa23.69■■□□□ 1.38
AP005233.2-201ENST00000561588 COL24A1Q17RW2 1714 aa23.68■■□□□ 1.38
AP005233.2-201ENST00000561588 SLC16A10Q8TF71 515 aa23.68■■□□□ 1.38
AP005233.2-201ENST00000561588 CGNL1Q0VF96 1302 aa23.67■■□□□ 1.38
AP005233.2-201ENST00000561588 PRIM1P49642 420 aaKnown RBP23.67■■□□□ 1.38
AP005233.2-201ENST00000561588 RRS1Q15050 365 aaKnown RBP23.66■■□□□ 1.38
AP005233.2-201ENST00000561588 NBPF6Q5VWK0 638 aa23.66■■□□□ 1.38
AP005233.2-201ENST00000561588 NBPF4Q96M43 638 aa23.66■■□□□ 1.38
AP005233.2-201ENST00000561588 GGNBP2Q9H3C7 697 aa23.66■■□□□ 1.38
AP005233.2-201ENST00000561588 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
AP005233.2-201ENST00000561588 PNPLA7Q6ZV29 1317 aa23.64■■□□□ 1.38
AP005233.2-201ENST00000561588 TUBGCP6Q96RT7 1819 aa23.64■■□□□ 1.38
AP005233.2-201ENST00000561588 SYTL4Q96C24 671 aaPredicted RBP23.64■■□□□ 1.37
AP005233.2-201ENST00000561588 SMG6Q86US8 1419 aaKnown RBP23.64■■□□□ 1.37
AP005233.2-201ENST00000561588 KIF20BQ96Q89 1820 aa23.63■■□□□ 1.37
AP005233.2-201ENST00000561588 CDCA8Q53HL2 280 aa23.63■■□□□ 1.37
AP005233.2-201ENST00000561588 INSRP06213 1382 aa23.63■■□□□ 1.37
AP005233.2-201ENST00000561588 CHD4Q14839 1912 aa23.63■■□□□ 1.37
AP005233.2-201ENST00000561588 TRIM26Q12899 539 aaPredicted RBP23.61■■□□□ 1.37
AP005233.2-201ENST00000561588 RAPGEF4Q8WZA2 1011 aa23.6■■□□□ 1.37
AP005233.2-201ENST00000561588 TFCP2L1Q9NZI6 479 aa23.6■■□□□ 1.37
AP005233.2-201ENST00000561588 FLT4P35916 1363 aa23.6■■□□□ 1.37
AP005233.2-201ENST00000561588 KCNQ4P56696 695 aa23.59■■□□□ 1.37
AP005233.2-201ENST00000561588 POLD1P28340 1107 aa23.58■■□□□ 1.37
AP005233.2-201ENST00000561588 HSP90AB2PQ58FF8 381 aa23.58■■□□□ 1.37
AP005233.2-201ENST00000561588 USHBP1Q8N6Y0 703 aa23.58■■□□□ 1.37
AP005233.2-201ENST00000561588 TATP17735 454 aaPredicted RBP23.57■■□□□ 1.36
AP005233.2-201ENST00000561588 ZNF784Q8NCA9 323 aaPredicted RBP23.57■■□□□ 1.36
AP005233.2-201ENST00000561588 CCNL1Q9UK58 526 aaPredicted RBP23.57■■□□□ 1.36
AP005233.2-201ENST00000561588 PCDH11XQ9BZA7 1347 aa23.56■■□□□ 1.36
AP005233.2-201ENST00000561588 PCDH11YQ9BZA8 1340 aa23.56■■□□□ 1.36
AP005233.2-201ENST00000561588 CARD14Q9BXL6 1004 aa23.55■■□□□ 1.36
AP005233.2-201ENST00000561588 TIMELESSQ9UNS1 1208 aa23.54■■□□□ 1.36
AP005233.2-201ENST00000561588 NCAPD2Q15021 1401 aa23.53■■□□□ 1.36
AP005233.2-201ENST00000561588 ANKRD26Q9UPS8 1709 aa23.53■■□□□ 1.36
AP005233.2-201ENST00000561588 NSD3Q9BZ95 1437 aa23.52■■□□□ 1.36
AP005233.2-201ENST00000561588 HMGB2P26583 209 aaKnown RBP23.52■■□□□ 1.36
AP005233.2-201ENST00000561588 C5P01031 1676 aa23.51■■□□□ 1.35
AP005233.2-201ENST00000561588 PKD1L3Q7Z443 1732 aa23.51■■□□□ 1.35
AP005233.2-201ENST00000561588 CYP27B1O15528 508 aa23.5■■□□□ 1.35
AP005233.2-201ENST00000561588 EMILIN1Q9Y6C2 1016 aa23.5■■□□□ 1.35
AP005233.2-201ENST00000561588 GOLGB1Q14789 3259 aaKnown RBP23.5■■□□□ 1.35
AP005233.2-201ENST00000561588 TAF1LQ8IZX4 1826 aa23.49■■□□□ 1.35
AP005233.2-201ENST00000561588 GPR162Q16538 588 aa23.49■■□□□ 1.35
AP005233.2-201ENST00000561588 COL23A1Q86Y22 540 aaPredicted RBP23.49■■□□□ 1.35
AP005233.2-201ENST00000561588 TOGARAM1Q9Y4F4 1720 aa23.48■■□□□ 1.35
AP005233.2-201ENST00000561588 ITGB4P16144 1822 aa23.47■■□□□ 1.35
AP005233.2-201ENST00000561588 PALLDQ8WX93 1383 aa23.47■■□□□ 1.35
AP005233.2-201ENST00000561588 WASHC2AQ641Q2 1341 aa23.46■■□□□ 1.35
AP005233.2-201ENST00000561588 KLHL34Q8N239 644 aa23.46■■□□□ 1.35
AP005233.2-201ENST00000561588 NKX1-1Q15270 411 aaPredicted RBP23.45■■□□□ 1.34
AP005233.2-201ENST00000561588 MPRIPQ6WCQ1 1025 aa23.45■■□□□ 1.34
AP005233.2-201ENST00000561588 NLGN2Q8NFZ4 835 aa23.45■■□□□ 1.34
AP005233.2-201ENST00000561588 MAP2P11137 1827 aaKnown RBP23.45■■□□□ 1.34
AP005233.2-201ENST00000561588 CLSPNQ9HAW4 1339 aa23.44■■□□□ 1.34
AP005233.2-201ENST00000561588 FLAD1Q8NFF5 587 aa23.44■■□□□ 1.34
AP005233.2-201ENST00000561588 SMARCC1Q92922 1105 aaPredicted RBP23.44■■□□□ 1.34
AP005233.2-201ENST00000561588 MSH5O43196 834 aa23.43■■□□□ 1.34
AP005233.2-201ENST00000561588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.42■■□□□ 1.34
AP005233.2-201ENST00000561588 C4BP0C0L5 1744 aa23.42■■□□□ 1.34
AP005233.2-201ENST00000561588 SPG7Q9UQ90 795 aa23.41■■□□□ 1.34
AP005233.2-201ENST00000561588 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
AP005233.2-201ENST00000561588 PIGBQ92521 554 aa23.4■■□□□ 1.34
AP005233.2-201ENST00000561588 PLEKHG2Q9H7P9 1386 aa23.4■■□□□ 1.34
AP005233.2-201ENST00000561588 EYA1Q99502 592 aa23.39■■□□□ 1.33
AP005233.2-201ENST00000561588 POLKQ9UBT6 870 aa23.39■■□□□ 1.33
AP005233.2-201ENST00000561588 UBR3Q6ZT12 1888 aa23.39■■□□□ 1.33
AP005233.2-201ENST00000561588 GRIN3BO60391 1043 aa23.37■■□□□ 1.33
AP005233.2-201ENST00000561588 MSL1Q68DK7 614 aa23.37■■□□□ 1.33
AP005233.2-201ENST00000561588 PELP1Q8IZL8 1130 aaKnown RBP23.37■■□□□ 1.33
AP005233.2-201ENST00000561588 CD2APQ9Y5K6 639 aa23.37■■□□□ 1.33
AP005233.2-201ENST00000561588 YBX3P16989 372 aaKnown RBP eCLIP23.36■■□□□ 1.33
AP005233.2-201ENST00000561588 AK7Q96M32 723 aa23.35■■□□□ 1.33
AP005233.2-201ENST00000561588 C1QTNF8P60827 252 aa23.34■■□□□ 1.33
AP005233.2-201ENST00000561588 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
AP005233.2-201ENST00000561588 LOC102724428A0A0B4J2F2 783 aa23.33■■□□□ 1.33
AP005233.2-201ENST00000561588 PHKG2P15735 406 aa23.33■■□□□ 1.33
AP005233.2-201ENST00000561588 SIK1P57059 783 aa23.33■■□□□ 1.33
AP005233.2-201ENST00000561588 IFNL2Q8IZJ0 200 aa23.33■■□□□ 1.33
AP005233.2-201ENST00000561588 SSFA2P28290 1259 aa23.32■■□□□ 1.32
AP005233.2-201ENST00000561588 EIF4A2Q14240 407 aaKnown RBP23.32■■□□□ 1.32
AP005233.2-201ENST00000561588 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
AP005233.2-201ENST00000561588 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
AP005233.2-201ENST00000561588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.29■■□□□ 1.32
AP005233.2-201ENST00000561588 ASAP1Q9ULH1 1129 aa23.29■■□□□ 1.32
AP005233.2-201ENST00000561588 IGSF1Q8N6C5 1336 aa23.29■■□□□ 1.32
AP005233.2-201ENST00000561588 PHF14O94880 888 aa23.27■■□□□ 1.32
AP005233.2-201ENST00000561588 ITPK1Q13572 414 aa23.27■■□□□ 1.32
AP005233.2-201ENST00000561588 ZNF831Q5JPB2 1677 aa23.26■■□□□ 1.31
AP005233.2-201ENST00000561588 GIGYF1O75420 1035 aaPredicted RBP23.26■■□□□ 1.31
AP005233.2-201ENST00000561588 EIF4G2P78344 907 aaKnown RBP eCLIP23.26■■□□□ 1.31
AP005233.2-201ENST00000561588 POLR3GLQ9BT43 218 aa23.26■■□□□ 1.31
AP005233.2-201ENST00000561588 ATG3Q9NT62 314 aa23.26■■□□□ 1.31
AP005233.2-201ENST00000561588 ATP6V1AP38606 617 aa23.25■■□□□ 1.31
AP005233.2-201ENST00000561588 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
AP005233.2-201ENST00000561588 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
AP005233.2-201ENST00000561588 KDRP35968 1356 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms