RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 MAP2P11137 1827 aaKnown RBP28.33■■■□□ 2.13
TPM1-232ENST00000561425 R3HDM1Q15032 1099 aaKnown RBP28.32■■■□□ 2.12
TPM1-232ENST00000561425 RAPGEF4Q8WZA2 1011 aa28.32■■■□□ 2.12
TPM1-232ENST00000561425 TNNT2P45379 298 aaPredicted RBP28.31■■■□□ 2.12
TPM1-232ENST00000561425 ACSBG1Q96GR2 724 aa28.31■■■□□ 2.12
TPM1-232ENST00000561425 NHSQ6T4R5 1651 aa28.31■■■□□ 2.12
TPM1-232ENST00000561425 NUP188Q5SRE5 1749 aa28.31■■■□□ 2.12
TPM1-232ENST00000561425 TATP17735 454 aaPredicted RBP28.3■■■□□ 2.12
TPM1-232ENST00000561425 MORC1Q86VD1 984 aa28.3■■■□□ 2.12
TPM1-232ENST00000561425 EYA1Q99502 592 aa28.3■■■□□ 2.12
TPM1-232ENST00000561425 NBPF14Q5TI25 921 aa28.29■■■□□ 2.12
TPM1-232ENST00000561425 EIF4A2Q14240 407 aaKnown RBP28.28■■■□□ 2.12
TPM1-232ENST00000561425 SHANK3Q9BYB0 1731 aa28.28■■■□□ 2.12
TPM1-232ENST00000561425 TXNRD1Q16881 649 aa28.27■■■□□ 2.12
TPM1-232ENST00000561425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.23■■■□□ 2.11
TPM1-232ENST00000561425 NPC1L1Q9UHC9 1359 aa28.23■■■□□ 2.11
TPM1-232ENST00000561425 SRCAPQ6ZRS2 3230 aa28.22■■■□□ 2.11
TPM1-232ENST00000561425 PCDH11XQ9BZA7 1347 aa28.21■■■□□ 2.11
TPM1-232ENST00000561425 PCDH11YQ9BZA8 1340 aa28.21■■■□□ 2.11
TPM1-232ENST00000561425 CYP27B1O15528 508 aa28.21■■■□□ 2.11
TPM1-232ENST00000561425 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
TPM1-232ENST00000561425 PLEKHG2Q9H7P9 1386 aa28.21■■■□□ 2.11
TPM1-232ENST00000561425 IGSF1Q8N6C5 1336 aa28.2■■■□□ 2.11
TPM1-232ENST00000561425 ANO8Q9HCE9 1232 aaPredicted RBP28.2■■■□□ 2.1
TPM1-232ENST00000561425 LRP5O75197 1615 aa28.19■■■□□ 2.1
TPM1-232ENST00000561425 NKX1-1Q15270 411 aaPredicted RBP28.18■■■□□ 2.1
TPM1-232ENST00000561425 BTAF1O14981 1849 aa28.18■■■□□ 2.1
TPM1-232ENST00000561425 PKD1L3Q7Z443 1732 aa28.16■■■□□ 2.1
TPM1-232ENST00000561425 SPG7Q9UQ90 795 aa28.15■■■□□ 2.1
TPM1-232ENST00000561425 IL13P35225 146 aa28.14■■■□□ 2.1
TPM1-232ENST00000561425 LRRC4BQ9NT99 713 aa28.14■■■□□ 2.1
TPM1-232ENST00000561425 MTHFSP49914 203 aa28.12■■■□□ 2.09
TPM1-232ENST00000561425 SLC15A2Q16348 729 aa28.12■■■□□ 2.09
TPM1-232ENST00000561425 SLC27A3Q5K4L6 730 aa28.12■■■□□ 2.09
TPM1-232ENST00000561425 CC2D1BQ5T0F9 858 aaKnown RBP28.12■■■□□ 2.09
TPM1-232ENST00000561425 SYTL4Q96C24 671 aaPredicted RBP28.12■■■□□ 2.09
TPM1-232ENST00000561425 DOT1LQ8TEK3 1739 aa28.11■■■□□ 2.09
TPM1-232ENST00000561425 STK32BQ9NY57 414 aa28.09■■■□□ 2.09
TPM1-232ENST00000561425 PAPPAQ13219 1627 aa28.09■■■□□ 2.09
TPM1-232ENST00000561425 PHKG2P15735 406 aa28.08■■■□□ 2.09
TPM1-232ENST00000561425 KDRP35968 1356 aa28.08■■■□□ 2.09
TPM1-232ENST00000561425 IFNL2Q8IZJ0 200 aa28.07■■■□□ 2.08
TPM1-232ENST00000561425 KAT6BQ8WYB5 2073 aa28.06■■■□□ 2.08
TPM1-232ENST00000561425 AKT1S1Q96B36 256 aa28.05■■■□□ 2.08
TPM1-232ENST00000561425 PDGFDQ9GZP0 370 aaPredicted RBP28.05■■■□□ 2.08
TPM1-232ENST00000561425 AEBP1Q8IUX7 1158 aa28.04■■■□□ 2.08
TPM1-232ENST00000561425 AMOTQ4VCS5 1084 aa28.03■■■□□ 2.08
TPM1-232ENST00000561425 CASZ1Q86V15 1759 aa28.03■■■□□ 2.08
TPM1-232ENST00000561425 LY75O60449 1722 aa28.02■■■□□ 2.08
TPM1-232ENST00000561425 PLEKHO1Q53GL0 409 aaPredicted RBP28.02■■■□□ 2.08
TPM1-232ENST00000561425 SULT6B1Q6IMI4 303 aa28.02■■■□□ 2.08
TPM1-232ENST00000561425 TOGARAM1Q9Y4F4 1720 aa28.01■■■□□ 2.07
TPM1-232ENST00000561425 ZNF827Q17R98 1081 aa28.01■■■□□ 2.07
TPM1-232ENST00000561425 MPRIPQ6WCQ1 1025 aa28.01■■■□□ 2.07
TPM1-232ENST00000561425 PIGBQ92521 554 aa28.01■■■□□ 2.07
TPM1-232ENST00000561425 SPON1Q9HCB6 807 aa28.01■■■□□ 2.07
TPM1-232ENST00000561425 KCNQ4P56696 695 aa27.98■■■□□ 2.07
TPM1-232ENST00000561425 DIAPH1O60610 1272 aaKnown RBP27.97■■■□□ 2.07
TPM1-232ENST00000561425 SMARCC1Q92922 1105 aaPredicted RBP27.97■■■□□ 2.07
TPM1-232ENST00000561425 CCNL1Q9UK58 526 aaPredicted RBP27.97■■■□□ 2.07
TPM1-232ENST00000561425 COL3A1P02461 1466 aaPredicted RBP27.95■■■□□ 2.07
TPM1-232ENST00000561425 ERVV-2B6SEH9 535 aa27.95■■■□□ 2.06
TPM1-232ENST00000561425 HSP90AB1P08238 724 aaKnown RBP27.95■■■□□ 2.06
TPM1-232ENST00000561425 DCAF5Q96JK2 942 aa27.95■■■□□ 2.06
TPM1-232ENST00000561425 PALLDQ8WX93 1383 aa27.95■■■□□ 2.06
TPM1-232ENST00000561425 ITGB4P16144 1822 aa27.95■■■□□ 2.06
TPM1-232ENST00000561425 HMGB2P26583 209 aaKnown RBP27.93■■■□□ 2.06
TPM1-232ENST00000561425 ZNF530Q6P9A1 599 aaPredicted RBP27.93■■■□□ 2.06
TPM1-232ENST00000561425 PTGER2P43116 358 aa27.92■■■□□ 2.06
TPM1-232ENST00000561425 TMOD3Q9NYL9 352 aa27.92■■■□□ 2.06
TPM1-232ENST00000561425 ZBTB7AO95365 584 aa27.91■■■□□ 2.06
TPM1-232ENST00000561425 SGIP1Q9BQI5 828 aa27.91■■■□□ 2.06
TPM1-232ENST00000561425 MTFR1LQ9H019 292 aa27.91■■■□□ 2.06
TPM1-232ENST00000561425 KDM6AO15550 1401 aaPredicted RBP27.91■■■□□ 2.06
TPM1-232ENST00000561425 PNPLA7Q6ZV29 1317 aa27.9■■■□□ 2.06
TPM1-232ENST00000561425 ATG3Q9NT62 314 aa27.89■■■□□ 2.06
TPM1-232ENST00000561425 ASAP1Q9ULH1 1129 aa27.89■■■□□ 2.06
TPM1-232ENST00000561425 HMOX1P09601 288 aa27.88■■■□□ 2.05
TPM1-232ENST00000561425 PPP2R1AP30153 589 aa27.88■■■□□ 2.05
TPM1-232ENST00000561425 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
TPM1-232ENST00000561425 SLC16A10Q8TF71 515 aa27.88■■■□□ 2.05
TPM1-232ENST00000561425 QSER1Q2KHR3 1735 aa27.87■■■□□ 2.05
TPM1-232ENST00000561425 TFCP2L1Q9NZI6 479 aa27.87■■■□□ 2.05
TPM1-232ENST00000561425 C1orf141Q5JVX7 400 aa27.86■■■□□ 2.05
TPM1-232ENST00000561425 ATF5Q9Y2D1 282 aaPredicted RBP27.86■■■□□ 2.05
TPM1-232ENST00000561425 LOC102724428A0A0B4J2F2 783 aa27.85■■■□□ 2.05
TPM1-232ENST00000561425 SIK1P57059 783 aa27.85■■■□□ 2.05
TPM1-232ENST00000561425 AKAP4Q5JQC9 854 aa27.85■■■□□ 2.05
TPM1-232ENST00000561425 MTHFSDQ2M296 383 aaKnown RBP27.82■■■□□ 2.04
TPM1-232ENST00000561425 CABP4P57796 275 aa27.81■■■□□ 2.04
TPM1-232ENST00000561425 CFAP53Q96M91 514 aa27.81■■■□□ 2.04
TPM1-232ENST00000561425 COL23A1Q86Y22 540 aaPredicted RBP27.8■■■□□ 2.04
TPM1-232ENST00000561425 PPP1R1BQ9UD71 204 aaPredicted RBP27.8■■■□□ 2.04
TPM1-232ENST00000561425 C5P01031 1676 aa27.8■■■□□ 2.04
TPM1-232ENST00000561425 TAF1LQ8IZX4 1826 aa27.79■■■□□ 2.04
TPM1-232ENST00000561425 ITPK1Q13572 414 aa27.79■■■□□ 2.04
TPM1-232ENST00000561425 SLC4A9Q96Q91 983 aa27.79■■■□□ 2.04
TPM1-232ENST00000561425 U2SURPO15042 1029 aaKnown RBP27.78■■■□□ 2.04
TPM1-232ENST00000561425 NFATC2IPQ8NCF5 419 aa27.78■■■□□ 2.04
TPM1-232ENST00000561425 LINC00116Q8NCU8 138 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms