RNA–Protein interactions for RNA: ENST00000561415.1

IRF9-215, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 1,769 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-215ENST00000561415 FBXO41Q8TF61 875 aa25.59■■□□□ 1.69
IRF9-215ENST00000561415 PKD1L3Q7Z443 1732 aa25.58■■□□□ 1.69
IRF9-215ENST00000561415 AMOTQ4VCS5 1084 aa25.58■■□□□ 1.69
IRF9-215ENST00000561415 PLEKHO1Q53GL0 409 aaPredicted RBP25.57■■□□□ 1.68
IRF9-215ENST00000561415 SLFN5Q08AF3 891 aa25.56■■□□□ 1.68
IRF9-215ENST00000561415 E9PSI1 815 aa25.56■■□□□ 1.68
IRF9-215ENST00000561415 TATP17735 454 aaPredicted RBP25.56■■□□□ 1.68
IRF9-215ENST00000561415 OVOS2A0A0G2JMS6 1433 aa25.55■■□□□ 1.68
IRF9-215ENST00000561415 C8orf37Q96NL8 207 aa25.55■■□□□ 1.68
IRF9-215ENST00000561415 SPINK5Q9NQ38 1064 aaPredicted RBP25.55■■□□□ 1.68
IRF9-215ENST00000561415 IL16Q14005 1332 aa25.55■■□□□ 1.68
IRF9-215ENST00000561415 MAP3K5Q99683 1374 aa25.54■■□□□ 1.68
IRF9-215ENST00000561415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.54■■□□□ 1.682e-6■□□□□ 11.2
IRF9-215ENST00000561415 TRMT2AQ8IZ69 625 aaKnown RBP25.54■■□□□ 1.68
IRF9-215ENST00000561415 HTATSF1O43719 755 aaKnown RBP25.53■■□□□ 1.68
IRF9-215ENST00000561415 DUSP27Q5VZP5 1158 aa25.53■■□□□ 1.68
IRF9-215ENST00000561415 NGLY1Q96IV0 654 aa25.53■■□□□ 1.68
IRF9-215ENST00000561415 WNK3Q9BYP7 1800 aa25.52■■□□□ 1.68
IRF9-215ENST00000561415 GNAT3A8MTJ3 354 aa25.52■■□□□ 1.68
IRF9-215ENST00000561415 CALD1Q05682 793 aaKnown RBP25.52■■□□□ 1.68
IRF9-215ENST00000561415 FNBP4Q8N3X1 1017 aaPredicted RBP25.52■■□□□ 1.68
IRF9-215ENST00000561415 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.52■■□□□ 1.68
IRF9-215ENST00000561415 ZNF530Q6P9A1 599 aaPredicted RBP25.51■■□□□ 1.67
IRF9-215ENST00000561415 LRRC37A3O60309 1634 aa25.51■■□□□ 1.67
IRF9-215ENST00000561415 BCL9LQ86UU0 1499 aa25.51■■□□□ 1.67
IRF9-215ENST00000561415 IL2RBP14784 551 aa25.51■■□□□ 1.67
IRF9-215ENST00000561415 THUMPD2Q9BTF0 503 aaKnown RBP25.51■■□□□ 1.67
IRF9-215ENST00000561415 DCTN1Q14203 1278 aa25.5■■□□□ 1.67
IRF9-215ENST00000561415 UNC5CLQ8IV45 518 aa25.5■■□□□ 1.67
IRF9-215ENST00000561415 RTF1Q92541 710 aaKnown RBP25.5■■□□□ 1.67
IRF9-215ENST00000561415 USP35Q9P2H5 1018 aa25.5■■□□□ 1.67
IRF9-215ENST00000561415 AKAP4Q5JQC9 854 aa25.49■■□□□ 1.67
IRF9-215ENST00000561415 SPG7Q9UQ90 795 aa25.49■■□□□ 1.67
IRF9-215ENST00000561415 DISP2A7MBM2 1401 aa25.49■■□□□ 1.67
IRF9-215ENST00000561415 MCM10Q7L590 875 aa25.49■■□□□ 1.67
IRF9-215ENST00000561415 VIRMAQ69YN4 1812 aaKnown RBP25.48■■□□□ 1.67
IRF9-215ENST00000561415 MEX3CQ5U5Q3 659 aaKnown RBP25.48■■□□□ 1.67
IRF9-215ENST00000561415 MYH16Q9H6N6 1097 aa25.48■■□□□ 1.67
IRF9-215ENST00000561415 SPATA31A1Q5TZJ5 1347 aa25.48■■□□□ 1.67
IRF9-215ENST00000561415 SHANK3Q9BYB0 1731 aa25.47■■□□□ 1.67
IRF9-215ENST00000561415 C1orf141Q5JVX7 400 aa25.46■■□□□ 1.67
IRF9-215ENST00000561415 SPATA31A5Q5VU36 1347 aa25.46■■□□□ 1.67
IRF9-215ENST00000561415 SPATA31A7Q8IWB4 1347 aa25.46■■□□□ 1.67
IRF9-215ENST00000561415 ADAMTS7Q9UKP4 1686 aa25.46■■□□□ 1.67
IRF9-215ENST00000561415 THRAP3Q9Y2W1 955 aaKnown RBP25.46■■□□□ 1.67
IRF9-215ENST00000561415 IFT57Q9NWB7 429 aa25.45■■□□□ 1.66
IRF9-215ENST00000561415 CEMIPQ8WUJ3 1361 aa25.44■■□□□ 1.66
IRF9-215ENST00000561415 ZNF853P0CG23 659 aa25.44■■□□□ 1.66
IRF9-215ENST00000561415 IL17REQ8NFR9 667 aa25.44■■□□□ 1.66
IRF9-215ENST00000561415 FANCIQ9NVI1 1328 aa25.43■■□□□ 1.66
IRF9-215ENST00000561415 GNAI1P63096 354 aa25.43■■□□□ 1.66
IRF9-215ENST00000561415 VPS72Q15906 364 aa25.43■■□□□ 1.66
IRF9-215ENST00000561415 ZCRB1Q8TBF4 217 aaKnown RBP25.43■■□□□ 1.66
IRF9-215ENST00000561415 CFAP44Q96MT7 982 aa25.43■■□□□ 1.66
IRF9-215ENST00000561415 USP21Q9UK80 565 aa25.43■■□□□ 1.66
IRF9-215ENST00000561415 PCDH11XQ9BZA7 1347 aa25.42■■□□□ 1.66
IRF9-215ENST00000561415 PCDH11YQ9BZA8 1340 aa25.42■■□□□ 1.66
IRF9-215ENST00000561415 PHKG2P15735 406 aa25.42■■□□□ 1.66
IRF9-215ENST00000561415 SCN11AQ9UI33 1791 aa25.42■■□□□ 1.66
IRF9-215ENST00000561415 CYP27B1O15528 508 aa25.41■■□□□ 1.66
IRF9-215ENST00000561415 IFNL2Q8IZJ0 200 aa25.41■■□□□ 1.66
IRF9-215ENST00000561415 TSR2Q969E8 191 aaKnown RBP25.41■■□□□ 1.66
IRF9-215ENST00000561415 CDCA7Q9BWT1 371 aaPredicted RBP25.4■■□□□ 1.66
IRF9-215ENST00000561415 AFF2P51816 1311 aa25.39■■□□□ 1.66
IRF9-215ENST00000561415 CCDC9Q9Y3X0 531 aaKnown RBP25.39■■□□□ 1.66
IRF9-215ENST00000561415 MPRIPQ6WCQ1 1025 aa25.39■■□□□ 1.65
IRF9-215ENST00000561415 BARGINQ6ZT62 677 aa25.39■■□□□ 1.65
IRF9-215ENST00000561415 LAS1LQ9Y4W2 734 aaKnown RBP25.39■■□□□ 1.65
IRF9-215ENST00000561415 KDM6AO15550 1401 aaPredicted RBP25.38■■□□□ 1.65
IRF9-215ENST00000561415 RNMTO43148 476 aaKnown RBP25.38■■□□□ 1.65
IRF9-215ENST00000561415 LGR6Q9HBX8 967 aa25.38■■□□□ 1.65
IRF9-215ENST00000561415 CHL1O00533 1208 aa25.37■■□□□ 1.65
IRF9-215ENST00000561415 MBIPQ9NS73 344 aa25.37■■□□□ 1.65
IRF9-215ENST00000561415 TNS2Q63HR2 1409 aa25.37■■□□□ 1.65
IRF9-215ENST00000561415 SIPA1L3O60292 1781 aaPredicted RBP25.37■■□□□ 1.65
IRF9-215ENST00000561415 HSP90AB1P08238 724 aaKnown RBP25.36■■□□□ 1.65
IRF9-215ENST00000561415 DCAF5Q96JK2 942 aa25.35■■□□□ 1.65
IRF9-215ENST00000561415 RCAN3Q9UKA8 241 aa25.34■■□□□ 1.65
IRF9-215ENST00000561415 ATRNO75882 1429 aa25.34■■□□□ 1.65
IRF9-215ENST00000561415 MRC1P22897 1456 aa25.34■■□□□ 1.65
IRF9-215ENST00000561415 BABAM1Q9NWV8 329 aa25.33■■□□□ 1.65
IRF9-215ENST00000561415 NKX1-1Q15270 411 aaPredicted RBP25.33■■□□□ 1.65
IRF9-215ENST00000561415 TAF7Q15545 349 aaPredicted RBP25.33■■□□□ 1.65
IRF9-215ENST00000561415 TEFQ10587 303 aa25.32■■□□□ 1.64
IRF9-215ENST00000561415 GLI3P10071 1580 aa25.32■■□□□ 1.64
IRF9-215ENST00000561415 KDM3BQ7LBC6 1761 aa25.31■■□□□ 1.64
IRF9-215ENST00000561415 EXOC5O00471 708 aa25.31■■□□□ 1.64
IRF9-215ENST00000561415 EXOSC9Q06265 439 aaKnown RBP25.31■■□□□ 1.64
IRF9-215ENST00000561415 DDX54Q8TDD1 881 aaKnown RBP25.31■■□□□ 1.64
IRF9-215ENST00000561415 CT47B1P0C2W7 299 aaPredicted RBP25.31■■□□□ 1.64
IRF9-215ENST00000561415 TSPYL4Q9UJ04 414 aa25.31■■□□□ 1.64
IRF9-215ENST00000561415 TRPC5Q9UL62 973 aaPredicted RBP25.3■■□□□ 1.64
IRF9-215ENST00000561415 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
IRF9-215ENST00000561415 THSD7AQ9UPZ6 1657 aa25.29■■□□□ 1.64
IRF9-215ENST00000561415 DDB1Q16531 1140 aa25.28■■□□□ 1.64
IRF9-215ENST00000561415 FAM98CQ17RN3 349 aaKnown RBP25.28■■□□□ 1.64
IRF9-215ENST00000561415 GJD4Q96KN9 370 aaPredicted RBP25.28■■□□□ 1.64
IRF9-215ENST00000561415 MIS18AQ9NYP9 233 aa25.28■■□□□ 1.64
IRF9-215ENST00000561415 SLC52A2Q9HAB3 445 aa25.28■■□□□ 1.64
IRF9-215ENST00000561415 TOGARAM1Q9Y4F4 1720 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms