RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 KIF24Q5T7B8 1368 aa22.62■■□□□ 1.21
CRTC3-212ENST00000561218 CGNL1Q0VF96 1302 aa22.61■■□□□ 1.21
CRTC3-212ENST00000561218 TATP17735 454 aaPredicted RBP22.61■■□□□ 1.21
CRTC3-212ENST00000561218 MEGF6O75095 1541 aa22.61■■□□□ 1.21
CRTC3-212ENST00000561218 PPM1GO15355 546 aaPredicted RBP22.6■■□□□ 1.21
CRTC3-212ENST00000561218 ATF5Q9Y2D1 282 aaPredicted RBP22.6■■□□□ 1.21
CRTC3-212ENST00000561218 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
CRTC3-212ENST00000561218 EMILIN1Q9Y6C2 1016 aa22.59■■□□□ 1.21
CRTC3-212ENST00000561218 BTAF1O14981 1849 aa22.59■■□□□ 1.21
CRTC3-212ENST00000561218 SLC27A3Q5K4L6 730 aa22.58■■□□□ 1.21
CRTC3-212ENST00000561218 LRRC4BQ9NT99 713 aa22.58■■□□□ 1.21
CRTC3-212ENST00000561218 MYOM1P52179 1685 aa22.58■■□□□ 1.2
CRTC3-212ENST00000561218 DCAF8L1A6NGE4 600 aa22.57■■□□□ 1.2
CRTC3-212ENST00000561218 HSPA5P11021 654 aaKnown RBP22.57■■□□□ 1.2
CRTC3-212ENST00000561218 RGPD2P0DJD1 1756 aa22.57■■□□□ 1.2
CRTC3-212ENST00000561218 CASZ1Q86V15 1759 aa22.57■■□□□ 1.2
CRTC3-212ENST00000561218 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
CRTC3-212ENST00000561218 PTGER2P43116 358 aa22.55■■□□□ 1.2
CRTC3-212ENST00000561218 ZNF827Q17R98 1081 aa22.54■■□□□ 1.2
CRTC3-212ENST00000561218 WASHC2AQ641Q2 1341 aa22.52■■□□□ 1.2
CRTC3-212ENST00000561218 PCDH11XQ9BZA7 1347 aa22.52■■□□□ 1.2
CRTC3-212ENST00000561218 PCDH11YQ9BZA8 1340 aa22.52■■□□□ 1.2
CRTC3-212ENST00000561218 TNNT2P45379 298 aaPredicted RBP22.51■■□□□ 1.19
CRTC3-212ENST00000561218 KCNQ4P56696 695 aa22.51■■□□□ 1.19
CRTC3-212ENST00000561218 AKT1S1Q96B36 256 aa22.51■■□□□ 1.19
CRTC3-212ENST00000561218 NSD2O96028 1365 aa22.5■■□□□ 1.19
CRTC3-212ENST00000561218 PANK3Q9H999 370 aa22.5■■□□□ 1.19
CRTC3-212ENST00000561218 POLKQ9UBT6 870 aa22.5■■□□□ 1.19
CRTC3-212ENST00000561218 PAPPAQ13219 1627 aa22.49■■□□□ 1.19
CRTC3-212ENST00000561218 TFCP2L1Q9NZI6 479 aa22.49■■□□□ 1.19
CRTC3-212ENST00000561218 CCNL1Q9UK58 526 aaPredicted RBP22.49■■□□□ 1.19
CRTC3-212ENST00000561218 DOT1LQ8TEK3 1739 aa22.48■■□□□ 1.19
CRTC3-212ENST00000561218 SHANK3Q9BYB0 1731 aa22.48■■□□□ 1.19
CRTC3-212ENST00000561218 CYP27B1O15528 508 aa22.47■■□□□ 1.19
CRTC3-212ENST00000561218 SPG7Q9UQ90 795 aa22.47■■□□□ 1.19
CRTC3-212ENST00000561218 SLC16A10Q8TF71 515 aa22.46■■□□□ 1.19
CRTC3-212ENST00000561218 ARXQ96QS3 562 aa22.46■■□□□ 1.19
CRTC3-212ENST00000561218 EYA1Q99502 592 aa22.46■■□□□ 1.19
CRTC3-212ENST00000561218 SGIP1Q9BQI5 828 aa22.46■■□□□ 1.19
CRTC3-212ENST00000561218 MPRIPQ6WCQ1 1025 aa22.45■■□□□ 1.18
CRTC3-212ENST00000561218 FHDC1Q9C0D6 1143 aaPredicted RBP22.45■■□□□ 1.18
CRTC3-212ENST00000561218 SYT17Q9BSW7 474 aa22.44■■□□□ 1.18
CRTC3-212ENST00000561218 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
CRTC3-212ENST00000561218 YY1P25490 414 aa22.43■■□□□ 1.18
CRTC3-212ENST00000561218 NCAPD2Q15021 1401 aa22.42■■□□□ 1.18
CRTC3-212ENST00000561218 HMGB2P26583 209 aaKnown RBP22.42■■□□□ 1.18
CRTC3-212ENST00000561218 EIF4A2Q14240 407 aaKnown RBP22.42■■□□□ 1.18
CRTC3-212ENST00000561218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.42■■□□□ 1.18
CRTC3-212ENST00000561218 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
CRTC3-212ENST00000561218 MSH5O43196 834 aa22.4■■□□□ 1.18
CRTC3-212ENST00000561218 POLD1P28340 1107 aa22.4■■□□□ 1.18
CRTC3-212ENST00000561218 NKX1-1Q15270 411 aaPredicted RBP22.4■■□□□ 1.18
CRTC3-212ENST00000561218 MORC1Q86VD1 984 aa22.4■■□□□ 1.18
CRTC3-212ENST00000561218 SMARCC1Q92922 1105 aaPredicted RBP22.4■■□□□ 1.18
CRTC3-212ENST00000561218 ANKRD26Q9UPS8 1709 aa22.4■■□□□ 1.18
CRTC3-212ENST00000561218 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.17
CRTC3-212ENST00000561218 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
CRTC3-212ENST00000561218 LY75O60449 1722 aa22.38■■□□□ 1.17
CRTC3-212ENST00000561218 IFNL2Q8IZJ0 200 aa22.37■■□□□ 1.17
CRTC3-212ENST00000561218 PIGBQ92521 554 aa22.37■■□□□ 1.17
CRTC3-212ENST00000561218 COL23A1Q86Y22 540 aaPredicted RBP22.35■■□□□ 1.17
CRTC3-212ENST00000561218 KLHL34Q8N239 644 aa22.35■■□□□ 1.17
CRTC3-212ENST00000561218 TMOD3Q9NYL9 352 aa22.35■■□□□ 1.17
CRTC3-212ENST00000561218 PKD1L3Q7Z443 1732 aa22.34■■□□□ 1.17
CRTC3-212ENST00000561218 PHKG2P15735 406 aa22.34■■□□□ 1.17
CRTC3-212ENST00000561218 QSER1Q2KHR3 1735 aa22.33■■□□□ 1.17
CRTC3-212ENST00000561218 MAP3K5Q99683 1374 aa22.33■■□□□ 1.17
CRTC3-212ENST00000561218 IGSF1Q8N6C5 1336 aa22.32■■□□□ 1.16
CRTC3-212ENST00000561218 FLAD1Q8NFF5 587 aa22.32■■□□□ 1.16
CRTC3-212ENST00000561218 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
CRTC3-212ENST00000561218 PLEKHO1Q53GL0 409 aaPredicted RBP22.3■■□□□ 1.16
CRTC3-212ENST00000561218 AK7Q96M32 723 aa22.3■■□□□ 1.16
CRTC3-212ENST00000561218 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
CRTC3-212ENST00000561218 PLEKHG2Q9H7P9 1386 aa22.29■■□□□ 1.16
CRTC3-212ENST00000561218 ASAP1Q9ULH1 1129 aa22.29■■□□□ 1.16
CRTC3-212ENST00000561218 LOC102724428A0A0B4J2F2 783 aa22.28■■□□□ 1.16
CRTC3-212ENST00000561218 SIK1P57059 783 aa22.28■■□□□ 1.16
CRTC3-212ENST00000561218 MSL1Q68DK7 614 aa22.28■■□□□ 1.16
CRTC3-212ENST00000561218 TUBGCP6Q96RT7 1819 aa22.28■■□□□ 1.16
CRTC3-212ENST00000561218 ITGB4P16144 1822 aa22.27■■□□□ 1.16
CRTC3-212ENST00000561218 HSP90AB1P08238 724 aaKnown RBP22.27■■□□□ 1.16
CRTC3-212ENST00000561218 GPR162Q16538 588 aa22.27■■□□□ 1.16
CRTC3-212ENST00000561218 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
CRTC3-212ENST00000561218 AMOTQ4VCS5 1084 aa22.26■■□□□ 1.15
CRTC3-212ENST00000561218 ZNF530Q6P9A1 599 aaPredicted RBP22.26■■□□□ 1.15
CRTC3-212ENST00000561218 C5P01031 1676 aa22.26■■□□□ 1.15
CRTC3-212ENST00000561218 ERVV-2B6SEH9 535 aa22.25■■□□□ 1.15
CRTC3-212ENST00000561218 AEBP1Q8IUX7 1158 aa22.25■■□□□ 1.15
CRTC3-212ENST00000561218 DCAF5Q96JK2 942 aa22.25■■□□□ 1.15
CRTC3-212ENST00000561218 ATG3Q9NT62 314 aa22.25■■□□□ 1.15
CRTC3-212ENST00000561218 ATP6V1AP38606 617 aa22.24■■□□□ 1.15
CRTC3-212ENST00000561218 SULT6B1Q6IMI4 303 aa22.24■■□□□ 1.15
CRTC3-212ENST00000561218 PHF14O94880 888 aa22.23■■□□□ 1.15
CRTC3-212ENST00000561218 PELP1Q8IZL8 1130 aaKnown RBP22.23■■□□□ 1.15
CRTC3-212ENST00000561218 LINC00116Q8NCU8 138 aa22.23■■□□□ 1.15
CRTC3-212ENST00000561218 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.22■■□□□ 1.15
CRTC3-212ENST00000561218 IL13P35225 146 aa22.22■■□□□ 1.15
CRTC3-212ENST00000561218 C1orf141Q5JVX7 400 aa22.22■■□□□ 1.15
CRTC3-212ENST00000561218 NLGN2Q8NFZ4 835 aa22.22■■□□□ 1.15
CRTC3-212ENST00000561218 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms