RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 USHBP1Q8N6Y0 703 aa22.06■■□□□ 1.12
HDDC3-206ENST00000561036 LRRC59Q96AG4 307 aaKnown RBP22.06■■□□□ 1.12
HDDC3-206ENST00000561036 RGPD2P0DJD1 1756 aa22.05■■□□□ 1.12
HDDC3-206ENST00000561036 KIAA0232Q92628 1395 aa22.05■■□□□ 1.12
HDDC3-206ENST00000561036 PLEKHO1Q53GL0 409 aaPredicted RBP22.05■■□□□ 1.12
HDDC3-206ENST00000561036 MCM10Q7L590 875 aa22.05■■□□□ 1.12
HDDC3-206ENST00000561036 CCDC136Q96JN2 1154 aa22.05■■□□□ 1.12
HDDC3-206ENST00000561036 AHDC1Q5TGY3 1603 aaPredicted RBP22.05■■□□□ 1.12
HDDC3-206ENST00000561036 RGPD5Q99666 1765 aa22.04■■□□□ 1.12
HDDC3-206ENST00000561036 MS4A1P11836 297 aa22.04■■□□□ 1.12
HDDC3-206ENST00000561036 CANXP27824 592 aaKnown RBP22.04■■□□□ 1.12
HDDC3-206ENST00000561036 HAP1P54257 671 aaPredicted RBP22.04■■□□□ 1.12
HDDC3-206ENST00000561036 BRPF1P55201 1214 aaPredicted RBP22.04■■□□□ 1.12
HDDC3-206ENST00000561036 C20orf194Q5TEA3 1177 aa22.04■■□□□ 1.12
HDDC3-206ENST00000561036 BABAM1Q9NWV8 329 aa22.04■■□□□ 1.12
HDDC3-206ENST00000561036 LRRC37A3O60309 1634 aa22.04■■□□□ 1.12
HDDC3-206ENST00000561036 B4GALNT3Q6L9W6 998 aa22.03■■□□□ 1.12
HDDC3-206ENST00000561036 ROBO1Q9Y6N7 1651 aa22.02■■□□□ 1.12
HDDC3-206ENST00000561036 ABCA3Q99758 1704 aa22.02■■□□□ 1.12
HDDC3-206ENST00000561036 VAMP4O75379 141 aa22.01■■□□□ 1.11
HDDC3-206ENST00000561036 SSH1Q8WYL5 1049 aa22.01■■□□□ 1.11
HDDC3-206ENST00000561036 SMC4Q9NTJ3 1288 aa22.01■■□□□ 1.11
HDDC3-206ENST00000561036 AAMPQ13685 434 aa22■■□□□ 1.11
HDDC3-206ENST00000561036 ZKSCAN2Q63HK3 967 aa22■■□□□ 1.11
HDDC3-206ENST00000561036 KIF16BQ96L93 1317 aa22■■□□□ 1.11
HDDC3-206ENST00000561036 AKAP4Q5JQC9 854 aa21.99■■□□□ 1.11
HDDC3-206ENST00000561036 FRAT1Q92837 279 aaPredicted RBP21.99■■□□□ 1.11
HDDC3-206ENST00000561036 PRDM11Q9NQV5 511 aa21.99■■□□□ 1.11
HDDC3-206ENST00000561036 OVOS2A0A0G2JMS6 1433 aa21.98■■□□□ 1.11
HDDC3-206ENST00000561036 IPO8O15397 1037 aaKnown RBP21.98■■□□□ 1.11
HDDC3-206ENST00000561036 CHRNA2Q15822 529 aa21.98■■□□□ 1.11
HDDC3-206ENST00000561036 TWISTNBQ3B726 338 aaPredicted RBP21.98■■□□□ 1.11
HDDC3-206ENST00000561036 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
HDDC3-206ENST00000561036 CEMIPQ8WUJ3 1361 aa21.98■■□□□ 1.11
HDDC3-206ENST00000561036 CSB-PGBD3P0DP91 1061 aa21.97■■□□□ 1.11
HDDC3-206ENST00000561036 IL17REQ8NFR9 667 aa21.97■■□□□ 1.11
HDDC3-206ENST00000561036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.97■■□□□ 1.11
HDDC3-206ENST00000561036 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
HDDC3-206ENST00000561036 C8orf58Q8NAV2 365 aa21.96■■□□□ 1.11
HDDC3-206ENST00000561036 RAPGEF4Q8WZA2 1011 aa21.96■■□□□ 1.11
HDDC3-206ENST00000561036 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
HDDC3-206ENST00000561036 SOS1Q07889 1333 aaPredicted RBP21.96■■□□□ 1.11
HDDC3-206ENST00000561036 TAF7Q15545 349 aaPredicted RBP21.95■■□□□ 1.1
HDDC3-206ENST00000561036 TSPYL6Q8N831 410 aa21.95■■□□□ 1.1
HDDC3-206ENST00000561036 TSPYL4Q9UJ04 414 aa21.95■■□□□ 1.1
HDDC3-206ENST00000561036 COL22A1Q8NFW1 1626 aaPredicted RBP21.95■■□□□ 1.1
HDDC3-206ENST00000561036 TATP17735 454 aaPredicted RBP21.94■■□□□ 1.1
HDDC3-206ENST00000561036 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
HDDC3-206ENST00000561036 ARHGAP45Q92619 1136 aa21.94■■□□□ 1.1
HDDC3-206ENST00000561036 TOM1O60784 492 aa21.93■■□□□ 1.1
HDDC3-206ENST00000561036 ATF7IPQ6VMQ6 1270 aa21.93■■□□□ 1.1
HDDC3-206ENST00000561036 WDR17Q8IZU2 1322 aa21.93■■□□□ 1.1
HDDC3-206ENST00000561036 MRPL50Q8N5N7 158 aaKnown RBP21.93■■□□□ 1.1
HDDC3-206ENST00000561036 DZIP1LQ8IYY4 767 aaKnown RBP21.92■■□□□ 1.1
HDDC3-206ENST00000561036 PANK1Q8TE04 598 aa21.92■■□□□ 1.1
HDDC3-206ENST00000561036 SPG7Q9UQ90 795 aa21.92■■□□□ 1.1
HDDC3-206ENST00000561036 COL5A2P05997 1499 aaPredicted RBP21.91■■□□□ 1.1
HDDC3-206ENST00000561036 NOB1Q9ULX3 412 aaKnown RBP21.91■■□□□ 1.1
HDDC3-206ENST00000561036 FTSJ3Q8IY81 847 aaKnown RBP21.9■■□□□ 1.1
HDDC3-206ENST00000561036 TRIM27P14373 513 aa21.89■■□□□ 1.09
HDDC3-206ENST00000561036 COG6Q9Y2V7 657 aa21.89■■□□□ 1.09
HDDC3-206ENST00000561036 ADAMTS7Q9UKP4 1686 aa21.88■■□□□ 1.09
HDDC3-206ENST00000561036 ELL2O00472 640 aaPredicted RBP21.88■■□□□ 1.09
HDDC3-206ENST00000561036 RNMTO43148 476 aaKnown RBP21.88■■□□□ 1.09
HDDC3-206ENST00000561036 RLBP1P12271 317 aa21.88■■□□□ 1.09
HDDC3-206ENST00000561036 MEGF6O75095 1541 aa21.87■■□□□ 1.09
HDDC3-206ENST00000561036 MVPQ14764 893 aaKnown RBP21.87■■□□□ 1.09
HDDC3-206ENST00000561036 CARD10Q9BWT7 1032 aa21.87■■□□□ 1.09
HDDC3-206ENST00000561036 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
HDDC3-206ENST00000561036 PKD1L3Q7Z443 1732 aa21.86■■□□□ 1.09
HDDC3-206ENST00000561036 TEFQ10587 303 aa21.86■■□□□ 1.09
HDDC3-206ENST00000561036 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
HDDC3-206ENST00000561036 LGR6Q9HBX8 967 aa21.86■■□□□ 1.09
HDDC3-206ENST00000561036 COL16A1Q07092 1604 aaPredicted RBP21.86■■□□□ 1.09
HDDC3-206ENST00000561036 COL14A1Q05707 1796 aaKnown RBP21.86■■□□□ 1.09
HDDC3-206ENST00000561036 PHLPP1O60346 1717 aa21.86■■□□□ 1.09
HDDC3-206ENST00000561036 TOM1L2Q6ZVM7 507 aa21.85■■□□□ 1.09
HDDC3-206ENST00000561036 CLUAP1Q96AJ1 413 aa21.85■■□□□ 1.09
HDDC3-206ENST00000561036 PARP4Q9UKK3 1724 aaKnown RBP21.84■■□□□ 1.09
HDDC3-206ENST00000561036 MPRIPQ6WCQ1 1025 aa21.84■■□□□ 1.09
HDDC3-206ENST00000561036 IFNL2Q8IZJ0 200 aa21.84■■□□□ 1.09
HDDC3-206ENST00000561036 API5Q9BZZ5 524 aaKnown RBP21.84■■□□□ 1.09
HDDC3-206ENST00000561036 TNNQ9UQP3 1299 aa21.84■■□□□ 1.09
HDDC3-206ENST00000561036 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
HDDC3-206ENST00000561036 PHKG2P15735 406 aa21.83■■□□□ 1.09
HDDC3-206ENST00000561036 EVA1CP58658 441 aa21.83■■□□□ 1.09
HDDC3-206ENST00000561036 KRT24Q2M2I5 525 aa21.83■■□□□ 1.09
HDDC3-206ENST00000561036 DDX19BQ9UMR2 479 aa21.83■■□□□ 1.09
HDDC3-206ENST00000561036 KDM3BQ7LBC6 1761 aa21.82■■□□□ 1.08
HDDC3-206ENST00000561036 HOXB7P09629 217 aa21.82■■□□□ 1.08
HDDC3-206ENST00000561036 CENPQQ7L2Z9 268 aaPredicted RBP21.82■■□□□ 1.08
HDDC3-206ENST00000561036 CHMP4BQ9H444 224 aaKnown RBP21.82■■□□□ 1.08
HDDC3-206ENST00000561036 PTPRCP08575 1304 aa21.8■■□□□ 1.08
HDDC3-206ENST00000561036 KDM2BQ8NHM5 1336 aa21.8■■□□□ 1.08
HDDC3-206ENST00000561036 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
HDDC3-206ENST00000561036 VIRMAQ69YN4 1812 aaKnown RBP21.8■■□□□ 1.08
HDDC3-206ENST00000561036 SIPA1L3O60292 1781 aaPredicted RBP21.79■■□□□ 1.08
HDDC3-206ENST00000561036 BTBD11A6QL63 1104 aa21.79■■□□□ 1.08
HDDC3-206ENST00000561036 CCDC30Q5VVM6 783 aa21.79■■□□□ 1.08
HDDC3-206ENST00000561036 DCAF5Q96JK2 942 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms