RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 FHOD3Q2V2M9 1422 aa8.53□□□□□ -1.04
HMG20A-212ENST00000560986 KIAA0556O60303 1618 aa8.52□□□□□ -1.05
HMG20A-212ENST00000560986 ABL2P42684 1182 aa8.52□□□□□ -1.05
HMG20A-212ENST00000560986 ZNF777Q9ULD5 760 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-212ENST00000560986 NDUFB9Q9Y6M9 179 aa8.52□□□□□ -1.05
HMG20A-212ENST00000560986 VARSP26640 1264 aaKnown RBP8.51□□□□□ -1.05
HMG20A-212ENST00000560986 WWC1Q8IX03 1113 aa8.51□□□□□ -1.05
HMG20A-212ENST00000560986 HOMEZQ8IX15 550 aa8.51□□□□□ -1.05
HMG20A-212ENST00000560986 MPNDQ8N594 471 aa8.51□□□□□ -1.05
HMG20A-212ENST00000560986 TRIM34Q9BYJ4 488 aa8.51□□□□□ -1.05
HMG20A-212ENST00000560986 ZNF330Q9Y3S2 320 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-212ENST00000560986 ACIN1Q9UKV3 1341 aaKnown RBP8.51□□□□□ -1.05
HMG20A-212ENST00000560986 EHBP1L1Q8N3D4 1523 aa8.5□□□□□ -1.05
HMG20A-212ENST00000560986 DISP1Q96F81 1524 aa8.5□□□□□ -1.05
HMG20A-212ENST00000560986 CEP170Q5SW79 1584 aa8.5□□□□□ -1.05
HMG20A-212ENST00000560986 ARID3AQ99856 593 aa8.5□□□□□ -1.05
HMG20A-212ENST00000560986 STK17AQ9UEE5 414 aa8.5□□□□□ -1.05
HMG20A-212ENST00000560986 CLSPNQ9HAW4 1339 aa8.5□□□□□ -1.05
HMG20A-212ENST00000560986 PER1O15534 1290 aaPredicted RBP8.49□□□□□ -1.05
HMG20A-212ENST00000560986 CTHP32929 405 aa8.49□□□□□ -1.05
HMG20A-212ENST00000560986 INSM1Q01101 510 aaPredicted RBP8.49□□□□□ -1.05
HMG20A-212ENST00000560986 NNTQ13423 1086 aa8.49□□□□□ -1.05
HMG20A-212ENST00000560986 MAP10Q9P2G4 905 aa8.49□□□□□ -1.05
HMG20A-212ENST00000560986 NXF1Q9UBU9 619 aaKnown RBP8.49□□□□□ -1.05
HMG20A-212ENST00000560986 CCNB3Q8WWL7 1395 aa8.48□□□□□ -1.05
HMG20A-212ENST00000560986 F12P00748 615 aaPredicted RBP8.48□□□□□ -1.05
HMG20A-212ENST00000560986 CCDC82Q8N4S0 544 aa8.48□□□□□ -1.05
HMG20A-212ENST00000560986 EPS8L1Q8TE68 723 aa8.48□□□□□ -1.05
HMG20A-212ENST00000560986 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
HMG20A-212ENST00000560986 ZFP42Q96MM3 310 aa8.48□□□□□ -1.05
HMG20A-212ENST00000560986 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
HMG20A-212ENST00000560986 ARHGEF11O15085 1522 aa8.46□□□□□ -1.05
HMG20A-212ENST00000560986 EPRSP07814 1512 aaKnown RBP8.46□□□□□ -1.05
HMG20A-212ENST00000560986 GPR37L1O60883 481 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 TIMP2P16035 220 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 VEGFBP49765 207 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 IRF5Q13568 498 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 NR6A1Q15406 480 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 CDK11AQ9UQ88 783 aaPredicted RBP8.46□□□□□ -1.06
HMG20A-212ENST00000560986 SHROOM2Q13796 1616 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 MTUS2Q5JR59 1369 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 MIA2Q96PC5 1412 aa8.46□□□□□ -1.06
HMG20A-212ENST00000560986 RANGAP1P46060 587 aaPredicted RBP8.45□□□□□ -1.06
HMG20A-212ENST00000560986 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
HMG20A-212ENST00000560986 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
HMG20A-212ENST00000560986 FAM174AQ8TBP5 190 aa8.45□□□□□ -1.06
HMG20A-212ENST00000560986 SLC16A10Q8TF71 515 aa8.45□□□□□ -1.06
HMG20A-212ENST00000560986 CDK15Q96Q40 435 aa8.45□□□□□ -1.06
HMG20A-212ENST00000560986 SUPT6HQ7KZ85 1726 aaKnown RBP8.44□□□□□ -1.06
HMG20A-212ENST00000560986 ADH1CP00326 375 aa8.44□□□□□ -1.06
HMG20A-212ENST00000560986 GMPRP36959 345 aa8.44□□□□□ -1.06
HMG20A-212ENST00000560986 WDR4P57081 412 aaKnown RBP8.44□□□□□ -1.06
HMG20A-212ENST00000560986 RAPGEF6Q8TEU7 1601 aa8.43□□□□□ -1.06
HMG20A-212ENST00000560986 POM121CA8CG34 1229 aa8.43□□□□□ -1.06
HMG20A-212ENST00000560986 H3BM21 787 aa8.43□□□□□ -1.06
HMG20A-212ENST00000560986 LORP23490 312 aaPredicted RBP8.43□□□□□ -1.06
HMG20A-212ENST00000560986 WASHC4Q2M389 1173 aa8.43□□□□□ -1.06
HMG20A-212ENST00000560986 MRPL14Q6P1L8 145 aaKnown RBP8.43□□□□□ -1.06
HMG20A-212ENST00000560986 NPAS3Q8IXF0 933 aa8.43□□□□□ -1.06
HMG20A-212ENST00000560986 MYOM3Q5VTT5 1437 aa8.43□□□□□ -1.06
HMG20A-212ENST00000560986 GRM5P41594 1212 aa8.42□□□□□ -1.06
HMG20A-212ENST00000560986 ARID5BQ14865 1188 aa8.42□□□□□ -1.06
HMG20A-212ENST00000560986 CCDC97Q96F63 343 aaPredicted RBP8.42□□□□□ -1.06
HMG20A-212ENST00000560986 PURBQ96QR8 312 aaKnown RBP8.42□□□□□ -1.06
HMG20A-212ENST00000560986 SERPINA10Q9UK55 444 aa8.42□□□□□ -1.06
HMG20A-212ENST00000560986 ABCA8O94911 1581 aa8.41□□□□□ -1.06
HMG20A-212ENST00000560986 NUP153P49790 1475 aaKnown RBP8.41□□□□□ -1.06
HMG20A-212ENST00000560986 FGD6Q6ZV73 1430 aa8.41□□□□□ -1.06
HMG20A-212ENST00000560986 AKNAQ7Z591 1439 aa8.41□□□□□ -1.06
HMG20A-212ENST00000560986 ERBB4Q15303 1308 aa8.41□□□□□ -1.06
HMG20A-212ENST00000560986 NR3C2P08235 984 aa8.41□□□□□ -1.06
HMG20A-212ENST00000560986 IRF7Q92985 503 aa8.41□□□□□ -1.06
HMG20A-212ENST00000560986 CLASP1Q7Z460 1538 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 TCOF1Q13428 1488 aaKnown RBP8.4□□□□□ -1.06
HMG20A-212ENST00000560986 NCOA2Q15596 1464 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 PHLDB1Q86UU1 1377 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 SOBPA7XYQ1 873 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 PNMA1Q8ND90 353 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 GLMNQ92990 594 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 ITPKCQ96DU7 683 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 CALR3Q96L12 384 aaKnown RBP8.4□□□□□ -1.06
HMG20A-212ENST00000560986 ZFAND3Q9H8U3 227 aa8.4□□□□□ -1.06
HMG20A-212ENST00000560986 TROQ12816 1431 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-212ENST00000560986 VAC14Q08AM6 782 aa8.39□□□□□ -1.07
HMG20A-212ENST00000560986 SCARF1Q14162 830 aa8.39□□□□□ -1.07
HMG20A-212ENST00000560986 ADCY10Q96PN6 1610 aa8.39□□□□□ -1.07
HMG20A-212ENST00000560986 CHD1O14646 1710 aa8.38□□□□□ -1.07
HMG20A-212ENST00000560986 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-212ENST00000560986 NR5A1Q13285 461 aa8.38□□□□□ -1.07
HMG20A-212ENST00000560986 AGERQ15109 404 aa8.38□□□□□ -1.07
HMG20A-212ENST00000560986 BPHLQ86WA6 291 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-212ENST00000560986 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
HMG20A-212ENST00000560986 UHRF1BP1LA0JNW5 1464 aa8.38□□□□□ -1.07
HMG20A-212ENST00000560986 PTPRGP23470 1445 aa8.37□□□□□ -1.07
HMG20A-212ENST00000560986 PRG4Q92954 1404 aaPredicted RBP8.37□□□□□ -1.07
HMG20A-212ENST00000560986 LRRIQ1Q96JM4 1722 aa8.37□□□□□ -1.07
HMG20A-212ENST00000560986 HDGFL1Q5TGJ6 251 aa8.36□□□□□ -1.07
HMG20A-212ENST00000560986 SH3RF1Q7Z6J0 888 aa8.36□□□□□ -1.07
HMG20A-212ENST00000560986 ADAMTS19Q8TE59 1207 aa8.36□□□□□ -1.07
HMG20A-212ENST00000560986 C1QTNF2Q9BXJ5 285 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms