RNA–Protein interactions for RNA: ENST00000560954.5

USP8-214, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-214ENST00000560954 LY75O60449 1722 aa17.04■□□□□ 0.32
USP8-214ENST00000560954 LTV1Q96GA3 475 aaPredicted RBP17.03■□□□□ 0.32
USP8-214ENST00000560954 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
USP8-214ENST00000560954 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.32
USP8-214ENST00000560954 ITGB4P16144 1822 aa17.01■□□□□ 0.31
USP8-214ENST00000560954 EN1Q05925 392 aaPredicted RBP17.01■□□□□ 0.31
USP8-214ENST00000560954 PLSCR1O15162 318 aa17■□□□□ 0.31
USP8-214ENST00000560954 QSER1Q2KHR3 1735 aa17■□□□□ 0.31
USP8-214ENST00000560954 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
USP8-214ENST00000560954 CASZ1Q86V15 1759 aa16.98■□□□□ 0.31
USP8-214ENST00000560954 APBA3O96018 575 aa16.98■□□□□ 0.31
USP8-214ENST00000560954 KAT6BQ8WYB5 2073 aa16.97■□□□□ 0.31
USP8-214ENST00000560954 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
USP8-214ENST00000560954 COL3A1P02461 1466 aaPredicted RBP16.97■□□□□ 0.31
USP8-214ENST00000560954 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
USP8-214ENST00000560954 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
USP8-214ENST00000560954 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
USP8-214ENST00000560954 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.3
USP8-214ENST00000560954 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.3
USP8-214ENST00000560954 KDRP35968 1356 aa16.95■□□□□ 0.3
USP8-214ENST00000560954 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
USP8-214ENST00000560954 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
USP8-214ENST00000560954 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
USP8-214ENST00000560954 EYA1Q99502 592 aa16.95■□□□□ 0.3
USP8-214ENST00000560954 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
USP8-214ENST00000560954 PPM1GO15355 546 aaPredicted RBP16.93■□□□□ 0.3
USP8-214ENST00000560954 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
USP8-214ENST00000560954 TNNT2P45379 298 aaPredicted RBP16.93■□□□□ 0.3
USP8-214ENST00000560954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.35e-8■■■■■ 37.3
USP8-214ENST00000560954 TAF1LQ8IZX4 1826 aa16.93■□□□□ 0.3
USP8-214ENST00000560954 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
USP8-214ENST00000560954 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
USP8-214ENST00000560954 KCNQ2O43526 872 aa16.91■□□□□ 0.3
USP8-214ENST00000560954 SRCAPQ6ZRS2 3230 aa16.91■□□□□ 0.3
USP8-214ENST00000560954 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
USP8-214ENST00000560954 SCN11AQ9UI33 1791 aa16.9■□□□□ 0.3
USP8-214ENST00000560954 C5P01031 1676 aa16.9■□□□□ 0.3
USP8-214ENST00000560954 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
USP8-214ENST00000560954 CYP27B1O15528 508 aa16.89■□□□□ 0.29
USP8-214ENST00000560954 NKX1-1Q15270 411 aaPredicted RBP16.89■□□□□ 0.29
USP8-214ENST00000560954 PROM2Q8N271 834 aa16.89■□□□□ 0.29
USP8-214ENST00000560954 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
USP8-214ENST00000560954 IL13P35225 146 aa16.88■□□□□ 0.29
USP8-214ENST00000560954 DDX54Q8TDD1 881 aaKnown RBP16.88■□□□□ 0.29
USP8-214ENST00000560954 ACSBG1Q96GR2 724 aa16.87■□□□□ 0.29
USP8-214ENST00000560954 TXNRD1Q16881 649 aa16.86■□□□□ 0.29
USP8-214ENST00000560954 CC2D1BQ5T0F9 858 aaKnown RBP16.86■□□□□ 0.29
USP8-214ENST00000560954 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
USP8-214ENST00000560954 MTHFSP49914 203 aa16.85■□□□□ 0.29
USP8-214ENST00000560954 ANO8Q9HCE9 1232 aaPredicted RBP16.85■□□□□ 0.29
USP8-214ENST00000560954 ADRA2BP18089 450 aa16.84■□□□□ 0.29
USP8-214ENST00000560954 PSDA5PKW4 1024 aaPredicted RBP16.83■□□□□ 0.28
USP8-214ENST00000560954 MRC1P22897 1456 aa16.83■□□□□ 0.28
USP8-214ENST00000560954 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
USP8-214ENST00000560954 NBPF14Q5TI25 921 aa16.83■□□□□ 0.28
USP8-214ENST00000560954 KDM6AO15550 1401 aaPredicted RBP16.82■□□□□ 0.28
USP8-214ENST00000560954 PHKG2P15735 406 aa16.82■□□□□ 0.28
USP8-214ENST00000560954 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
USP8-214ENST00000560954 SLC27A3Q5K4L6 730 aa16.82■□□□□ 0.28
USP8-214ENST00000560954 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
USP8-214ENST00000560954 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
USP8-214ENST00000560954 IFNL2Q8IZJ0 200 aa16.81■□□□□ 0.28
USP8-214ENST00000560954 SIPA1L3O60292 1781 aaPredicted RBP16.81■□□□□ 0.28
USP8-214ENST00000560954 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
USP8-214ENST00000560954 C4BP0C0L5 1744 aa16.8■□□□□ 0.28
USP8-214ENST00000560954 AMOTQ4VCS5 1084 aa16.8■□□□□ 0.28
USP8-214ENST00000560954 LRRC4BQ9NT99 713 aa16.79■□□□□ 0.28
USP8-214ENST00000560954 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
USP8-214ENST00000560954 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
USP8-214ENST00000560954 UBR2Q8IWV8 1755 aa16.78■□□□□ 0.28
USP8-214ENST00000560954 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
USP8-214ENST00000560954 SLC15A2Q16348 729 aa16.77■□□□□ 0.28
USP8-214ENST00000560954 PLEKHO1Q53GL0 409 aaPredicted RBP16.77■□□□□ 0.28
USP8-214ENST00000560954 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
USP8-214ENST00000560954 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
USP8-214ENST00000560954 PPP2R1AP30153 589 aa16.76■□□□□ 0.27
USP8-214ENST00000560954 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
USP8-214ENST00000560954 TJP1Q07157 1748 aa16.76■□□□□ 0.27
USP8-214ENST00000560954 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
USP8-214ENST00000560954 DCAF5Q96JK2 942 aa16.75■□□□□ 0.27
USP8-214ENST00000560954 STK32BQ9NY57 414 aa16.75■□□□□ 0.27
USP8-214ENST00000560954 ERVV-2B6SEH9 535 aa16.74■□□□□ 0.27
USP8-214ENST00000560954 ZNF827Q17R98 1081 aa16.74■□□□□ 0.27
USP8-214ENST00000560954 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
USP8-214ENST00000560954 PIGBQ92521 554 aa16.74■□□□□ 0.27
USP8-214ENST00000560954 HMGB2P26583 209 aaKnown RBP16.73■□□□□ 0.27
USP8-214ENST00000560954 SMARCC1Q92922 1105 aaPredicted RBP16.73■□□□□ 0.27
USP8-214ENST00000560954 TMOD3Q9NYL9 352 aa16.72■□□□□ 0.27
USP8-214ENST00000560954 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
USP8-214ENST00000560954 MPRIPQ6WCQ1 1025 aa16.71■□□□□ 0.27
USP8-214ENST00000560954 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
USP8-214ENST00000560954 CCNL1Q9UK58 526 aaPredicted RBP16.71■□□□□ 0.27
USP8-214ENST00000560954 AKAP4Q5JQC9 854 aa16.7■□□□□ 0.26
USP8-214ENST00000560954 C1orf141Q5JVX7 400 aa16.7■□□□□ 0.26
USP8-214ENST00000560954 HMOX1P09601 288 aa16.69■□□□□ 0.26
USP8-214ENST00000560954 C4AP0C0L4 1744 aa16.69■□□□□ 0.26
USP8-214ENST00000560954 PNPLA7Q6ZV29 1317 aa16.69■□□□□ 0.26
USP8-214ENST00000560954 MYH14Q7Z406 1995 aaKnown RBP16.68■□□□□ 0.26
USP8-214ENST00000560954 PDGFDQ9GZP0 370 aaPredicted RBP16.68■□□□□ 0.26
USP8-214ENST00000560954 RSPH6AQ9H0K4 717 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms