RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 POLKQ9UBT6 870 aa27.46■■□□□ 1.99
IPO4-215ENST00000560935 KNSTRNQ9Y448 316 aa27.46■■□□□ 1.99
IPO4-215ENST00000560935 KAT6BQ8WYB5 2073 aa27.45■■□□□ 1.99
IPO4-215ENST00000560935 SHANK3Q9BYB0 1731 aa27.45■■□□□ 1.99
IPO4-215ENST00000560935 KCNQ2O43526 872 aa27.45■■□□□ 1.98
IPO4-215ENST00000560935 TNNT2P45379 298 aaPredicted RBP27.45■■□□□ 1.98
IPO4-215ENST00000560935 TATP17735 454 aaPredicted RBP27.43■■□□□ 1.98
IPO4-215ENST00000560935 LRP5O75197 1615 aa27.42■■□□□ 1.98
IPO4-215ENST00000560935 BTAF1O14981 1849 aa27.41■■□□□ 1.98
IPO4-215ENST00000560935 MORC1Q86VD1 984 aa27.41■■□□□ 1.98
IPO4-215ENST00000560935 DOT1LQ8TEK3 1739 aa27.38■■□□□ 1.97
IPO4-215ENST00000560935 NCAPD2Q15021 1401 aa27.38■■□□□ 1.97
IPO4-215ENST00000560935 TXNRD1Q16881 649 aa27.37■■□□□ 1.97
IPO4-215ENST00000560935 PROM2Q8N271 834 aa27.37■■□□□ 1.97
IPO4-215ENST00000560935 PCDH11XQ9BZA7 1347 aa27.35■■□□□ 1.97
IPO4-215ENST00000560935 PCDH11YQ9BZA8 1340 aa27.35■■□□□ 1.97
IPO4-215ENST00000560935 EYA1Q99502 592 aa27.34■■□□□ 1.97
IPO4-215ENST00000560935 SRCAPQ6ZRS2 3230 aa27.34■■□□□ 1.97
IPO4-215ENST00000560935 PKD1L3Q7Z443 1732 aa27.33■■□□□ 1.97
IPO4-215ENST00000560935 EIF4A2Q14240 407 aaKnown RBP27.33■■□□□ 1.97
IPO4-215ENST00000560935 AMER1Q5JTC6 1135 aaPredicted RBP27.33■■□□□ 1.97
IPO4-215ENST00000560935 SYTL4Q96C24 671 aaPredicted RBP27.33■■□□□ 1.97
IPO4-215ENST00000560935 ANO8Q9HCE9 1232 aaPredicted RBP27.32■■□□□ 1.96
IPO4-215ENST00000560935 PRIM1P49642 420 aaKnown RBP27.31■■□□□ 1.96
IPO4-215ENST00000560935 STK32BQ9NY57 414 aa27.29■■□□□ 1.96
IPO4-215ENST00000560935 SPG7Q9UQ90 795 aa27.28■■□□□ 1.96
IPO4-215ENST00000560935 PER1O15534 1290 aaPredicted RBP27.27■■□□□ 1.96
IPO4-215ENST00000560935 CYP27B1O15528 508 aa27.26■■□□□ 1.95
IPO4-215ENST00000560935 IGSF1Q8N6C5 1336 aa27.25■■□□□ 1.95
IPO4-215ENST00000560935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.24■■□□□ 1.957e-6■■□□□ 12.8
IPO4-215ENST00000560935 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
IPO4-215ENST00000560935 PLEKHG2Q9H7P9 1386 aa27.23■■□□□ 1.95
IPO4-215ENST00000560935 SLC15A2Q16348 729 aa27.23■■□□□ 1.95
IPO4-215ENST00000560935 SLC27A3Q5K4L6 730 aa27.23■■□□□ 1.95
IPO4-215ENST00000560935 CASZ1Q86V15 1759 aa27.22■■□□□ 1.95
IPO4-215ENST00000560935 CC2D1BQ5T0F9 858 aaKnown RBP27.22■■□□□ 1.95
IPO4-215ENST00000560935 LY75O60449 1722 aa27.21■■□□□ 1.95
IPO4-215ENST00000560935 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
IPO4-215ENST00000560935 NPC1L1Q9UHC9 1359 aa27.21■■□□□ 1.95
IPO4-215ENST00000560935 SPON1Q9HCB6 807 aa27.19■■□□□ 1.94
IPO4-215ENST00000560935 LRRC4BQ9NT99 713 aa27.19■■□□□ 1.94
IPO4-215ENST00000560935 NKX1-1Q15270 411 aaPredicted RBP27.18■■□□□ 1.94
IPO4-215ENST00000560935 ITGB4P16144 1822 aa27.18■■□□□ 1.94
IPO4-215ENST00000560935 IFNL2Q8IZJ0 200 aa27.17■■□□□ 1.94
IPO4-215ENST00000560935 MTHFSP49914 203 aa27.16■■□□□ 1.94
IPO4-215ENST00000560935 MPRIPQ6WCQ1 1025 aa27.16■■□□□ 1.94
IPO4-215ENST00000560935 PHKG2P15735 406 aa27.15■■□□□ 1.94
IPO4-215ENST00000560935 CCNL1Q9UK58 526 aaPredicted RBP27.14■■□□□ 1.94
IPO4-215ENST00000560935 IL13P35225 146 aa27.13■■□□□ 1.93
IPO4-215ENST00000560935 CNGB1Q14028 1251 aaPredicted RBP27.13■■□□□ 1.93
IPO4-215ENST00000560935 ZNF827Q17R98 1081 aa27.13■■□□□ 1.93
IPO4-215ENST00000560935 PLEKHO1Q53GL0 409 aaPredicted RBP27.13■■□□□ 1.93
IPO4-215ENST00000560935 PDGFDQ9GZP0 370 aaPredicted RBP27.13■■□□□ 1.93
IPO4-215ENST00000560935 AEBP1Q8IUX7 1158 aa27.12■■□□□ 1.93
IPO4-215ENST00000560935 AMOTQ4VCS5 1084 aa27.11■■□□□ 1.93
IPO4-215ENST00000560935 SULT6B1Q6IMI4 303 aa27.11■■□□□ 1.93
IPO4-215ENST00000560935 PPP1R1BQ9UD71 204 aaPredicted RBP27.11■■□□□ 1.93
IPO4-215ENST00000560935 KDRP35968 1356 aa27.1■■□□□ 1.93
IPO4-215ENST00000560935 PALLDQ8WX93 1383 aa27.1■■□□□ 1.93
IPO4-215ENST00000560935 QSER1Q2KHR3 1735 aa27.1■■□□□ 1.93
IPO4-215ENST00000560935 ZBTB7AO95365 584 aa27.1■■□□□ 1.93
IPO4-215ENST00000560935 KCNQ4P56696 695 aa27.1■■□□□ 1.93
IPO4-215ENST00000560935 SMARCC1Q92922 1105 aaPredicted RBP27.1■■□□□ 1.93
IPO4-215ENST00000560935 AKT1S1Q96B36 256 aa27.1■■□□□ 1.93
IPO4-215ENST00000560935 HSP90AB1P08238 724 aaKnown RBP27.08■■□□□ 1.93
IPO4-215ENST00000560935 ZNF530Q6P9A1 599 aaPredicted RBP27.08■■□□□ 1.93
IPO4-215ENST00000560935 PIGBQ92521 554 aa27.08■■□□□ 1.93
IPO4-215ENST00000560935 TMOD3Q9NYL9 352 aa27.08■■□□□ 1.93
IPO4-215ENST00000560935 HMGB2P26583 209 aaKnown RBP27.07■■□□□ 1.92
IPO4-215ENST00000560935 C5P01031 1676 aa27.06■■□□□ 1.92
IPO4-215ENST00000560935 DIAPH1O60610 1272 aaKnown RBP27.06■■□□□ 1.92
IPO4-215ENST00000560935 MTFR1LQ9H019 292 aa27.06■■□□□ 1.92
IPO4-215ENST00000560935 TUBGCP6Q96RT7 1819 aa27.05■■□□□ 1.92
IPO4-215ENST00000560935 TFCP2L1Q9NZI6 479 aa27.05■■□□□ 1.92
IPO4-215ENST00000560935 ATF5Q9Y2D1 282 aaPredicted RBP27.05■■□□□ 1.92
IPO4-215ENST00000560935 C1orf141Q5JVX7 400 aa27.04■■□□□ 1.92
IPO4-215ENST00000560935 DCAF5Q96JK2 942 aa27.04■■□□□ 1.92
IPO4-215ENST00000560935 TAF1LQ8IZX4 1826 aa27.03■■□□□ 1.92
IPO4-215ENST00000560935 PNPLA7Q6ZV29 1317 aa27.01■■□□□ 1.91
IPO4-215ENST00000560935 ERVV-2B6SEH9 535 aa27.01■■□□□ 1.91
IPO4-215ENST00000560935 COL3A1P02461 1466 aaPredicted RBP27■■□□□ 1.91
IPO4-215ENST00000560935 HMOX1P09601 288 aa27■■□□□ 1.91
IPO4-215ENST00000560935 PTGER2P43116 358 aa27■■□□□ 1.91
IPO4-215ENST00000560935 KDM6AO15550 1401 aaPredicted RBP26.99■■□□□ 1.91
IPO4-215ENST00000560935 SLC16A10Q8TF71 515 aa26.99■■□□□ 1.91
IPO4-215ENST00000560935 ASAP1Q9ULH1 1129 aa26.97■■□□□ 1.91
IPO4-215ENST00000560935 C4BP0C0L5 1744 aa26.96■■□□□ 1.91
IPO4-215ENST00000560935 LOC102724428A0A0B4J2F2 783 aa26.96■■□□□ 1.91
IPO4-215ENST00000560935 SIK1P57059 783 aa26.96■■□□□ 1.91
IPO4-215ENST00000560935 CABP4P57796 275 aa26.96■■□□□ 1.91
IPO4-215ENST00000560935 CFAP53Q96M91 514 aa26.96■■□□□ 1.91
IPO4-215ENST00000560935 U2SURPO15042 1029 aaKnown RBP26.95■■□□□ 1.9
IPO4-215ENST00000560935 ATG3Q9NT62 314 aa26.95■■□□□ 1.9
IPO4-215ENST00000560935 AKAP4Q5JQC9 854 aa26.94■■□□□ 1.9
IPO4-215ENST00000560935 SGIP1Q9BQI5 828 aa26.94■■□□□ 1.9
IPO4-215ENST00000560935 SCN11AQ9UI33 1791 aa26.94■■□□□ 1.9
IPO4-215ENST00000560935 MSH5O43196 834 aa26.92■■□□□ 1.9
IPO4-215ENST00000560935 AK7Q96M32 723 aa26.92■■□□□ 1.9
IPO4-215ENST00000560935 PPP2R1AP30153 589 aa26.91■■□□□ 1.9
IPO4-215ENST00000560935 ATP6V1AP38606 617 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms