RNA–Protein interactions for RNA: ENST00000560726.5

ETFA-216, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3 BASIC

Gene ETFA, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-216ENST00000560726 PSDA5PKW4 1024 aaPredicted RBP25.49■■□□□ 1.67
ETFA-216ENST00000560726 ZCRB1Q8TBF4 217 aaKnown RBP25.48■■□□□ 1.67
ETFA-216ENST00000560726 SHANK3Q9BYB0 1731 aa25.47■■□□□ 1.67
ETFA-216ENST00000560726 PLSCR1O15162 318 aa25.47■■□□□ 1.67
ETFA-216ENST00000560726 RAPGEF4Q8WZA2 1011 aa25.47■■□□□ 1.67
ETFA-216ENST00000560726 NHSQ6T4R5 1651 aa25.46■■□□□ 1.67
ETFA-216ENST00000560726 EYA1Q99502 592 aa25.46■■□□□ 1.67
ETFA-216ENST00000560726 NUP188Q5SRE5 1749 aa25.46■■□□□ 1.67
ETFA-216ENST00000560726 NCAPD2Q15021 1401 aa25.45■■□□□ 1.66
ETFA-216ENST00000560726 KAT6BQ8WYB5 2073 aa25.44■■□□□ 1.66
ETFA-216ENST00000560726 NPC1L1Q9UHC9 1359 aa25.44■■□□□ 1.66
ETFA-216ENST00000560726 TATP17735 454 aaPredicted RBP25.44■■□□□ 1.66
ETFA-216ENST00000560726 EIF4A2Q14240 407 aaKnown RBP25.44■■□□□ 1.66
ETFA-216ENST00000560726 R3HDM1Q15032 1099 aaKnown RBP25.44■■□□□ 1.66
ETFA-216ENST00000560726 RGPD3A6NKT7 1758 aaPredicted RBP25.44■■□□□ 1.66
ETFA-216ENST00000560726 RGPD4Q7Z3J3 1758 aa25.44■■□□□ 1.66
ETFA-216ENST00000560726 PROM2Q8N271 834 aa25.43■■□□□ 1.66
ETFA-216ENST00000560726 DDX10Q13206 875 aaKnown RBP25.4■■□□□ 1.66
ETFA-216ENST00000560726 CC2D1BQ5T0F9 858 aaKnown RBP25.4■■□□□ 1.66
ETFA-216ENST00000560726 BTAF1O14981 1849 aa25.38■■□□□ 1.65
ETFA-216ENST00000560726 DOT1LQ8TEK3 1739 aa25.37■■□□□ 1.65
ETFA-216ENST00000560726 PRIM1P49642 420 aaKnown RBP25.36■■□□□ 1.65
ETFA-216ENST00000560726 TXNRD1Q16881 649 aa25.36■■□□□ 1.65
ETFA-216ENST00000560726 NBPF14Q5TI25 921 aa25.36■■□□□ 1.65
ETFA-216ENST00000560726 CYP27B1O15528 508 aa25.35■■□□□ 1.65
ETFA-216ENST00000560726 CNGB1Q14028 1251 aaPredicted RBP25.35■■□□□ 1.65
ETFA-216ENST00000560726 PCDH11XQ9BZA7 1347 aa25.35■■□□□ 1.65
ETFA-216ENST00000560726 PCDH11YQ9BZA8 1340 aa25.35■■□□□ 1.65
ETFA-216ENST00000560726 PKD1L3Q7Z443 1732 aa25.34■■□□□ 1.65
ETFA-216ENST00000560726 SYTL4Q96C24 671 aaPredicted RBP25.34■■□□□ 1.65
ETFA-216ENST00000560726 ANO8Q9HCE9 1232 aaPredicted RBP25.34■■□□□ 1.65
ETFA-216ENST00000560726 IGSF1Q8N6C5 1336 aa25.34■■□□□ 1.65
ETFA-216ENST00000560726 MTHFSP49914 203 aa25.32■■□□□ 1.64
ETFA-216ENST00000560726 SPG7Q9UQ90 795 aa25.3■■□□□ 1.64
ETFA-216ENST00000560726 IL13P35225 146 aa25.29■■□□□ 1.64
ETFA-216ENST00000560726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.28■■□□□ 1.642e-7■□□□□ 10
ETFA-216ENST00000560726 AEBP1Q8IUX7 1158 aa25.27■■□□□ 1.64
ETFA-216ENST00000560726 LRRC4BQ9NT99 713 aa25.26■■□□□ 1.63
ETFA-216ENST00000560726 NKX1-1Q15270 411 aaPredicted RBP25.25■■□□□ 1.63
ETFA-216ENST00000560726 LRP5O75197 1615 aa25.25■■□□□ 1.63
ETFA-216ENST00000560726 TOGARAM1Q9Y4F4 1720 aa25.25■■□□□ 1.63
ETFA-216ENST00000560726 PHKG2P15735 406 aa25.23■■□□□ 1.63
ETFA-216ENST00000560726 SULT6B1Q6IMI4 303 aa25.23■■□□□ 1.63
ETFA-216ENST00000560726 KCNQ4P56696 695 aa25.22■■□□□ 1.63
ETFA-216ENST00000560726 STK32BQ9NY57 414 aa25.22■■□□□ 1.63
ETFA-216ENST00000560726 PAPPAQ13219 1627 aa25.22■■□□□ 1.63
ETFA-216ENST00000560726 PLEKHG2Q9H7P9 1386 aa25.21■■□□□ 1.63
ETFA-216ENST00000560726 SLC15A2Q16348 729 aa25.21■■□□□ 1.63
ETFA-216ENST00000560726 MPRIPQ6WCQ1 1025 aa25.21■■□□□ 1.63
ETFA-216ENST00000560726 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
ETFA-216ENST00000560726 PDGFDQ9GZP0 370 aaPredicted RBP25.21■■□□□ 1.63
ETFA-216ENST00000560726 SLC27A3Q5K4L6 730 aa25.2■■□□□ 1.62
ETFA-216ENST00000560726 ITGB4P16144 1822 aa25.2■■□□□ 1.62
ETFA-216ENST00000560726 LY75O60449 1722 aa25.2■■□□□ 1.62
ETFA-216ENST00000560726 KDRP35968 1356 aa25.19■■□□□ 1.62
ETFA-216ENST00000560726 PLEKHO1Q53GL0 409 aaPredicted RBP25.18■■□□□ 1.62
ETFA-216ENST00000560726 DIAPH1O60610 1272 aaKnown RBP25.17■■□□□ 1.62
ETFA-216ENST00000560726 ZNF827Q17R98 1081 aa25.17■■□□□ 1.62
ETFA-216ENST00000560726 PIGBQ92521 554 aa25.17■■□□□ 1.62
ETFA-216ENST00000560726 CASZ1Q86V15 1759 aa25.17■■□□□ 1.62
ETFA-216ENST00000560726 COL3A1P02461 1466 aaPredicted RBP25.16■■□□□ 1.62
ETFA-216ENST00000560726 HMOX1P09601 288 aa25.15■■□□□ 1.62
ETFA-216ENST00000560726 AMOTQ4VCS5 1084 aa25.15■■□□□ 1.62
ETFA-216ENST00000560726 ZNF530Q6P9A1 599 aaPredicted RBP25.15■■□□□ 1.62
ETFA-216ENST00000560726 CCNL1Q9UK58 526 aaPredicted RBP25.15■■□□□ 1.62
ETFA-216ENST00000560726 RALBP1Q15311 655 aa25.14■■□□□ 1.62
ETFA-216ENST00000560726 AKT1S1Q96B36 256 aa25.14■■□□□ 1.62
ETFA-216ENST00000560726 PALLDQ8WX93 1383 aa25.13■■□□□ 1.61
ETFA-216ENST00000560726 PPP2R1AP30153 589 aa25.12■■□□□ 1.61
ETFA-216ENST00000560726 PRKRIP1Q9H875 184 aaPredicted RBP25.11■■□□□ 1.61
ETFA-216ENST00000560726 SPON1Q9HCB6 807 aa25.11■■□□□ 1.61
ETFA-216ENST00000560726 TMOD3Q9NYL9 352 aa25.11■■□□□ 1.61
ETFA-216ENST00000560726 ZBTB7AO95365 584 aa25.1■■□□□ 1.61
ETFA-216ENST00000560726 KDM6AO15550 1401 aaPredicted RBP25.1■■□□□ 1.61
ETFA-216ENST00000560726 HSP90AB1P08238 724 aaKnown RBP25.09■■□□□ 1.61
ETFA-216ENST00000560726 DCAF5Q96JK2 942 aa25.09■■□□□ 1.61
ETFA-216ENST00000560726 U2SURPO15042 1029 aaKnown RBP25.08■■□□□ 1.61
ETFA-216ENST00000560726 C1orf141Q5JVX7 400 aa25.08■■□□□ 1.61
ETFA-216ENST00000560726 SMARCC1Q92922 1105 aaPredicted RBP25.08■■□□□ 1.61
ETFA-216ENST00000560726 ASAP1Q9ULH1 1129 aa25.08■■□□□ 1.61
ETFA-216ENST00000560726 ERVV-2B6SEH9 535 aa25.07■■□□□ 1.6
ETFA-216ENST00000560726 ATF5Q9Y2D1 282 aaPredicted RBP25.06■■□□□ 1.6
ETFA-216ENST00000560726 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
ETFA-216ENST00000560726 CFAP53Q96M91 514 aa25.05■■□□□ 1.6
ETFA-216ENST00000560726 ATG3Q9NT62 314 aa25.05■■□□□ 1.6
ETFA-216ENST00000560726 TFCP2L1Q9NZI6 479 aa25.05■■□□□ 1.6
ETFA-216ENST00000560726 PNPLA7Q6ZV29 1317 aa25.04■■□□□ 1.6
ETFA-216ENST00000560726 MYBBP1AQ9BQG0 1328 aaKnown RBP25.04■■□□□ 1.6
ETFA-216ENST00000560726 C5P01031 1676 aa25.04■■□□□ 1.6
ETFA-216ENST00000560726 MTHFSDQ2M296 383 aaKnown RBP25.03■■□□□ 1.6
ETFA-216ENST00000560726 AKAP4Q5JQC9 854 aa25.03■■□□□ 1.6
ETFA-216ENST00000560726 QSER1Q2KHR3 1735 aa25.03■■□□□ 1.6
ETFA-216ENST00000560726 TAF1LQ8IZX4 1826 aa25.02■■□□□ 1.6
ETFA-216ENST00000560726 LOC102724428A0A0B4J2F2 783 aa25.02■■□□□ 1.6
ETFA-216ENST00000560726 PTGER2P43116 358 aa25.02■■□□□ 1.6
ETFA-216ENST00000560726 SIK1P57059 783 aa25.02■■□□□ 1.6
ETFA-216ENST00000560726 CABP4P57796 275 aa25.02■■□□□ 1.6
ETFA-216ENST00000560726 MTFR1LQ9H019 292 aa25.01■■□□□ 1.59
ETFA-216ENST00000560726 NFATC2IPQ8NCF5 419 aa24.99■■□□□ 1.59
ETFA-216ENST00000560726 LGR6Q9HBX8 967 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms