RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 COL18A1P39060 1754 aa9.71□□□□□ -0.86
IDH3A-220ENST00000560667 NEFMP07197 916 aa9.71□□□□□ -0.86
IDH3A-220ENST00000560667 MBIPQ9NS73 344 aa9.71□□□□□ -0.86
IDH3A-220ENST00000560667 DLG5Q8TDM6 1919 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 RTL1A6NKG5 1358 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 NHSL1Q5SYE7 1610 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 PHRF1Q9P1Y6 1649 aaKnown RBP9.7□□□□□ -0.86
IDH3A-220ENST00000560667 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
IDH3A-220ENST00000560667 MPRIPQ6WCQ1 1025 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 C8orf58Q8NAV2 365 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 BTG4Q9NY30 223 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 CRYBG1Q9Y4K1 1723 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
IDH3A-220ENST00000560667 RRP1P56182 461 aaKnown RBP9.69□□□□□ -0.86
IDH3A-220ENST00000560667 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
IDH3A-220ENST00000560667 CPDO75976 1380 aa9.69□□□□□ -0.86
IDH3A-220ENST00000560667 TOM1L2Q6ZVM7 507 aa9.68□□□□□ -0.86
IDH3A-220ENST00000560667 COL16A1Q07092 1604 aaPredicted RBP9.68□□□□□ -0.86
IDH3A-220ENST00000560667 GNAT3A8MTJ3 354 aa9.68□□□□□ -0.86
IDH3A-220ENST00000560667 KCNQ3O43525 872 aa9.68□□□□□ -0.86
IDH3A-220ENST00000560667 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
IDH3A-220ENST00000560667 EVA1CP58658 441 aa9.68□□□□□ -0.86
IDH3A-220ENST00000560667 NCBP3Q53F19 620 aaKnown RBP9.68□□□□□ -0.86
IDH3A-220ENST00000560667 EXOC6Q8TAG9 804 aa9.68□□□□□ -0.86
IDH3A-220ENST00000560667 ZNF772Q68DY9 489 aaPredicted RBP9.67□□□□□ -0.86
IDH3A-220ENST00000560667 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
IDH3A-220ENST00000560667 LRP6O75581 1613 aa9.67□□□□□ -0.86
IDH3A-220ENST00000560667 CHL1O00533 1208 aa9.67□□□□□ -0.86
IDH3A-220ENST00000560667 ZNF530Q6P9A1 599 aaPredicted RBP9.67□□□□□ -0.86
IDH3A-220ENST00000560667 SSH1Q8WYL5 1049 aa9.67□□□□□ -0.86
IDH3A-220ENST00000560667 MYH16Q9H6N6 1097 aa9.67□□□□□ -0.86
IDH3A-220ENST00000560667 CRB1P82279 1406 aa9.66□□□□□ -0.86
IDH3A-220ENST00000560667 CYP27B1O15528 508 aa9.66□□□□□ -0.86
IDH3A-220ENST00000560667 VAMP4O75379 141 aa9.66□□□□□ -0.86
IDH3A-220ENST00000560667 FRAT1Q92837 279 aaPredicted RBP9.66□□□□□ -0.86
IDH3A-220ENST00000560667 MEGF6O75095 1541 aa9.66□□□□□ -0.86
IDH3A-220ENST00000560667 NEFLP07196 543 aa9.65□□□□□ -0.86
IDH3A-220ENST00000560667 GAS2L2Q8NHY3 880 aa9.65□□□□□ -0.86
IDH3A-220ENST00000560667 RTF1Q92541 710 aaKnown RBP9.65□□□□□ -0.86
IDH3A-220ENST00000560667 IFT57Q9NWB7 429 aa9.65□□□□□ -0.86
IDH3A-220ENST00000560667 WDR17Q8IZU2 1322 aa9.65□□□□□ -0.86
IDH3A-220ENST00000560667 AHDC1Q5TGY3 1603 aaPredicted RBP9.65□□□□□ -0.86
IDH3A-220ENST00000560667 PLEKHO1Q53GL0 409 aaPredicted RBP9.65□□□□□ -0.86
IDH3A-220ENST00000560667 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
IDH3A-220ENST00000560667 RAPGEF4Q8WZA2 1011 aa9.65□□□□□ -0.86
IDH3A-220ENST00000560667 IL16Q14005 1332 aa9.65□□□□□ -0.87
IDH3A-220ENST00000560667 RLBP1P12271 317 aa9.64□□□□□ -0.87
IDH3A-220ENST00000560667 GNAI1P63096 354 aa9.64□□□□□ -0.87
IDH3A-220ENST00000560667 PANK1Q8TE04 598 aa9.64□□□□□ -0.87
IDH3A-220ENST00000560667 CLUAP1Q96AJ1 413 aa9.64□□□□□ -0.87
IDH3A-220ENST00000560667 CRBNQ96SW2 442 aa9.64□□□□□ -0.87
IDH3A-220ENST00000560667 COL5A2P05997 1499 aaPredicted RBP9.64□□□□□ -0.87
IDH3A-220ENST00000560667 NCAPD2Q15021 1401 aa9.64□□□□□ -0.87
IDH3A-220ENST00000560667 DDX54Q8TDD1 881 aaKnown RBP9.64□□□□□ -0.87
IDH3A-220ENST00000560667 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
IDH3A-220ENST00000560667 ABCA3Q99758 1704 aa9.63□□□□□ -0.87
IDH3A-220ENST00000560667 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
IDH3A-220ENST00000560667 PRAMEF22A3QJZ6 481 aa9.63□□□□□ -0.87
IDH3A-220ENST00000560667 RNMTO43148 476 aaKnown RBP9.63□□□□□ -0.87
IDH3A-220ENST00000560667 TATP17735 454 aaPredicted RBP9.63□□□□□ -0.87
IDH3A-220ENST00000560667 RXRBP28702 533 aa9.63□□□□□ -0.87
IDH3A-220ENST00000560667 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
IDH3A-220ENST00000560667 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
IDH3A-220ENST00000560667 PHKG2P15735 406 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 LMOD3Q0VAK6 560 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 SLC39A6Q13433 755 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 TWISTNBQ3B726 338 aaPredicted RBP9.62□□□□□ -0.87
IDH3A-220ENST00000560667 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 TSPYL4Q9UJ04 414 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 NOB1Q9ULX3 412 aaKnown RBP9.62□□□□□ -0.87
IDH3A-220ENST00000560667 LMO7Q8WWI1 1683 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 EP400Q96L91 3159 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 FAM208AQ9UK61 1670 aaKnown RBP9.62□□□□□ -0.87
IDH3A-220ENST00000560667 TAF7Q15545 349 aaPredicted RBP9.62□□□□□ -0.87
IDH3A-220ENST00000560667 AMOTQ4VCS5 1084 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 C8orf37Q96NL8 207 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 SRCAPQ6ZRS2 3230 aa9.62□□□□□ -0.87
IDH3A-220ENST00000560667 AFF2P51816 1311 aa9.61□□□□□ -0.87
IDH3A-220ENST00000560667 UPF1Q92900 1129 aaKnown RBP eCLIP9.61□□□□□ -0.87
IDH3A-220ENST00000560667 HTATSF1O43719 755 aaKnown RBP9.61□□□□□ -0.87
IDH3A-220ENST00000560667 C1orf141Q5JVX7 400 aa9.61□□□□□ -0.87
IDH3A-220ENST00000560667 SMC4Q9NTJ3 1288 aa9.61□□□□□ -0.87
IDH3A-220ENST00000560667 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
IDH3A-220ENST00000560667 CEMIPQ8WUJ3 1361 aa9.6□□□□□ -0.87
IDH3A-220ENST00000560667 IL2RBP14784 551 aa9.6□□□□□ -0.87
IDH3A-220ENST00000560667 G2E3Q7L622 706 aa9.6□□□□□ -0.87
IDH3A-220ENST00000560667 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
IDH3A-220ENST00000560667 NGLY1Q96IV0 654 aa9.6□□□□□ -0.87
IDH3A-220ENST00000560667 BTBD11A6QL63 1104 aa9.59□□□□□ -0.87
IDH3A-220ENST00000560667 SKAP1Q86WV1 359 aa9.59□□□□□ -0.87
IDH3A-220ENST00000560667 MRPL50Q8N5N7 158 aaKnown RBP9.59□□□□□ -0.87
IDH3A-220ENST00000560667 KDM6AO15550 1401 aaPredicted RBP9.59□□□□□ -0.87
IDH3A-220ENST00000560667 CALD1Q05682 793 aaKnown RBP9.59□□□□□ -0.87
IDH3A-220ENST00000560667 IFNL2Q8IZJ0 200 aa9.59□□□□□ -0.87
IDH3A-220ENST00000560667 SPG7Q9UQ90 795 aa9.59□□□□□ -0.87
IDH3A-220ENST00000560667 ANXA1P04083 346 aa9.58□□□□□ -0.88
IDH3A-220ENST00000560667 TRIM27P14373 513 aa9.58□□□□□ -0.88
IDH3A-220ENST00000560667 TEFQ10587 303 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms