RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 CIZ1Q9ULV3 898 aaPredicted RBP8.27□□□□□ -1.09
AP4E1-203ENST00000560508 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
AP4E1-203ENST00000560508 PRPF40AO75400 957 aaKnown RBP8.26□□□□□ -1.09
AP4E1-203ENST00000560508 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
AP4E1-203ENST00000560508 TAF7Q15545 349 aaPredicted RBP8.26□□□□□ -1.09
AP4E1-203ENST00000560508 CCDC57Q2TAC2 916 aa8.26□□□□□ -1.09
AP4E1-203ENST00000560508 MCM10Q7L590 875 aa8.26□□□□□ -1.09
AP4E1-203ENST00000560508 TRAPPC8Q9Y2L5 1435 aa8.26□□□□□ -1.09
AP4E1-203ENST00000560508 ZSCAN31Q96LW9 406 aaPredicted RBP8.26□□□□□ -1.09
AP4E1-203ENST00000560508 SHROOM2Q13796 1616 aa8.26□□□□□ -1.09
AP4E1-203ENST00000560508 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.26□□□□□ -1.09
AP4E1-203ENST00000560508 FBXO31Q5XUX0 539 aaPredicted RBP8.26□□□□□ -1.09
AP4E1-203ENST00000560508 KIF1BO60333 1816 aa8.26□□□□□ -1.09
AP4E1-203ENST00000560508 DDX54Q8TDD1 881 aaKnown RBP8.26□□□□□ -1.09
AP4E1-203ENST00000560508 PLXNC1O60486 1568 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 HOMER1Q86YM7 354 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 FAM43AQ8N2R8 423 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 SSH1Q8WYL5 1049 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 PPIP5K1Q6PFW1 1433 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 PARD3Q8TEW0 1356 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 AMOTL2Q9Y2J4 779 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 RIMS2Q9UQ26 1411 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 PLEKHH1Q9ULM0 1364 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 CCAR2Q8N163 923 aaKnown RBP8.25□□□□□ -1.09
AP4E1-203ENST00000560508 KINO60870 393 aaKnown RBP8.25□□□□□ -1.09
AP4E1-203ENST00000560508 UHRF1BP1Q6BDS2 1440 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 KIF1BPQ96EK5 621 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 KRT32Q14532 448 aa8.25□□□□□ -1.09
AP4E1-203ENST00000560508 PDIA4P13667 645 aaKnown RBP8.24□□□□□ -1.09
AP4E1-203ENST00000560508 COL17A1Q9UMD9 1497 aaPredicted RBP8.24□□□□□ -1.09
AP4E1-203ENST00000560508 C20orf194Q5TEA3 1177 aa8.24□□□□□ -1.09
AP4E1-203ENST00000560508 NACAP1Q9BZK3 213 aa8.24□□□□□ -1.09
AP4E1-203ENST00000560508 ZFYVE9O95405 1425 aa8.24□□□□□ -1.09
AP4E1-203ENST00000560508 CCDC69A6NI79 296 aa8.24□□□□□ -1.09
AP4E1-203ENST00000560508 UHRF1BP1LA0JNW5 1464 aa8.24□□□□□ -1.09
AP4E1-203ENST00000560508 FAM177BA6PVY3 158 aa8.24□□□□□ -1.09
AP4E1-203ENST00000560508 MIS18AQ9NYP9 233 aa8.24□□□□□ -1.09
AP4E1-203ENST00000560508 EMILIN1Q9Y6C2 1016 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 SDF4Q9BRK5 362 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 CTNNA3Q9UI47 895 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 PIK3C2GO75747 1445 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 CCP110O43303 1012 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 DCTN1Q14203 1278 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 LARP1Q6PKG0 1096 aaKnown RBP8.23□□□□□ -1.09
AP4E1-203ENST00000560508 CWC27Q6UX04 472 aaKnown RBP8.23□□□□□ -1.09
AP4E1-203ENST00000560508 THUMPD2Q9BTF0 503 aaKnown RBP8.23□□□□□ -1.09
AP4E1-203ENST00000560508 PRDM11Q9NQV5 511 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 TTC21AQ8NDW8 1320 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 MX1P20591 662 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 XPCQ01831 940 aaPredicted RBP8.23□□□□□ -1.09
AP4E1-203ENST00000560508 BLOC1S2Q6QNY1 142 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 PHF8Q9UPP1 1060 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 TXLNAP40222 546 aa8.23□□□□□ -1.09
AP4E1-203ENST00000560508 DHX8Q14562 1220 aaKnown RBP8.23□□□□□ -1.09
AP4E1-203ENST00000560508 CDKL5O76039 1030 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 STARD3NLO95772 234 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 STK3Q13188 491 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 RRP12Q5JTH9 1297 aaKnown RBP8.22□□□□□ -1.09
AP4E1-203ENST00000560508 JMYQ8N9B5 988 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 HYPKQ9NX55 129 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 JAKMIP1Q96N16 626 aaKnown RBP8.22□□□□□ -1.09
AP4E1-203ENST00000560508 ZMYM4Q5VZL5 1548 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 AEBP2Q6ZN18 517 aaPredicted RBP8.22□□□□□ -1.09
AP4E1-203ENST00000560508 CCDC43Q96MW1 224 aaKnown RBP8.22□□□□□ -1.09
AP4E1-203ENST00000560508 MPHOSPH8Q99549 860 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 CHD1O14646 1710 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 KRT85P78386 507 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 STK38Q15208 465 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 NUTM1Q86Y26 1132 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 AKAP2Q9Y2D5 859 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 PREX2Q70Z35 1606 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 FIBPO43427 364 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 CCDC192P0DO97 292 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 DACH1Q9UI36 760 aa8.22□□□□□ -1.09
AP4E1-203ENST00000560508 POLR3AO14802 1390 aaPredicted RBP8.21□□□□□ -1.09
AP4E1-203ENST00000560508 KDM4AO75164 1064 aa8.21□□□□□ -1.09
AP4E1-203ENST00000560508 GLRX3O76003 335 aaKnown RBP8.21□□□□□ -1.09
AP4E1-203ENST00000560508 HMGB2P26583 209 aaKnown RBP8.21□□□□□ -1.09
AP4E1-203ENST00000560508 EPS15P42566 896 aa8.21□□□□□ -1.09
AP4E1-203ENST00000560508 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.09
AP4E1-203ENST00000560508 PIK3R4Q99570 1358 aa8.21□□□□□ -1.09
AP4E1-203ENST00000560508 TRIM27P14373 513 aa8.21□□□□□ -1.09
AP4E1-203ENST00000560508 FKBP4Q02790 459 aaKnown RBP eCLIP8.21□□□□□ -1.09
AP4E1-203ENST00000560508 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.09
AP4E1-203ENST00000560508 TNMDQ9H2S6 317 aa8.21□□□□□ -1.09
AP4E1-203ENST00000560508 IL1RAPL2Q9NP60 686 aa8.21□□□□□ -1.09
AP4E1-203ENST00000560508 ZC3H6P61129 1189 aaKnown RBP8.21□□□□□ -1.1
AP4E1-203ENST00000560508 TEX35Q5T0J7 233 aa8.21□□□□□ -1.1
AP4E1-203ENST00000560508 TRIM5Q9C035 493 aa8.21□□□□□ -1.1
AP4E1-203ENST00000560508 SMARCA5O60264 1052 aaPredicted RBP8.21□□□□□ -1.1
AP4E1-203ENST00000560508 SMC2O95347 1197 aa8.21□□□□□ -1.1
AP4E1-203ENST00000560508 FILIP1LQ4L180 1135 aa8.21□□□□□ -1.1
AP4E1-203ENST00000560508 LARP1BQ659C4 914 aaKnown RBP8.21□□□□□ -1.1
AP4E1-203ENST00000560508 USHBP1Q8N6Y0 703 aa8.21□□□□□ -1.1
AP4E1-203ENST00000560508 MYD88Q99836 296 aa8.21□□□□□ -1.1
AP4E1-203ENST00000560508 ARGLU1Q9NWB6 273 aaPredicted RBP8.21□□□□□ -1.1
AP4E1-203ENST00000560508 ACEP12821 1306 aa8.21□□□□□ -1.1
AP4E1-203ENST00000560508 CASTP20810 708 aaKnown RBP8.21□□□□□ -1.1
AP4E1-203ENST00000560508 PDILTQ8N807 584 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms