RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 WBP1LQ9NX94 342 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 SSUH2Q9Y2M2 353 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 NHSQ6T4R5 1651 aa10.01□□□□□ -0.81
HERC1-208ENST00000560462 C9orf131Q5VYM1 1079 aa10□□□□□ -0.81
HERC1-208ENST00000560462 ARHGAP27Q6ZUM4 889 aa10□□□□□ -0.81
HERC1-208ENST00000560462 TNRC6CQ9HCJ0 1690 aaKnown RBP9.99□□□□□ -0.81
HERC1-208ENST00000560462 USP6P35125 1406 aa9.99□□□□□ -0.81
HERC1-208ENST00000560462 TUBGCP6Q96RT7 1819 aa9.99□□□□□ -0.81
HERC1-208ENST00000560462 NUTM2GQ5VZR2 741 aa9.99□□□□□ -0.81
HERC1-208ENST00000560462 TOM1L2Q6ZVM7 507 aa9.99□□□□□ -0.81
HERC1-208ENST00000560462 COL23A1Q86Y22 540 aaPredicted RBP9.99□□□□□ -0.81
HERC1-208ENST00000560462 TSHZ2Q9NRE2 1034 aa9.99□□□□□ -0.81
HERC1-208ENST00000560462 ZBTB47Q9UFB7 747 aaPredicted RBP9.99□□□□□ -0.81
HERC1-208ENST00000560462 CNTNAP1P78357 1384 aa9.99□□□□□ -0.81
HERC1-208ENST00000560462 EXOC5O00471 708 aa9.98□□□□□ -0.81
HERC1-208ENST00000560462 DSG3P32926 999 aa9.98□□□□□ -0.81
HERC1-208ENST00000560462 MIER1Q8N108 512 aa9.98□□□□□ -0.81
HERC1-208ENST00000560462 NGDNQ8NEJ9 315 aaKnown RBP9.98□□□□□ -0.81
HERC1-208ENST00000560462 GCC1Q96CN9 775 aa9.98□□□□□ -0.81
HERC1-208ENST00000560462 RPGRIP1LQ68CZ1 1315 aa9.98□□□□□ -0.81
HERC1-208ENST00000560462 KNDC1Q76NI1 1749 aa9.98□□□□□ -0.81
HERC1-208ENST00000560462 NUP155O75694 1391 aa9.98□□□□□ -0.81
HERC1-208ENST00000560462 TRPM1Q7Z4N2 1603 aa9.96□□□□□ -0.81
HERC1-208ENST00000560462 ABCB7O75027 752 aa9.96□□□□□ -0.82
HERC1-208ENST00000560462 KCNQ4P56696 695 aa9.96□□□□□ -0.82
HERC1-208ENST00000560462 TMEM132EQ6IEE7 984 aa9.96□□□□□ -0.82
HERC1-208ENST00000560462 BCS1LQ9Y276 419 aa9.96□□□□□ -0.82
HERC1-208ENST00000560462 BTAF1O14981 1849 aa9.96□□□□□ -0.82
HERC1-208ENST00000560462 SIRT1Q96EB6 747 aa9.95□□□□□ -0.82
HERC1-208ENST00000560462 VEGFAP15692 232 aaPredicted RBP9.94□□□□□ -0.82
HERC1-208ENST00000560462 VEGFBP49765 207 aa9.94□□□□□ -0.82
HERC1-208ENST00000560462 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
HERC1-208ENST00000560462 KANK4Q5T7N3 995 aaPredicted RBP9.94□□□□□ -0.82
HERC1-208ENST00000560462 KIF1BO60333 1816 aa9.93□□□□□ -0.82
HERC1-208ENST00000560462 WNK3Q9BYP7 1800 aa9.93□□□□□ -0.82
HERC1-208ENST00000560462 YTHDC2Q9H6S0 1430 aaKnown RBP9.93□□□□□ -0.82
HERC1-208ENST00000560462 PKD1L3Q7Z443 1732 aa9.93□□□□□ -0.82
HERC1-208ENST00000560462 PIK3C2AO00443 1686 aa9.93□□□□□ -0.82
HERC1-208ENST00000560462 MAP2K1Q02750 393 aaPredicted RBP9.92□□□□□ -0.82
HERC1-208ENST00000560462 HABP4Q5JVS0 413 aaKnown RBP9.92□□□□□ -0.82
HERC1-208ENST00000560462 MCOLN1Q9GZU1 580 aa9.92□□□□□ -0.82
HERC1-208ENST00000560462 RNF181Q9P0P0 153 aa9.92□□□□□ -0.82
HERC1-208ENST00000560462 A0A0C4DFX4 3053 aa9.91□□□□□ -0.82
HERC1-208ENST00000560462 EIF3AQ14152 1382 aaKnown RBP9.91□□□□□ -0.82
HERC1-208ENST00000560462 WDR17Q8IZU2 1322 aa9.91□□□□□ -0.82
HERC1-208ENST00000560462 ZBTB7CA1YPR0 619 aa9.91□□□□□ -0.82
HERC1-208ENST00000560462 GCP02774 474 aa9.91□□□□□ -0.82
HERC1-208ENST00000560462 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
HERC1-208ENST00000560462 PITPNM2Q9BZ72 1349 aa9.9□□□□□ -0.82
HERC1-208ENST00000560462 PRR36Q9H6K5 1346 aa9.9□□□□□ -0.82
HERC1-208ENST00000560462 NBR1Q14596 966 aa9.9□□□□□ -0.82
HERC1-208ENST00000560462 HS6ST3Q8IZP7 471 aa9.9□□□□□ -0.82
HERC1-208ENST00000560462 PRAM1Q96QH2 718 aa9.9□□□□□ -0.82
HERC1-208ENST00000560462 PPLO60437 1756 aa9.9□□□□□ -0.82
HERC1-208ENST00000560462 ADGRF5Q8IZF2 1346 aa9.89□□□□□ -0.83
HERC1-208ENST00000560462 FCHSD2O94868 740 aa9.89□□□□□ -0.83
HERC1-208ENST00000560462 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
HERC1-208ENST00000560462 VPS8Q8N3P4 1428 aa9.89□□□□□ -0.83
HERC1-208ENST00000560462 SOX10P56693 466 aa9.88□□□□□ -0.83
HERC1-208ENST00000560462 ABTB2Q8N961 1025 aa9.88□□□□□ -0.83
HERC1-208ENST00000560462 CARD10Q9BWT7 1032 aa9.88□□□□□ -0.83
HERC1-208ENST00000560462 CUL9Q8IWT3 2517 aa9.88□□□□□ -0.83
HERC1-208ENST00000560462 ABCC6O95255 1503 aa9.87□□□□□ -0.83
HERC1-208ENST00000560462 SLC17A8Q8NDX2 589 aa9.87□□□□□ -0.83
HERC1-208ENST00000560462 BEGAINQ9BUH8 593 aa9.87□□□□□ -0.83
HERC1-208ENST00000560462 CCNL1Q9UK58 526 aaPredicted RBP9.87□□□□□ -0.83
HERC1-208ENST00000560462 COL18A1P39060 1754 aa9.87□□□□□ -0.83
HERC1-208ENST00000560462 A0A0G2JLW4 131 aa9.86□□□□□ -0.83
HERC1-208ENST00000560462 TGFB2P61812 414 aa9.86□□□□□ -0.83
HERC1-208ENST00000560462 POGKQ9P215 609 aa9.86□□□□□ -0.83
HERC1-208ENST00000560462 VIRMAQ69YN4 1812 aaKnown RBP9.86□□□□□ -0.83
HERC1-208ENST00000560462 ZC3H4Q9UPT8 1303 aaKnown RBP9.85□□□□□ -0.83
HERC1-208ENST00000560462 GLTPD2A6NH11 291 aa9.85□□□□□ -0.83
HERC1-208ENST00000560462 CSB-PGBD3P0DP91 1061 aa9.85□□□□□ -0.83
HERC1-208ENST00000560462 CHADLQ6NUI6 762 aa9.85□□□□□ -0.83
HERC1-208ENST00000560462 NLRP13Q86W25 1043 aa9.85□□□□□ -0.83
HERC1-208ENST00000560462 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
HERC1-208ENST00000560462 SPATA31E1Q6ZUB1 1445 aa9.84□□□□□ -0.83
HERC1-208ENST00000560462 FXR1P51114 621 aaKnown RBP eCLIP9.84□□□□□ -0.83
HERC1-208ENST00000560462 DGKZQ13574 1117 aa9.84□□□□□ -0.83
HERC1-208ENST00000560462 NBPF15Q8N660 670 aa9.84□□□□□ -0.83
HERC1-208ENST00000560462 TMEM88BA6NKF7 163 aa9.83□□□□□ -0.84
HERC1-208ENST00000560462 AXIN2Q9Y2T1 843 aa9.83□□□□□ -0.84
HERC1-208ENST00000560462 CCDC7Q96M83 1385 aa9.83□□□□□ -0.84
HERC1-208ENST00000560462 WDR33Q9C0J8 1336 aaKnown RBP9.82□□□□□ -0.84
HERC1-208ENST00000560462 SYTL4Q96C24 671 aaPredicted RBP9.82□□□□□ -0.84
HERC1-208ENST00000560462 QRICH2Q9H0J4 1663 aa9.81□□□□□ -0.84
HERC1-208ENST00000560462 WASLO00401 505 aaPredicted RBP9.81□□□□□ -0.84
HERC1-208ENST00000560462 DEFB115Q30KQ5 88 aa9.81□□□□□ -0.84
HERC1-208ENST00000560462 SMIM5Q71RC9 77 aa9.81□□□□□ -0.84
HERC1-208ENST00000560462 KIAA1551Q9HCM1 1747 aa9.81□□□□□ -0.84
HERC1-208ENST00000560462 PIK3C2GO75747 1445 aa9.81□□□□□ -0.84
HERC1-208ENST00000560462 MINK1Q8N4C8 1332 aaPredicted RBP9.81□□□□□ -0.84
HERC1-208ENST00000560462 PASKQ96RG2 1323 aa9.81□□□□□ -0.84
HERC1-208ENST00000560462 N4BP2Q86UW6 1770 aaPredicted RBP9.8□□□□□ -0.84
HERC1-208ENST00000560462 LY75O60449 1722 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 RASSF10A6NK89 507 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 POTECB2RU33 542 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 DPEP1P16444 411 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 FAM50AQ14320 339 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms