RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 PEAK1Q9H792 1746 aa20.34■□□□□ 0.85
IDH3A-219ENST00000560414 C11orf95C9JLR9 678 aaPredicted RBP20.34■□□□□ 0.85
IDH3A-219ENST00000560414 IL2RBP14784 551 aa20.34■□□□□ 0.85
IDH3A-219ENST00000560414 PSDA5PKW4 1024 aaPredicted RBP20.33■□□□□ 0.85
IDH3A-219ENST00000560414 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.85
IDH3A-219ENST00000560414 PTF1AQ7RTS3 328 aa20.33■□□□□ 0.85
IDH3A-219ENST00000560414 KIF20BQ96Q89 1820 aa20.32■□□□□ 0.84
IDH3A-219ENST00000560414 REM2Q8IYK8 340 aaPredicted RBP20.32■□□□□ 0.84
IDH3A-219ENST00000560414 TNS2Q63HR2 1409 aa20.3■□□□□ 0.84
IDH3A-219ENST00000560414 SPDYE1Q8NFV5 336 aaPredicted RBP20.3■□□□□ 0.84
IDH3A-219ENST00000560414 PANK3Q9H999 370 aa20.3■□□□□ 0.84
IDH3A-219ENST00000560414 RTL1A6NKG5 1358 aa20.3■□□□□ 0.84
IDH3A-219ENST00000560414 CGNL1Q0VF96 1302 aa20.29■□□□□ 0.84
IDH3A-219ENST00000560414 HSP90AB2PQ58FF8 381 aa20.29■□□□□ 0.84
IDH3A-219ENST00000560414 SBF2Q86WG5 1849 aa20.28■□□□□ 0.84
IDH3A-219ENST00000560414 BCL11BQ9C0K0 894 aaPredicted RBP20.28■□□□□ 0.84
IDH3A-219ENST00000560414 EMILIN1Q9Y6C2 1016 aa20.28■□□□□ 0.84
IDH3A-219ENST00000560414 BCL9O00512 1426 aa20.27■□□□□ 0.84
IDH3A-219ENST00000560414 PARD3Q8TEW0 1356 aa20.27■□□□□ 0.84
IDH3A-219ENST00000560414 R3HDM1Q15032 1099 aaKnown RBP20.27■□□□□ 0.84
IDH3A-219ENST00000560414 NBPF6Q5VWK0 638 aa20.27■□□□□ 0.84
IDH3A-219ENST00000560414 NBPF4Q96M43 638 aa20.27■□□□□ 0.84
IDH3A-219ENST00000560414 KCNQ2O43526 872 aa20.26■□□□□ 0.83
IDH3A-219ENST00000560414 USHBP1Q8N6Y0 703 aa20.26■□□□□ 0.83
IDH3A-219ENST00000560414 RGPD2P0DJD1 1756 aa20.26■□□□□ 0.83
IDH3A-219ENST00000560414 PPM1GO15355 546 aaPredicted RBP20.25■□□□□ 0.83
IDH3A-219ENST00000560414 ACSBG1Q96GR2 724 aa20.25■□□□□ 0.83
IDH3A-219ENST00000560414 RTN4Q9NQC3 1192 aaKnown RBP20.25■□□□□ 0.83
IDH3A-219ENST00000560414 FAM208AQ9UK61 1670 aaKnown RBP20.25■□□□□ 0.83
IDH3A-219ENST00000560414 INSRP06213 1382 aa20.24■□□□□ 0.83
IDH3A-219ENST00000560414 FLT4P35916 1363 aa20.24■□□□□ 0.83
IDH3A-219ENST00000560414 TNNT2P45379 298 aaPredicted RBP20.24■□□□□ 0.83
IDH3A-219ENST00000560414 DDX54Q8TDD1 881 aaKnown RBP20.24■□□□□ 0.83
IDH3A-219ENST00000560414 PLSCR1O15162 318 aa20.23■□□□□ 0.83
IDH3A-219ENST00000560414 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
IDH3A-219ENST00000560414 IFNLR1Q8IU57 520 aaPredicted RBP20.22■□□□□ 0.83
IDH3A-219ENST00000560414 CLEC11AQ9Y240 323 aa20.22■□□□□ 0.83
IDH3A-219ENST00000560414 KIF24Q5T7B8 1368 aa20.21■□□□□ 0.83
IDH3A-219ENST00000560414 POLKQ9UBT6 870 aa20.21■□□□□ 0.83
IDH3A-219ENST00000560414 RREB1Q92766 1687 aa20.21■□□□□ 0.83
IDH3A-219ENST00000560414 MEGF6O75095 1541 aa20.21■□□□□ 0.83
IDH3A-219ENST00000560414 KIF7Q2M1P5 1343 aa20.21■□□□□ 0.83
IDH3A-219ENST00000560414 MIER1Q8N108 512 aa20.2■□□□□ 0.82
IDH3A-219ENST00000560414 PLCD3Q8N3E9 789 aa20.2■□□□□ 0.82
IDH3A-219ENST00000560414 NUP188Q5SRE5 1749 aa20.19■□□□□ 0.82
IDH3A-219ENST00000560414 NBPF14Q5TI25 921 aa20.19■□□□□ 0.82
IDH3A-219ENST00000560414 ZCRB1Q8TBF4 217 aaKnown RBP20.19■□□□□ 0.82
IDH3A-219ENST00000560414 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
IDH3A-219ENST00000560414 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
IDH3A-219ENST00000560414 MAP2P11137 1827 aaKnown RBP20.17■□□□□ 0.82
IDH3A-219ENST00000560414 WASHC2AQ641Q2 1341 aa20.17■□□□□ 0.82
IDH3A-219ENST00000560414 TATP17735 454 aaPredicted RBP20.15■□□□□ 0.82
IDH3A-219ENST00000560414 TXNRD1Q16881 649 aa20.15■□□□□ 0.82
IDH3A-219ENST00000560414 KNSTRNQ9Y448 316 aa20.15■□□□□ 0.82
IDH3A-219ENST00000560414 NHSQ6T4R5 1651 aa20.15■□□□□ 0.82
IDH3A-219ENST00000560414 ANKRD26Q9UPS8 1709 aa20.14■□□□□ 0.81
IDH3A-219ENST00000560414 ANO8Q9HCE9 1232 aaPredicted RBP20.14■□□□□ 0.81
IDH3A-219ENST00000560414 RGPD3A6NKT7 1758 aaPredicted RBP20.13■□□□□ 0.81
IDH3A-219ENST00000560414 RGPD4Q7Z3J3 1758 aa20.13■□□□□ 0.81
IDH3A-219ENST00000560414 NSD2O96028 1365 aa20.13■□□□□ 0.81
IDH3A-219ENST00000560414 MORC1Q86VD1 984 aa20.13■□□□□ 0.81
IDH3A-219ENST00000560414 EYA1Q99502 592 aa20.13■□□□□ 0.81
IDH3A-219ENST00000560414 PRIM1P49642 420 aaKnown RBP20.12■□□□□ 0.81
IDH3A-219ENST00000560414 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
IDH3A-219ENST00000560414 SHANK3Q9BYB0 1731 aa20.12■□□□□ 0.81
IDH3A-219ENST00000560414 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
IDH3A-219ENST00000560414 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
IDH3A-219ENST00000560414 BTAF1O14981 1849 aa20.09■□□□□ 0.81
IDH3A-219ENST00000560414 PITPNM1O00562 1244 aa20.09■□□□□ 0.81
IDH3A-219ENST00000560414 PRR29P0C7W0 189 aa20.08■□□□□ 0.81
IDH3A-219ENST00000560414 LRP5O75197 1615 aa20.08■□□□□ 0.8
IDH3A-219ENST00000560414 NCAPD2Q15021 1401 aa20.08■□□□□ 0.8
IDH3A-219ENST00000560414 PCDH11XQ9BZA7 1347 aa20.07■□□□□ 0.8
IDH3A-219ENST00000560414 PCDH11YQ9BZA8 1340 aa20.07■□□□□ 0.8
IDH3A-219ENST00000560414 CYP27B1O15528 508 aa20.07■□□□□ 0.8
IDH3A-219ENST00000560414 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
IDH3A-219ENST00000560414 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
IDH3A-219ENST00000560414 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
IDH3A-219ENST00000560414 DOT1LQ8TEK3 1739 aa20.05■□□□□ 0.8
IDH3A-219ENST00000560414 STK32BQ9NY57 414 aa20.05■□□□□ 0.8
IDH3A-219ENST00000560414 SLC15A2Q16348 729 aa20.04■□□□□ 0.8
IDH3A-219ENST00000560414 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
IDH3A-219ENST00000560414 KCNQ4P56696 695 aa20.03■□□□□ 0.8
IDH3A-219ENST00000560414 CNGB1Q14028 1251 aaPredicted RBP20.03■□□□□ 0.8
IDH3A-219ENST00000560414 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
IDH3A-219ENST00000560414 IGSF1Q8N6C5 1336 aa20.02■□□□□ 0.79
IDH3A-219ENST00000560414 PKD1L3Q7Z443 1732 aa20■□□□□ 0.79
IDH3A-219ENST00000560414 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
IDH3A-219ENST00000560414 SPON1Q9HCB6 807 aa20■□□□□ 0.79
IDH3A-219ENST00000560414 MTHFSP49914 203 aa19.99■□□□□ 0.79
IDH3A-219ENST00000560414 ZNF827Q17R98 1081 aa19.99■□□□□ 0.79
IDH3A-219ENST00000560414 SLC27A3Q5K4L6 730 aa19.99■□□□□ 0.79
IDH3A-219ENST00000560414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.79
IDH3A-219ENST00000560414 ZBTB7AO95365 584 aa19.98■□□□□ 0.79
IDH3A-219ENST00000560414 AEBP1Q8IUX7 1158 aa19.98■□□□□ 0.79
IDH3A-219ENST00000560414 IL13P35225 146 aa19.97■□□□□ 0.79
IDH3A-219ENST00000560414 NKX1-1Q15270 411 aaPredicted RBP19.97■□□□□ 0.79
IDH3A-219ENST00000560414 PAPPAQ13219 1627 aa19.97■□□□□ 0.79
IDH3A-219ENST00000560414 CASZ1Q86V15 1759 aa19.96■□□□□ 0.79
IDH3A-219ENST00000560414 PHKG2P15735 406 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms