RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 COL13A1Q5TAT6 717 aaPredicted RBP15.03■□□□□ -0
APH1B-208ENST00000560353 SOX12O15370 315 aa15.02■□□□□ -0
APH1B-208ENST00000560353 NLRP2Q9NX02 1062 aa15.02■□□□□ -0
APH1B-208ENST00000560353 PRELPP51888 382 aa15.01□□□□□ -0.01
APH1B-208ENST00000560353 TOMM70O94826 608 aa15□□□□□ -0.01
APH1B-208ENST00000560353 KCNQ4P56696 695 aa15□□□□□ -0.01
APH1B-208ENST00000560353 COL23A1Q86Y22 540 aaPredicted RBP14.99□□□□□ -0.01
APH1B-208ENST00000560353 TNS4Q8IZW8 715 aa14.99□□□□□ -0.01
APH1B-208ENST00000560353 PIK3C2AO00443 1686 aa14.99□□□□□ -0.01
APH1B-208ENST00000560353 TTC21BQ7Z4L5 1316 aa14.98□□□□□ -0.01
APH1B-208ENST00000560353 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
APH1B-208ENST00000560353 RGPD5Q99666 1765 aa14.98□□□□□ -0.01
APH1B-208ENST00000560353 CENPJQ9HC77 1338 aaPredicted RBP14.97□□□□□ -0.01
APH1B-208ENST00000560353 MSL1Q68DK7 614 aa14.97□□□□□ -0.01
APH1B-208ENST00000560353 ERBB3P21860 1342 aa14.96□□□□□ -0.01
APH1B-208ENST00000560353 TTC21AQ8NDW8 1320 aa14.96□□□□□ -0.01
APH1B-208ENST00000560353 DDX54Q8TDD1 881 aaKnown RBP14.96□□□□□ -0.01
APH1B-208ENST00000560353 SYTL4Q96C24 671 aaPredicted RBP14.96□□□□□ -0.01
APH1B-208ENST00000560353 CCNL1Q9UK58 526 aaPredicted RBP14.96□□□□□ -0.01
APH1B-208ENST00000560353 PRIM1P49642 420 aaKnown RBP14.95□□□□□ -0.02
APH1B-208ENST00000560353 JMYQ8N9B5 988 aa14.95□□□□□ -0.02
APH1B-208ENST00000560353 KLRG1Q96E93 195 aa14.95□□□□□ -0.02
APH1B-208ENST00000560353 NFAT5O94916 1531 aa14.94□□□□□ -0.02
APH1B-208ENST00000560353 HMGB2P26583 209 aaKnown RBP14.94□□□□□ -0.02
APH1B-208ENST00000560353 FLAD1Q8NFF5 587 aa14.94□□□□□ -0.02
APH1B-208ENST00000560353 KAT6BQ8WYB5 2073 aa14.94□□□□□ -0.02
APH1B-208ENST00000560353 TUBGCP6Q96RT7 1819 aa14.94□□□□□ -0.02
APH1B-208ENST00000560353 ANKRD36BQ8N2N9 1353 aa14.93□□□□□ -0.02
APH1B-208ENST00000560353 QRICH2Q9H0J4 1663 aa14.93□□□□□ -0.02
APH1B-208ENST00000560353 IGSF1Q8N6C5 1336 aa14.92□□□□□ -0.02
APH1B-208ENST00000560353 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
APH1B-208ENST00000560353 PCNTO95613 3336 aa14.91□□□□□ -0.02
APH1B-208ENST00000560353 NBPF1Q3BBV0 1214 aa14.91□□□□□ -0.02
APH1B-208ENST00000560353 RBM46Q8TBY0 533 aaKnown RBP14.9□□□□□ -0.02
APH1B-208ENST00000560353 EVC2Q86UK5 1308 aa14.9□□□□□ -0.02
APH1B-208ENST00000560353 WWC3Q9ULE0 1092 aa14.89□□□□□ -0.03
APH1B-208ENST00000560353 KIAA1210Q9ULL0 1709 aa14.89□□□□□ -0.03
APH1B-208ENST00000560353 NSD2O96028 1365 aa14.88□□□□□ -0.03
APH1B-208ENST00000560353 USP47Q96K76 1375 aa14.88□□□□□ -0.03
APH1B-208ENST00000560353 LY75O60449 1722 aa14.87□□□□□ -0.03
APH1B-208ENST00000560353 FSTL1Q12841 308 aa14.87□□□□□ -0.03
APH1B-208ENST00000560353 C16orf71Q8IYS4 520 aaPredicted RBP14.87□□□□□ -0.03
APH1B-208ENST00000560353 NMRK2Q9NPI5 230 aa14.87□□□□□ -0.03
APH1B-208ENST00000560353 KTN1Q86UP2 1357 aaKnown RBP14.86□□□□□ -0.03
APH1B-208ENST00000560353 SLC34A2O95436 690 aa14.86□□□□□ -0.03
APH1B-208ENST00000560353 HTRA3P83110 453 aa14.86□□□□□ -0.03
APH1B-208ENST00000560353 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
APH1B-208ENST00000560353 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
APH1B-208ENST00000560353 ZCRB1Q8TBF4 217 aaKnown RBP14.84□□□□□ -0.03
APH1B-208ENST00000560353 RAB3GAP2Q9H2M9 1393 aa14.84□□□□□ -0.03
APH1B-208ENST00000560353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.83□□□□□ -0.04
APH1B-208ENST00000560353 CICQ96RK0 1608 aaPredicted RBP14.83□□□□□ -0.04
APH1B-208ENST00000560353 ARHGAP27Q6ZUM4 889 aa14.81□□□□□ -0.04
APH1B-208ENST00000560353 NME9Q86XW9 330 aa14.81□□□□□ -0.04
APH1B-208ENST00000560353 IP6K1Q92551 441 aa14.81□□□□□ -0.04
APH1B-208ENST00000560353 AK7Q96M32 723 aa14.81□□□□□ -0.04
APH1B-208ENST00000560353 LTV1Q96GA3 475 aaPredicted RBP14.8□□□□□ -0.04
APH1B-208ENST00000560353 DOT1LQ8TEK3 1739 aa14.8□□□□□ -0.04
APH1B-208ENST00000560353 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.79□□□□□ -0.04
APH1B-208ENST00000560353 NSD3Q9BZ95 1437 aa14.79□□□□□ -0.04
APH1B-208ENST00000560353 KDM2BQ8NHM5 1336 aa14.78□□□□□ -0.04
APH1B-208ENST00000560353 TGFB2P61812 414 aa14.78□□□□□ -0.04
APH1B-208ENST00000560353 BCS1LQ9Y276 419 aa14.78□□□□□ -0.04
APH1B-208ENST00000560353 C5P01031 1676 aa14.77□□□□□ -0.04
APH1B-208ENST00000560353 PALLDQ8WX93 1383 aa14.77□□□□□ -0.04
APH1B-208ENST00000560353 PHF14O94880 888 aa14.77□□□□□ -0.05
APH1B-208ENST00000560353 HSPA1AP0DMV8 641 aaKnown RBP14.77□□□□□ -0.05
APH1B-208ENST00000560353 HSPA1BP0DMV9 641 aaKnown RBP14.77□□□□□ -0.05
APH1B-208ENST00000560353 LTN1O94822 1766 aa14.77□□□□□ -0.05
APH1B-208ENST00000560353 PLEKHG2Q9H7P9 1386 aa14.76□□□□□ -0.05
APH1B-208ENST00000560353 SSFA2P28290 1259 aa14.76□□□□□ -0.05
APH1B-208ENST00000560353 AMIGO3Q86WK7 504 aa14.76□□□□□ -0.05
APH1B-208ENST00000560353 SMARCC1Q92922 1105 aaPredicted RBP14.76□□□□□ -0.05
APH1B-208ENST00000560353 SBNO2Q9Y2G9 1366 aa14.75□□□□□ -0.05
APH1B-208ENST00000560353 USP54Q70EL1 1684 aa14.75□□□□□ -0.05
APH1B-208ENST00000560353 CGNL1Q0VF96 1302 aa14.75□□□□□ -0.05
APH1B-208ENST00000560353 C9orf131Q5VYM1 1079 aa14.75□□□□□ -0.05
APH1B-208ENST00000560353 SMC1BQ8NDV3 1235 aa14.75□□□□□ -0.05
APH1B-208ENST00000560353 A0A0G2JLW4 131 aa14.74□□□□□ -0.05
APH1B-208ENST00000560353 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
APH1B-208ENST00000560353 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
APH1B-208ENST00000560353 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
APH1B-208ENST00000560353 MPRIPQ6WCQ1 1025 aa14.74□□□□□ -0.05
APH1B-208ENST00000560353 PCDH10Q9P2E7 1040 aa14.74□□□□□ -0.05
APH1B-208ENST00000560353 PXDNLA1KZ92 1463 aa14.74□□□□□ -0.05
APH1B-208ENST00000560353 FAM208AQ9UK61 1670 aaKnown RBP14.74□□□□□ -0.05
APH1B-208ENST00000560353 FCHSD2O94868 740 aa14.73□□□□□ -0.05
APH1B-208ENST00000560353 MMP10P09238 476 aa14.73□□□□□ -0.05
APH1B-208ENST00000560353 RRAGCQ9HB90 399 aa14.73□□□□□ -0.05
APH1B-208ENST00000560353 C10orf71Q711Q0 1435 aa14.73□□□□□ -0.05
APH1B-208ENST00000560353 C4BP0C0L5 1744 aa14.72□□□□□ -0.05
APH1B-208ENST00000560353 MON2Q7Z3U7 1717 aa14.72□□□□□ -0.05
APH1B-208ENST00000560353 MEGF6O75095 1541 aa14.72□□□□□ -0.05
APH1B-208ENST00000560353 SMIM5Q71RC9 77 aa14.72□□□□□ -0.05
APH1B-208ENST00000560353 HDGFL2Q7Z4V5 671 aaPredicted RBP14.72□□□□□ -0.05
APH1B-208ENST00000560353 RAPGEF4Q8WZA2 1011 aa14.71□□□□□ -0.05
APH1B-208ENST00000560353 HOXC9P31274 260 aa14.7□□□□□ -0.06
APH1B-208ENST00000560353 AMPHP49418 695 aa14.7□□□□□ -0.06
APH1B-208ENST00000560353 TAF1LQ8IZX4 1826 aa14.7□□□□□ -0.06
APH1B-208ENST00000560353 EDC4Q6P2E9 1401 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms