RNA–Protein interactions for RNA: ENST00000560352.5

NEO1-209, Transcript of neogenin 1, humanhuman

TSL 4

Gene NEO1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-209ENST00000560352 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
NEO1-209ENST00000560352 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
NEO1-209ENST00000560352 ZCRB1Q8TBF4 217 aaKnown RBP12.53□□□□□ -0.4
NEO1-209ENST00000560352 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
NEO1-209ENST00000560352 FCHSD2O94868 740 aa12.52□□□□□ -0.41
NEO1-209ENST00000560352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.41
NEO1-209ENST00000560352 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
NEO1-209ENST00000560352 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
NEO1-209ENST00000560352 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
NEO1-209ENST00000560352 C1orf141Q5JVX7 400 aa12.5□□□□□ -0.41
NEO1-209ENST00000560352 DDX54Q8TDD1 881 aaKnown RBP12.5□□□□□ -0.41
NEO1-209ENST00000560352 PCDH11XQ9BZA7 1347 aa12.5□□□□□ -0.41
NEO1-209ENST00000560352 PCDH11YQ9BZA8 1340 aa12.5□□□□□ -0.41
NEO1-209ENST00000560352 MAPK8IP3Q9UPT6 1336 aa12.5□□□□□ -0.41
NEO1-209ENST00000560352 COL3A1P02461 1466 aaPredicted RBP12.49□□□□□ -0.41
NEO1-209ENST00000560352 RGS12O14924 1447 aa12.49□□□□□ -0.41
NEO1-209ENST00000560352 CCER2I3L3R5 266 aa12.49□□□□□ -0.41
NEO1-209ENST00000560352 HSP90AB1P08238 724 aaKnown RBP12.49□□□□□ -0.41
NEO1-209ENST00000560352 OVOS2A0A0G2JMS6 1433 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 DISP2A7MBM2 1401 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 KDRP35968 1356 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 IFNL2Q8IZJ0 200 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 RGPD2P0DJD1 1756 aa12.48□□□□□ -0.41
NEO1-209ENST00000560352 PARP4Q9UKK3 1724 aaKnown RBP12.48□□□□□ -0.41
NEO1-209ENST00000560352 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
NEO1-209ENST00000560352 SF3B2Q13435 895 aaKnown RBP12.47□□□□□ -0.41
NEO1-209ENST00000560352 TNS2Q63HR2 1409 aa12.46□□□□□ -0.41
NEO1-209ENST00000560352 THSD7AQ9UPZ6 1657 aa12.46□□□□□ -0.41
NEO1-209ENST00000560352 ZNF530Q6P9A1 599 aaPredicted RBP12.46□□□□□ -0.41
NEO1-209ENST00000560352 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
NEO1-209ENST00000560352 MEGF6O75095 1541 aa12.46□□□□□ -0.42
NEO1-209ENST00000560352 AKAP4Q5JQC9 854 aa12.45□□□□□ -0.42
NEO1-209ENST00000560352 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
NEO1-209ENST00000560352 RNF39Q9H2S5 420 aa12.45□□□□□ -0.42
NEO1-209ENST00000560352 ADAMTS8Q9UP79 889 aa12.45□□□□□ -0.42
NEO1-209ENST00000560352 WNK3Q9BYP7 1800 aa12.44□□□□□ -0.42
NEO1-209ENST00000560352 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
NEO1-209ENST00000560352 FAM9BQ8IZU0 186 aa12.44□□□□□ -0.42
NEO1-209ENST00000560352 MIER1Q8N108 512 aa12.44□□□□□ -0.42
NEO1-209ENST00000560352 MARCH10Q8NA82 808 aaPredicted RBP12.44□□□□□ -0.42
NEO1-209ENST00000560352 RUNDC1Q96C34 613 aa12.44□□□□□ -0.42
NEO1-209ENST00000560352 RGPD1P0DJD0 1748 aa12.44□□□□□ -0.42
NEO1-209ENST00000560352 PHKG2P15735 406 aa12.43□□□□□ -0.42
NEO1-209ENST00000560352 MTHFSDQ2M296 383 aaKnown RBP12.43□□□□□ -0.42
NEO1-209ENST00000560352 PNISRQ8TF01 805 aaKnown RBP12.43□□□□□ -0.42
NEO1-209ENST00000560352 LRRC37A3O60309 1634 aa12.43□□□□□ -0.42
NEO1-209ENST00000560352 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
NEO1-209ENST00000560352 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
NEO1-209ENST00000560352 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
NEO1-209ENST00000560352 SYTL4Q96C24 671 aaPredicted RBP12.42□□□□□ -0.42
NEO1-209ENST00000560352 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
NEO1-209ENST00000560352 CYP27B1O15528 508 aa12.41□□□□□ -0.42
NEO1-209ENST00000560352 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
NEO1-209ENST00000560352 FAM182BQ5T319 152 aa12.41□□□□□ -0.42
NEO1-209ENST00000560352 ILDR2Q71H61 639 aa12.41□□□□□ -0.42
NEO1-209ENST00000560352 CABP4P57796 275 aa12.4□□□□□ -0.42
NEO1-209ENST00000560352 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
NEO1-209ENST00000560352 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
NEO1-209ENST00000560352 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
NEO1-209ENST00000560352 PLEKHF1Q96S99 279 aa12.4□□□□□ -0.42
NEO1-209ENST00000560352 BRWD3Q6RI45 1802 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 BCL9O00512 1426 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 ERVV-2B6SEH9 535 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 TRIM37O94972 964 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 HMGB2P26583 209 aaKnown RBP12.39□□□□□ -0.43
NEO1-209ENST00000560352 RIPK4P57078 832 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 MPRIPQ6WCQ1 1025 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
NEO1-209ENST00000560352 TMOD3Q9NYL9 352 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 PKD1L3Q7Z443 1732 aa12.39□□□□□ -0.43
NEO1-209ENST00000560352 TEFQ10587 303 aa12.38□□□□□ -0.43
NEO1-209ENST00000560352 NEUROD2Q15784 382 aa12.38□□□□□ -0.43
NEO1-209ENST00000560352 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
NEO1-209ENST00000560352 BAG6P46379 1132 aa12.37□□□□□ -0.43
NEO1-209ENST00000560352 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
NEO1-209ENST00000560352 APAF1O14727 1248 aa12.36□□□□□ -0.43
NEO1-209ENST00000560352 RNMTO43148 476 aaKnown RBP12.36□□□□□ -0.43
NEO1-209ENST00000560352 APBA3O96018 575 aa12.36□□□□□ -0.43
NEO1-209ENST00000560352 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
NEO1-209ENST00000560352 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
NEO1-209ENST00000560352 SMARCC1Q92922 1105 aaPredicted RBP12.35□□□□□ -0.43
NEO1-209ENST00000560352 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
NEO1-209ENST00000560352 UPF1Q92900 1129 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEO1-209ENST00000560352 SLC52A2Q9HAB3 445 aa12.34□□□□□ -0.43
NEO1-209ENST00000560352 KCNQ2O43526 872 aa12.33□□□□□ -0.44
NEO1-209ENST00000560352 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
NEO1-209ENST00000560352 TTC5Q8N0Z6 440 aa12.33□□□□□ -0.44
NEO1-209ENST00000560352 LGR6Q9HBX8 967 aa12.33□□□□□ -0.44
NEO1-209ENST00000560352 RRP7AQ9Y3A4 280 aaKnown RBP12.33□□□□□ -0.44
NEO1-209ENST00000560352 SHANK3Q9BYB0 1731 aa12.32□□□□□ -0.44
NEO1-209ENST00000560352 PLSCR1O15162 318 aa12.32□□□□□ -0.44
NEO1-209ENST00000560352 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
NEO1-209ENST00000560352 MCM10Q7L590 875 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms