RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 MSH5O43196 834 aa23.68■■□□□ 1.38
HERC1-207ENST00000560316 NSD2O96028 1365 aa23.67■■□□□ 1.38
HERC1-207ENST00000560316 GRIN3BO60391 1043 aa23.67■■□□□ 1.38
HERC1-207ENST00000560316 NEUROD1Q13562 356 aa23.67■■□□□ 1.38
HERC1-207ENST00000560316 EDC4Q6P2E9 1401 aaKnown RBP23.67■■□□□ 1.38
HERC1-207ENST00000560316 CCNL1Q9UK58 526 aaPredicted RBP23.66■■□□□ 1.38
HERC1-207ENST00000560316 DOT1LQ8TEK3 1739 aa23.66■■□□□ 1.38
HERC1-207ENST00000560316 LY75O60449 1722 aa23.65■■□□□ 1.38
HERC1-207ENST00000560316 COL23A1Q86Y22 540 aaPredicted RBP23.65■■□□□ 1.38
HERC1-207ENST00000560316 MSL1Q68DK7 614 aa23.64■■□□□ 1.37
HERC1-207ENST00000560316 A0A1W2PP64 1363 aa23.64■■□□□ 1.37
HERC1-207ENST00000560316 ATP10DQ9P241 1426 aa23.62■■□□□ 1.37
HERC1-207ENST00000560316 ZCRB1Q8TBF4 217 aaKnown RBP23.62■■□□□ 1.37
HERC1-207ENST00000560316 TERF2IPQ9NYB0 399 aa23.62■■□□□ 1.37
HERC1-207ENST00000560316 FAM208AQ9UK61 1670 aaKnown RBP23.61■■□□□ 1.37
HERC1-207ENST00000560316 FBLN1P23142 703 aa23.6■■□□□ 1.37
HERC1-207ENST00000560316 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
HERC1-207ENST00000560316 MEGF6O75095 1541 aa23.59■■□□□ 1.37
HERC1-207ENST00000560316 HOXC9P31274 260 aa23.59■■□□□ 1.37
HERC1-207ENST00000560316 USP47Q96K76 1375 aa23.58■■□□□ 1.37
HERC1-207ENST00000560316 CARD11Q9BXL7 1154 aa23.58■■□□□ 1.37
HERC1-207ENST00000560316 AMPHP49418 695 aa23.57■■□□□ 1.36
HERC1-207ENST00000560316 RGPD2P0DJD1 1756 aa23.57■■□□□ 1.36
HERC1-207ENST00000560316 GPBP1L1Q9HC44 474 aaPredicted RBP23.56■■□□□ 1.36
HERC1-207ENST00000560316 COG3Q96JB2 828 aa23.55■■□□□ 1.36
HERC1-207ENST00000560316 ZNF526Q8TF50 670 aaPredicted RBP23.54■■□□□ 1.36
HERC1-207ENST00000560316 CD2APQ9Y5K6 639 aa23.54■■□□□ 1.36
HERC1-207ENST00000560316 USHBP1Q8N6Y0 703 aa23.53■■□□□ 1.36
HERC1-207ENST00000560316 NBPF6Q5VWK0 638 aa23.52■■□□□ 1.36
HERC1-207ENST00000560316 NBPF4Q96M43 638 aa23.52■■□□□ 1.36
HERC1-207ENST00000560316 ADCY9O60503 1353 aa23.51■■□□□ 1.35
HERC1-207ENST00000560316 HSPA6P17066 643 aa23.5■■□□□ 1.35
HERC1-207ENST00000560316 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
HERC1-207ENST00000560316 C5P01031 1676 aa23.5■■□□□ 1.35
HERC1-207ENST00000560316 RRS1Q15050 365 aaKnown RBP23.49■■□□□ 1.35
HERC1-207ENST00000560316 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
HERC1-207ENST00000560316 FLAD1Q8NFF5 587 aa23.47■■□□□ 1.35
HERC1-207ENST00000560316 RAPGEF4Q8WZA2 1011 aa23.47■■□□□ 1.35
HERC1-207ENST00000560316 PALLDQ8WX93 1383 aa23.47■■□□□ 1.35
HERC1-207ENST00000560316 CGNL1Q0VF96 1302 aa23.46■■□□□ 1.35
HERC1-207ENST00000560316 AMIGO3Q86WK7 504 aa23.46■■□□□ 1.35
HERC1-207ENST00000560316 RTL1A6NKG5 1358 aa23.45■■□□□ 1.34
HERC1-207ENST00000560316 MPRIPQ6WCQ1 1025 aa23.45■■□□□ 1.34
HERC1-207ENST00000560316 SMIM5Q71RC9 77 aa23.45■■□□□ 1.34
HERC1-207ENST00000560316 IGSF1Q8N6C5 1336 aa23.44■■□□□ 1.34
HERC1-207ENST00000560316 TATP17735 454 aaPredicted RBP23.44■■□□□ 1.34
HERC1-207ENST00000560316 TAF1LQ8IZX4 1826 aa23.44■■□□□ 1.34
HERC1-207ENST00000560316 PCDH11XQ9BZA7 1347 aa23.42■■□□□ 1.34
HERC1-207ENST00000560316 PCDH11YQ9BZA8 1340 aa23.42■■□□□ 1.34
HERC1-207ENST00000560316 PHF14O94880 888 aa23.42■■□□□ 1.34
HERC1-207ENST00000560316 AK7Q96M32 723 aa23.42■■□□□ 1.34
HERC1-207ENST00000560316 C4BP0C0L5 1744 aa23.42■■□□□ 1.34
HERC1-207ENST00000560316 TESK2Q96S53 571 aa23.41■■□□□ 1.34
HERC1-207ENST00000560316 SMG6Q86US8 1419 aaKnown RBP23.41■■□□□ 1.34
HERC1-207ENST00000560316 GGNBP2Q9H3C7 697 aa23.4■■□□□ 1.34
HERC1-207ENST00000560316 TOGARAM1Q9Y4F4 1720 aa23.39■■□□□ 1.34
HERC1-207ENST00000560316 CYP27B1O15528 508 aa23.39■■□□□ 1.33
HERC1-207ENST00000560316 HMGB2P26583 209 aaKnown RBP23.39■■□□□ 1.33
HERC1-207ENST00000560316 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
HERC1-207ENST00000560316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.38■■□□□ 1.33
HERC1-207ENST00000560316 KIF3CO14782 793 aa23.38■■□□□ 1.33
HERC1-207ENST00000560316 FYB1O15117 783 aa23.38■■□□□ 1.33
HERC1-207ENST00000560316 HSP90AB2PQ58FF8 381 aa23.38■■□□□ 1.33
HERC1-207ENST00000560316 SMARCC1Q92922 1105 aaPredicted RBP23.37■■□□□ 1.33
HERC1-207ENST00000560316 UBR3Q6ZT12 1888 aa23.35■■□□□ 1.33
HERC1-207ENST00000560316 PIGBQ92521 554 aa23.35■■□□□ 1.33
HERC1-207ENST00000560316 ITGB4P16144 1822 aa23.34■■□□□ 1.33
HERC1-207ENST00000560316 INSRP06213 1382 aa23.34■■□□□ 1.33
HERC1-207ENST00000560316 LINC00116Q8NCU8 138 aa23.33■■□□□ 1.33
HERC1-207ENST00000560316 SSFA2P28290 1259 aa23.32■■□□□ 1.32
HERC1-207ENST00000560316 NSD3Q9BZ95 1437 aa23.32■■□□□ 1.32
HERC1-207ENST00000560316 FLT4P35916 1363 aa23.31■■□□□ 1.32
HERC1-207ENST00000560316 TONSLQ96HA7 1378 aa23.31■■□□□ 1.32
HERC1-207ENST00000560316 LOC102724428A0A0B4J2F2 783 aa23.3■■□□□ 1.32
HERC1-207ENST00000560316 SIK1P57059 783 aa23.3■■□□□ 1.32
HERC1-207ENST00000560316 GNPATO15228 680 aa23.28■■□□□ 1.32
HERC1-207ENST00000560316 APLP1P51693 650 aa23.28■■□□□ 1.32
HERC1-207ENST00000560316 MAP2P11137 1827 aaKnown RBP23.28■■□□□ 1.32
HERC1-207ENST00000560316 CICQ96RK0 1608 aaPredicted RBP23.27■■□□□ 1.32
HERC1-207ENST00000560316 ITPK1Q13572 414 aa23.27■■□□□ 1.32
HERC1-207ENST00000560316 NKX1-1Q15270 411 aaPredicted RBP23.27■■□□□ 1.32
HERC1-207ENST00000560316 PKD1L3Q7Z443 1732 aa23.27■■□□□ 1.32
HERC1-207ENST00000560316 MMP10P09238 476 aa23.26■■□□□ 1.31
HERC1-207ENST00000560316 ASAP1Q9ULH1 1129 aa23.26■■□□□ 1.31
HERC1-207ENST00000560316 EMILIN1Q9Y6C2 1016 aa23.26■■□□□ 1.31
HERC1-207ENST00000560316 PXDNLA1KZ92 1463 aa23.25■■□□□ 1.31
HERC1-207ENST00000560316 SLC24A1O60721 1099 aa23.25■■□□□ 1.31
HERC1-207ENST00000560316 ATP6V1AP38606 617 aa23.24■■□□□ 1.31
HERC1-207ENST00000560316 DNAJC5GQ8N7S2 189 aa23.24■■□□□ 1.31
HERC1-207ENST00000560316 TMOD3Q9NYL9 352 aa23.24■■□□□ 1.31
HERC1-207ENST00000560316 BCS1LQ9Y276 419 aa23.24■■□□□ 1.31
HERC1-207ENST00000560316 KIF24Q5T7B8 1368 aa23.24■■□□□ 1.31
HERC1-207ENST00000560316 TOMM70O94826 608 aa23.23■■□□□ 1.31
HERC1-207ENST00000560316 SPG7Q9UQ90 795 aa23.23■■□□□ 1.31
HERC1-207ENST00000560316 KIF20BQ96Q89 1820 aa23.22■■□□□ 1.31
HERC1-207ENST00000560316 A0A0G2JLW4 131 aa23.22■■□□□ 1.31
HERC1-207ENST00000560316 PPM1GO15355 546 aaPredicted RBP23.21■■□□□ 1.31
HERC1-207ENST00000560316 TMF1P82094 1093 aa23.21■■□□□ 1.31
HERC1-207ENST00000560316 NMRK2Q9NPI5 230 aa23.21■■□□□ 1.31
HERC1-207ENST00000560316 N4BP2Q86UW6 1770 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms