RNA–Protein interactions for RNA: ENST00000560067.1

USP3-AS1-205, USP3 antisense RNA 1, humanhuman

TSL 3

Gene USP3-AS1, Length 366 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-205ENST00000560067 MEGF6O75095 1541 aa16.83■□□□□ 0.28
USP3-AS1-205ENST00000560067 NPC1L1Q9UHC9 1359 aa16.81■□□□□ 0.28
USP3-AS1-205ENST00000560067 ANKRD26Q9UPS8 1709 aa16.81■□□□□ 0.28
USP3-AS1-205ENST00000560067 MTHFSP49914 203 aa16.8■□□□□ 0.28
USP3-AS1-205ENST00000560067 TNS1Q9HBL0 1735 aaKnown RBP16.79■□□□□ 0.28
USP3-AS1-205ENST00000560067 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
USP3-AS1-205ENST00000560067 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
USP3-AS1-205ENST00000560067 NBPF14Q5TI25 921 aa16.79■□□□□ 0.28
USP3-AS1-205ENST00000560067 SPG7Q9UQ90 795 aa16.79■□□□□ 0.28
USP3-AS1-205ENST00000560067 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
USP3-AS1-205ENST00000560067 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
USP3-AS1-205ENST00000560067 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
USP3-AS1-205ENST00000560067 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
USP3-AS1-205ENST00000560067 PSDA5PKW4 1024 aaPredicted RBP16.77■□□□□ 0.28
USP3-AS1-205ENST00000560067 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
USP3-AS1-205ENST00000560067 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.28
USP3-AS1-205ENST00000560067 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.27
USP3-AS1-205ENST00000560067 R3HDM1Q15032 1099 aaKnown RBP16.76■□□□□ 0.27
USP3-AS1-205ENST00000560067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP3-AS1-205ENST00000560067 CYP27B1O15528 508 aa16.75■□□□□ 0.27
USP3-AS1-205ENST00000560067 IL13P35225 146 aa16.75■□□□□ 0.27
USP3-AS1-205ENST00000560067 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
USP3-AS1-205ENST00000560067 PROM2Q8N271 834 aa16.74■□□□□ 0.27
USP3-AS1-205ENST00000560067 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
USP3-AS1-205ENST00000560067 SULT6B1Q6IMI4 303 aa16.73■□□□□ 0.27
USP3-AS1-205ENST00000560067 PLEKHO1Q53GL0 409 aaPredicted RBP16.72■□□□□ 0.27
USP3-AS1-205ENST00000560067 IFNL2Q8IZJ0 200 aa16.72■□□□□ 0.27
USP3-AS1-205ENST00000560067 SBF2Q86WG5 1849 aa16.72■□□□□ 0.27
USP3-AS1-205ENST00000560067 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
USP3-AS1-205ENST00000560067 AMOTQ4VCS5 1084 aa16.71■□□□□ 0.27
USP3-AS1-205ENST00000560067 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
USP3-AS1-205ENST00000560067 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.27
USP3-AS1-205ENST00000560067 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
USP3-AS1-205ENST00000560067 PHKG2P15735 406 aa16.7■□□□□ 0.26
USP3-AS1-205ENST00000560067 CFAP53Q96M91 514 aa16.7■□□□□ 0.26
USP3-AS1-205ENST00000560067 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
USP3-AS1-205ENST00000560067 SLC27A3Q5K4L6 730 aa16.68■□□□□ 0.26
USP3-AS1-205ENST00000560067 ZNF530Q6P9A1 599 aaPredicted RBP16.68■□□□□ 0.26
USP3-AS1-205ENST00000560067 STK32BQ9NY57 414 aa16.68■□□□□ 0.26
USP3-AS1-205ENST00000560067 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
USP3-AS1-205ENST00000560067 HMOX1P09601 288 aa16.67■□□□□ 0.26
USP3-AS1-205ENST00000560067 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
USP3-AS1-205ENST00000560067 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
USP3-AS1-205ENST00000560067 KDRP35968 1356 aa16.66■□□□□ 0.26
USP3-AS1-205ENST00000560067 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
USP3-AS1-205ENST00000560067 DDX10Q13206 875 aaKnown RBP16.66■□□□□ 0.26
USP3-AS1-205ENST00000560067 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
USP3-AS1-205ENST00000560067 RREB1Q92766 1687 aa16.65■□□□□ 0.26
USP3-AS1-205ENST00000560067 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
USP3-AS1-205ENST00000560067 RGPD3A6NKT7 1758 aaPredicted RBP16.65■□□□□ 0.26
USP3-AS1-205ENST00000560067 RGPD4Q7Z3J3 1758 aa16.65■□□□□ 0.26
USP3-AS1-205ENST00000560067 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
USP3-AS1-205ENST00000560067 TMOD3Q9NYL9 352 aa16.65■□□□□ 0.26
USP3-AS1-205ENST00000560067 SLC15A2Q16348 729 aa16.64■□□□□ 0.25
USP3-AS1-205ENST00000560067 PIGBQ92521 554 aa16.64■□□□□ 0.25
USP3-AS1-205ENST00000560067 SMARCC1Q92922 1105 aaPredicted RBP16.64■□□□□ 0.25
USP3-AS1-205ENST00000560067 DCAF5Q96JK2 942 aa16.64■□□□□ 0.25
USP3-AS1-205ENST00000560067 CCNL1Q9UK58 526 aaPredicted RBP16.64■□□□□ 0.25
USP3-AS1-205ENST00000560067 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
USP3-AS1-205ENST00000560067 KAT6BQ8WYB5 2073 aa16.64■□□□□ 0.25
USP3-AS1-205ENST00000560067 NUP188Q5SRE5 1749 aa16.63■□□□□ 0.25
USP3-AS1-205ENST00000560067 PKD1L3Q7Z443 1732 aa16.63■□□□□ 0.25
USP3-AS1-205ENST00000560067 BTAF1O14981 1849 aa16.62■□□□□ 0.25
USP3-AS1-205ENST00000560067 ERVV-2B6SEH9 535 aa16.62■□□□□ 0.25
USP3-AS1-205ENST00000560067 HMGB2P26583 209 aaKnown RBP16.62■□□□□ 0.25
USP3-AS1-205ENST00000560067 KCNQ4P56696 695 aa16.62■□□□□ 0.25
USP3-AS1-205ENST00000560067 DOT1LQ8TEK3 1739 aa16.62■□□□□ 0.25
USP3-AS1-205ENST00000560067 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
USP3-AS1-205ENST00000560067 CABP4P57796 275 aa16.6■□□□□ 0.25
USP3-AS1-205ENST00000560067 AKAP4Q5JQC9 854 aa16.6■□□□□ 0.25
USP3-AS1-205ENST00000560067 COL3A1P02461 1466 aaPredicted RBP16.6■□□□□ 0.25
USP3-AS1-205ENST00000560067 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 RALBP1Q15311 655 aa16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 ZNF827Q17R98 1081 aa16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 MTHFSDQ2M296 383 aaKnown RBP16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 PIAS4Q8N2W9 510 aaPredicted RBP16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 SPON1Q9HCB6 807 aa16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 ASAP1Q9ULH1 1129 aa16.58■□□□□ 0.24
USP3-AS1-205ENST00000560067 PDGFDQ9GZP0 370 aaPredicted RBP16.57■□□□□ 0.24
USP3-AS1-205ENST00000560067 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
USP3-AS1-205ENST00000560067 KDM6AO15550 1401 aaPredicted RBP16.55■□□□□ 0.24
USP3-AS1-205ENST00000560067 LOC102724428A0A0B4J2F2 783 aa16.55■□□□□ 0.24
USP3-AS1-205ENST00000560067 ZBTB7AO95365 584 aa16.55■□□□□ 0.24
USP3-AS1-205ENST00000560067 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
USP3-AS1-205ENST00000560067 SIK1P57059 783 aa16.55■□□□□ 0.24
USP3-AS1-205ENST00000560067 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
USP3-AS1-205ENST00000560067 GAS2L2Q8NHY3 880 aa16.55■□□□□ 0.24
USP3-AS1-205ENST00000560067 FCHSD2O94868 740 aa16.54■□□□□ 0.24
USP3-AS1-205ENST00000560067 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
USP3-AS1-205ENST00000560067 SRCAPQ6ZRS2 3230 aa16.54■□□□□ 0.24
USP3-AS1-205ENST00000560067 TOGARAM1Q9Y4F4 1720 aa16.53■□□□□ 0.24
USP3-AS1-205ENST00000560067 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
USP3-AS1-205ENST00000560067 ATP6V1AP38606 617 aa16.53■□□□□ 0.24
USP3-AS1-205ENST00000560067 LGR6Q9HBX8 967 aa16.53■□□□□ 0.24
USP3-AS1-205ENST00000560067 PPP1R1BQ9UD71 204 aaPredicted RBP16.53■□□□□ 0.24
USP3-AS1-205ENST00000560067 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
USP3-AS1-205ENST00000560067 RBM42Q9BTD8 480 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms