RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 NBPF14Q5TI25 921 aa23.62■■□□□ 1.37
AC105339.3-201ENST00000560043 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
AC105339.3-201ENST00000560043 R3HDM1Q15032 1099 aaKnown RBP23.6■■□□□ 1.37
AC105339.3-201ENST00000560043 EYA1Q99502 592 aa23.6■■□□□ 1.37
AC105339.3-201ENST00000560043 EIF4A2Q14240 407 aaKnown RBP23.59■■□□□ 1.37
AC105339.3-201ENST00000560043 RREB1Q92766 1687 aa23.59■■□□□ 1.37
AC105339.3-201ENST00000560043 NHSQ6T4R5 1651 aa23.58■■□□□ 1.37
AC105339.3-201ENST00000560043 RGPD3A6NKT7 1758 aaPredicted RBP23.57■■□□□ 1.36
AC105339.3-201ENST00000560043 RGPD4Q7Z3J3 1758 aa23.57■■□□□ 1.36
AC105339.3-201ENST00000560043 NCAPD2Q15021 1401 aa23.57■■□□□ 1.36
AC105339.3-201ENST00000560043 KAT6BQ8WYB5 2073 aa23.55■■□□□ 1.36
AC105339.3-201ENST00000560043 TXNRD1Q16881 649 aa23.55■■□□□ 1.36
AC105339.3-201ENST00000560043 PROM2Q8N271 834 aa23.55■■□□□ 1.36
AC105339.3-201ENST00000560043 NUP188Q5SRE5 1749 aa23.55■■□□□ 1.36
AC105339.3-201ENST00000560043 PCDH11XQ9BZA7 1347 aa23.55■■□□□ 1.36
AC105339.3-201ENST00000560043 PCDH11YQ9BZA8 1340 aa23.55■■□□□ 1.36
AC105339.3-201ENST00000560043 PRIM1P49642 420 aaKnown RBP23.54■■□□□ 1.36
AC105339.3-201ENST00000560043 CC2D1BQ5T0F9 858 aaKnown RBP23.54■■□□□ 1.36
AC105339.3-201ENST00000560043 SYTL4Q96C24 671 aaPredicted RBP23.53■■□□□ 1.36
AC105339.3-201ENST00000560043 SPG7Q9UQ90 795 aa23.53■■□□□ 1.36
AC105339.3-201ENST00000560043 NPC1L1Q9UHC9 1359 aa23.52■■□□□ 1.36
AC105339.3-201ENST00000560043 SHANK3Q9BYB0 1731 aa23.52■■□□□ 1.36
AC105339.3-201ENST00000560043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.51■■□□□ 1.35
AC105339.3-201ENST00000560043 IGSF1Q8N6C5 1336 aa23.51■■□□□ 1.35
AC105339.3-201ENST00000560043 CYP27B1O15528 508 aa23.5■■□□□ 1.35
AC105339.3-201ENST00000560043 BTAF1O14981 1849 aa23.49■■□□□ 1.35
AC105339.3-201ENST00000560043 MTHFSP49914 203 aa23.48■■□□□ 1.35
AC105339.3-201ENST00000560043 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
AC105339.3-201ENST00000560043 DOT1LQ8TEK3 1739 aa23.46■■□□□ 1.35
AC105339.3-201ENST00000560043 ANO8Q9HCE9 1232 aaPredicted RBP23.46■■□□□ 1.35
AC105339.3-201ENST00000560043 PKD1L3Q7Z443 1732 aa23.45■■□□□ 1.34
AC105339.3-201ENST00000560043 PLEKHG2Q9H7P9 1386 aa23.45■■□□□ 1.34
AC105339.3-201ENST00000560043 IL13P35225 146 aa23.45■■□□□ 1.34
AC105339.3-201ENST00000560043 STK32BQ9NY57 414 aa23.45■■□□□ 1.34
AC105339.3-201ENST00000560043 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
AC105339.3-201ENST00000560043 SLC27A3Q5K4L6 730 aa23.43■■□□□ 1.34
AC105339.3-201ENST00000560043 IFNL2Q8IZJ0 200 aa23.43■■□□□ 1.34
AC105339.3-201ENST00000560043 SLC15A2Q16348 729 aa23.42■■□□□ 1.34
AC105339.3-201ENST00000560043 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
AC105339.3-201ENST00000560043 PHKG2P15735 406 aa23.41■■□□□ 1.34
AC105339.3-201ENST00000560043 SULT6B1Q6IMI4 303 aa23.41■■□□□ 1.34
AC105339.3-201ENST00000560043 LRP5O75197 1615 aa23.41■■□□□ 1.34
AC105339.3-201ENST00000560043 AMOTQ4VCS5 1084 aa23.4■■□□□ 1.34
AC105339.3-201ENST00000560043 MPRIPQ6WCQ1 1025 aa23.4■■□□□ 1.34
AC105339.3-201ENST00000560043 AEBP1Q8IUX7 1158 aa23.4■■□□□ 1.34
AC105339.3-201ENST00000560043 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
AC105339.3-201ENST00000560043 DIAPH1O60610 1272 aaKnown RBP23.39■■□□□ 1.33
AC105339.3-201ENST00000560043 KDRP35968 1356 aa23.37■■□□□ 1.33
AC105339.3-201ENST00000560043 HSP90AB1P08238 724 aaKnown RBP23.36■■□□□ 1.33
AC105339.3-201ENST00000560043 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
AC105339.3-201ENST00000560043 CCNL1Q9UK58 526 aaPredicted RBP23.36■■□□□ 1.33
AC105339.3-201ENST00000560043 PIGBQ92521 554 aa23.35■■□□□ 1.33
AC105339.3-201ENST00000560043 SMARCC1Q92922 1105 aaPredicted RBP23.35■■□□□ 1.33
AC105339.3-201ENST00000560043 SPON1Q9HCB6 807 aa23.35■■□□□ 1.33
AC105339.3-201ENST00000560043 KCNQ4P56696 695 aa23.34■■□□□ 1.33
AC105339.3-201ENST00000560043 TMOD3Q9NYL9 352 aa23.34■■□□□ 1.33
AC105339.3-201ENST00000560043 SRCAPQ6ZRS2 3230 aa23.34■■□□□ 1.33
AC105339.3-201ENST00000560043 TOGARAM1Q9Y4F4 1720 aa23.33■■□□□ 1.32
AC105339.3-201ENST00000560043 PAPPAQ13219 1627 aa23.33■■□□□ 1.32
AC105339.3-201ENST00000560043 PALLDQ8WX93 1383 aa23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 HMOX1P09601 288 aa23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 HMGB2P26583 209 aaKnown RBP23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 ZNF827Q17R98 1081 aa23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 C1orf141Q5JVX7 400 aa23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 AKT1S1Q96B36 256 aa23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 DCAF5Q96JK2 942 aa23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 PDGFDQ9GZP0 370 aaPredicted RBP23.32■■□□□ 1.32
AC105339.3-201ENST00000560043 LY75O60449 1722 aa23.31■■□□□ 1.32
AC105339.3-201ENST00000560043 CFAP53Q96M91 514 aa23.31■■□□□ 1.32
AC105339.3-201ENST00000560043 ITGB4P16144 1822 aa23.31■■□□□ 1.32
AC105339.3-201ENST00000560043 ERVV-2B6SEH9 535 aa23.3■■□□□ 1.32
AC105339.3-201ENST00000560043 PPP2R1AP30153 589 aa23.29■■□□□ 1.32
AC105339.3-201ENST00000560043 CASZ1Q86V15 1759 aa23.29■■□□□ 1.32
AC105339.3-201ENST00000560043 COL3A1P02461 1466 aaPredicted RBP23.29■■□□□ 1.32
AC105339.3-201ENST00000560043 U2SURPO15042 1029 aaKnown RBP23.28■■□□□ 1.32
AC105339.3-201ENST00000560043 ZBTB7AO95365 584 aa23.28■■□□□ 1.32
AC105339.3-201ENST00000560043 TFCP2L1Q9NZI6 479 aa23.28■■□□□ 1.32
AC105339.3-201ENST00000560043 PPP1R1BQ9UD71 204 aaPredicted RBP23.26■■□□□ 1.31
AC105339.3-201ENST00000560043 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
AC105339.3-201ENST00000560043 CABP4P57796 275 aa23.25■■□□□ 1.31
AC105339.3-201ENST00000560043 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
AC105339.3-201ENST00000560043 MTFR1LQ9H019 292 aa23.25■■□□□ 1.31
AC105339.3-201ENST00000560043 ASAP1Q9ULH1 1129 aa23.25■■□□□ 1.31
AC105339.3-201ENST00000560043 ATF5Q9Y2D1 282 aaPredicted RBP23.25■■□□□ 1.31
AC105339.3-201ENST00000560043 NUDCQ9Y266 331 aa23.24■■□□□ 1.31
AC105339.3-201ENST00000560043 KDM6AO15550 1401 aaPredicted RBP23.24■■□□□ 1.31
AC105339.3-201ENST00000560043 LOC102724428A0A0B4J2F2 783 aa23.23■■□□□ 1.31
AC105339.3-201ENST00000560043 SIK1P57059 783 aa23.23■■□□□ 1.31
AC105339.3-201ENST00000560043 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
AC105339.3-201ENST00000560043 SLC16A10Q8TF71 515 aa23.22■■□□□ 1.31
AC105339.3-201ENST00000560043 PNPLA7Q6ZV29 1317 aa23.22■■□□□ 1.31
AC105339.3-201ENST00000560043 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
AC105339.3-201ENST00000560043 DDX10Q13206 875 aaKnown RBP23.2■■□□□ 1.3
AC105339.3-201ENST00000560043 PTGER2P43116 358 aa23.19■■□□□ 1.3
AC105339.3-201ENST00000560043 ATP6V1AP38606 617 aa23.18■■□□□ 1.3
AC105339.3-201ENST00000560043 NFATC2IPQ8NCF5 419 aa23.18■■□□□ 1.3
AC105339.3-201ENST00000560043 QSER1Q2KHR3 1735 aa23.18■■□□□ 1.3
AC105339.3-201ENST00000560043 C5P01031 1676 aa23.18■■□□□ 1.3
AC105339.3-201ENST00000560043 MSH5O43196 834 aa23.17■■□□□ 1.3
AC105339.3-201ENST00000560043 AK7Q96M32 723 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms