RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 ANKRD36BQ8N2N9 1353 aa22.35■■□□□ 1.17
AC243562.3-201ENST00000559866 TFCP2L1Q9NZI6 479 aa22.34■■□□□ 1.17
AC243562.3-201ENST00000559866 LTV1Q96GA3 475 aaPredicted RBP22.33■■□□□ 1.17
AC243562.3-201ENST00000559866 SLC12A5Q9H2X9 1139 aa22.33■■□□□ 1.17
AC243562.3-201ENST00000559866 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
AC243562.3-201ENST00000559866 PRIM1P49642 420 aaKnown RBP22.32■■□□□ 1.16
AC243562.3-201ENST00000559866 IFFO2Q5TF58 517 aa22.32■■□□□ 1.16
AC243562.3-201ENST00000559866 SYTL4Q96C24 671 aaPredicted RBP22.31■■□□□ 1.16
AC243562.3-201ENST00000559866 TMC1Q8TDI8 760 aa22.3■■□□□ 1.16
AC243562.3-201ENST00000559866 IP6K1Q92551 441 aa22.3■■□□□ 1.16
AC243562.3-201ENST00000559866 FBLN1P23142 703 aa22.29■■□□□ 1.16
AC243562.3-201ENST00000559866 COL23A1Q86Y22 540 aaPredicted RBP22.29■■□□□ 1.16
AC243562.3-201ENST00000559866 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
AC243562.3-201ENST00000559866 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
AC243562.3-201ENST00000559866 MSL1Q68DK7 614 aa22.27■■□□□ 1.16
AC243562.3-201ENST00000559866 HDGFL2Q7Z4V5 671 aaPredicted RBP22.26■■□□□ 1.15
AC243562.3-201ENST00000559866 CCNL1Q9UK58 526 aaPredicted RBP22.26■■□□□ 1.15
AC243562.3-201ENST00000559866 MAP3K19Q56UN5 1328 aa22.26■■□□□ 1.15
AC243562.3-201ENST00000559866 ITGB4P16144 1822 aa22.24■■□□□ 1.15
AC243562.3-201ENST00000559866 HOXC9P31274 260 aa22.24■■□□□ 1.15
AC243562.3-201ENST00000559866 UBR3Q6ZT12 1888 aa22.23■■□□□ 1.15
AC243562.3-201ENST00000559866 ADCY9O60503 1353 aa22.23■■□□□ 1.15
AC243562.3-201ENST00000559866 C4BP0C0L5 1744 aa22.23■■□□□ 1.15
AC243562.3-201ENST00000559866 MSH5O43196 834 aa22.22■■□□□ 1.15
AC243562.3-201ENST00000559866 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
AC243562.3-201ENST00000559866 GRIN3BO60391 1043 aa22.2■■□□□ 1.14
AC243562.3-201ENST00000559866 USHBP1Q8N6Y0 703 aa22.2■■□□□ 1.14
AC243562.3-201ENST00000559866 CARD11Q9BXL7 1154 aa22.2■■□□□ 1.14
AC243562.3-201ENST00000559866 USP47Q96K76 1375 aa22.2■■□□□ 1.14
AC243562.3-201ENST00000559866 AMIGO3Q86WK7 504 aa22.19■■□□□ 1.14
AC243562.3-201ENST00000559866 TERF2IPQ9NYB0 399 aa22.19■■□□□ 1.14
AC243562.3-201ENST00000559866 PKD1L3Q7Z443 1732 aa22.17■■□□□ 1.14
AC243562.3-201ENST00000559866 NBPF6Q5VWK0 638 aa22.17■■□□□ 1.14
AC243562.3-201ENST00000559866 NBPF4Q96M43 638 aa22.17■■□□□ 1.14
AC243562.3-201ENST00000559866 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
AC243562.3-201ENST00000559866 KIF20BQ96Q89 1820 aa22.17■■□□□ 1.14
AC243562.3-201ENST00000559866 SMIM5Q71RC9 77 aa22.16■■□□□ 1.14
AC243562.3-201ENST00000559866 ZNF526Q8TF50 670 aaPredicted RBP22.16■■□□□ 1.14
AC243562.3-201ENST00000559866 KIAA1551Q9HCM1 1747 aa22.16■■□□□ 1.14
AC243562.3-201ENST00000559866 AMPHP49418 695 aa22.15■■□□□ 1.14
AC243562.3-201ENST00000559866 WWC3Q9ULE0 1092 aa22.15■■□□□ 1.14
AC243562.3-201ENST00000559866 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
AC243562.3-201ENST00000559866 RRS1Q15050 365 aaKnown RBP22.14■■□□□ 1.13
AC243562.3-201ENST00000559866 COG3Q96JB2 828 aa22.14■■□□□ 1.13
AC243562.3-201ENST00000559866 PALLDQ8WX93 1383 aa22.13■■□□□ 1.13
AC243562.3-201ENST00000559866 GPBP1L1Q9HC44 474 aaPredicted RBP22.12■■□□□ 1.13
AC243562.3-201ENST00000559866 CD2APQ9Y5K6 639 aa22.12■■□□□ 1.13
AC243562.3-201ENST00000559866 CICQ96RK0 1608 aaPredicted RBP22.12■■□□□ 1.13
AC243562.3-201ENST00000559866 TESK2Q96S53 571 aa22.11■■□□□ 1.13
AC243562.3-201ENST00000559866 HSPA6P17066 643 aa22.1■■□□□ 1.13
AC243562.3-201ENST00000559866 PUS7Q96PZ0 661 aaKnown RBP22.09■■□□□ 1.13
AC243562.3-201ENST00000559866 KIF13BQ9NQT8 1826 aa22.08■■□□□ 1.13
AC243562.3-201ENST00000559866 N4BP2Q86UW6 1770 aaPredicted RBP22.08■■□□□ 1.13
AC243562.3-201ENST00000559866 IGSF1Q8N6C5 1336 aa22.07■■□□□ 1.12
AC243562.3-201ENST00000559866 MPRIPQ6WCQ1 1025 aa22.07■■□□□ 1.12
AC243562.3-201ENST00000559866 ANKRD26Q9UPS8 1709 aa22.06■■□□□ 1.12
AC243562.3-201ENST00000559866 CYP27B1O15528 508 aa22.06■■□□□ 1.12
AC243562.3-201ENST00000559866 GGNBP2Q9H3C7 697 aa22.06■■□□□ 1.12
AC243562.3-201ENST00000559866 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
AC243562.3-201ENST00000559866 CGNL1Q0VF96 1302 aa22.06■■□□□ 1.12
AC243562.3-201ENST00000559866 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
AC243562.3-201ENST00000559866 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
AC243562.3-201ENST00000559866 PHF14O94880 888 aa22.05■■□□□ 1.12
AC243562.3-201ENST00000559866 HSP90AB2PQ58FF8 381 aa22.05■■□□□ 1.12
AC243562.3-201ENST00000559866 RAPGEF4Q8WZA2 1011 aa22.05■■□□□ 1.12
AC243562.3-201ENST00000559866 INSRP06213 1382 aa22.03■■□□□ 1.12
AC243562.3-201ENST00000559866 ST20-MTHFSA0A0A6YYL1 179 aa22.03■■□□□ 1.12
AC243562.3-201ENST00000559866 KIF3CO14782 793 aa22.03■■□□□ 1.12
AC243562.3-201ENST00000559866 FYB1O15117 783 aa22.03■■□□□ 1.12
AC243562.3-201ENST00000559866 TATP17735 454 aaPredicted RBP22.03■■□□□ 1.12
AC243562.3-201ENST00000559866 FLAD1Q8NFF5 587 aa22.02■■□□□ 1.12
AC243562.3-201ENST00000559866 BRCA1P38398 1863 aaKnown RBP22.01■■□□□ 1.11
AC243562.3-201ENST00000559866 NCAPD2Q15021 1401 aa22.01■■□□□ 1.11
AC243562.3-201ENST00000559866 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.01■■□□□ 1.11
AC243562.3-201ENST00000559866 AK7Q96M32 723 aa22.01■■□□□ 1.11
AC243562.3-201ENST00000559866 LINC00116Q8NCU8 138 aa22■■□□□ 1.11
AC243562.3-201ENST00000559866 PXDNLA1KZ92 1463 aa22■■□□□ 1.11
AC243562.3-201ENST00000559866 FLT4P35916 1363 aa21.99■■□□□ 1.11
AC243562.3-201ENST00000559866 PIGBQ92521 554 aa21.99■■□□□ 1.11
AC243562.3-201ENST00000559866 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
AC243562.3-201ENST00000559866 TONSLQ96HA7 1378 aa21.97■■□□□ 1.11
AC243562.3-201ENST00000559866 WDR90Q96KV7 1748 aa21.97■■□□□ 1.11
AC243562.3-201ENST00000559866 ITPK1Q13572 414 aa21.96■■□□□ 1.11
AC243562.3-201ENST00000559866 C4AP0C0L4 1744 aa21.96■■□□□ 1.11
AC243562.3-201ENST00000559866 NSD3Q9BZ95 1437 aa21.95■■□□□ 1.1
AC243562.3-201ENST00000559866 SSFA2P28290 1259 aa21.94■■□□□ 1.1
AC243562.3-201ENST00000559866 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
AC243562.3-201ENST00000559866 EMILIN1Q9Y6C2 1016 aa21.94■■□□□ 1.1
AC243562.3-201ENST00000559866 LOC102724428A0A0B4J2F2 783 aa21.93■■□□□ 1.1
AC243562.3-201ENST00000559866 SIK1P57059 783 aa21.93■■□□□ 1.1
AC243562.3-201ENST00000559866 KIF24Q5T7B8 1368 aa21.92■■□□□ 1.1
AC243562.3-201ENST00000559866 NKX1-1Q15270 411 aaPredicted RBP21.92■■□□□ 1.1
AC243562.3-201ENST00000559866 ZNF831Q5JPB2 1677 aa21.91■■□□□ 1.1
AC243562.3-201ENST00000559866 GNPATO15228 680 aa21.91■■□□□ 1.1
AC243562.3-201ENST00000559866 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
AC243562.3-201ENST00000559866 C10orf71Q711Q0 1435 aa21.9■■□□□ 1.1
AC243562.3-201ENST00000559866 ARFGEF1Q9Y6D6 1849 aa21.9■■□□□ 1.1
AC243562.3-201ENST00000559866 KDRP35968 1356 aa21.89■■□□□ 1.1
AC243562.3-201ENST00000559866 MMP10P09238 476 aa21.89■■□□□ 1.09
AC243562.3-201ENST00000559866 DNAJC5GQ8N7S2 189 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms