RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
CTDSPL2-208ENST00000559793 IFT172Q9UG01 1749 aa12□□□□□ -0.49
CTDSPL2-208ENST00000559793 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
CTDSPL2-208ENST00000559793 ONECUT3O60422 494 aaPredicted RBP11.99□□□□□ -0.49
CTDSPL2-208ENST00000559793 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
CTDSPL2-208ENST00000559793 C14orf93Q9H972 538 aaKnown RBP11.99□□□□□ -0.49
CTDSPL2-208ENST00000559793 BLMP54132 1417 aaPredicted RBP11.99□□□□□ -0.49
CTDSPL2-208ENST00000559793 YTHDC2Q9H6S0 1430 aaKnown RBP11.99□□□□□ -0.49
CTDSPL2-208ENST00000559793 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
CTDSPL2-208ENST00000559793 PIK3C2GO75747 1445 aa11.98□□□□□ -0.49
CTDSPL2-208ENST00000559793 PTPREP23469 700 aa11.98□□□□□ -0.49
CTDSPL2-208ENST00000559793 PSME1Q06323 249 aa11.98□□□□□ -0.49
CTDSPL2-208ENST00000559793 NBR1Q14596 966 aa11.98□□□□□ -0.49
CTDSPL2-208ENST00000559793 VPS72Q15906 364 aa11.98□□□□□ -0.49
CTDSPL2-208ENST00000559793 FAM83GA6ND36 823 aa11.97□□□□□ -0.49
CTDSPL2-208ENST00000559793 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
CTDSPL2-208ENST00000559793 DMRTA1Q5VZB9 504 aa11.97□□□□□ -0.49
CTDSPL2-208ENST00000559793 KIF1AQ12756 1690 aa11.97□□□□□ -0.49
CTDSPL2-208ENST00000559793 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
CTDSPL2-208ENST00000559793 LMOD2Q6P5Q4 547 aa11.96□□□□□ -0.49
CTDSPL2-208ENST00000559793 ANKRD13DQ6ZTN6 518 aa11.96□□□□□ -0.49
CTDSPL2-208ENST00000559793 OSBPP22059 807 aa11.95□□□□□ -0.5
CTDSPL2-208ENST00000559793 MLLT3P42568 568 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-208ENST00000559793 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
CTDSPL2-208ENST00000559793 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTDSPL2-208ENST00000559793 KRT27Q7Z3Y8 459 aa11.95□□□□□ -0.5
CTDSPL2-208ENST00000559793 SPNS2Q8IVW8 549 aa11.95□□□□□ -0.5
CTDSPL2-208ENST00000559793 CCDC9Q9Y3X0 531 aaKnown RBP11.95□□□□□ -0.5
CTDSPL2-208ENST00000559793 TNS3Q68CZ2 1445 aa11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 SBNO1A3KN83 1393 aa11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 SEMA3EO15041 775 aa11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 SF3B2Q13435 895 aaKnown RBP11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 C6orf132Q5T0Z8 1188 aa11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 PMFBP1Q8TBY8 1022 aa11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 PRAM1Q96QH2 718 aa11.94□□□□□ -0.5
CTDSPL2-208ENST00000559793 PRIM1P49642 420 aaKnown RBP11.93□□□□□ -0.5
CTDSPL2-208ENST00000559793 NWD2Q9ULI1 1742 aa11.93□□□□□ -0.5
CTDSPL2-208ENST00000559793 NRXN1Q9ULB1 1477 aa11.93□□□□□ -0.5
CTDSPL2-208ENST00000559793 PLCH1Q4KWH8 1693 aa11.92□□□□□ -0.5
CTDSPL2-208ENST00000559793 TK2O00142 265 aa11.91□□□□□ -0.5
CTDSPL2-208ENST00000559793 BTG4Q9NY30 223 aa11.91□□□□□ -0.5
CTDSPL2-208ENST00000559793 POGKQ9P215 609 aa11.91□□□□□ -0.5
CTDSPL2-208ENST00000559793 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
CTDSPL2-208ENST00000559793 ARHGEF10O15013 1369 aa11.91□□□□□ -0.5
CTDSPL2-208ENST00000559793 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
CTDSPL2-208ENST00000559793 MAP3K7O43318 606 aa11.9□□□□□ -0.5
CTDSPL2-208ENST00000559793 FAM98CQ17RN3 349 aaKnown RBP11.9□□□□□ -0.5
CTDSPL2-208ENST00000559793 SLC4A5Q9BY07 1137 aa11.9□□□□□ -0.5
CTDSPL2-208ENST00000559793 COL9A1P20849 921 aa11.89□□□□□ -0.51
CTDSPL2-208ENST00000559793 TSR1Q2NL82 804 aaKnown RBP11.89□□□□□ -0.51
CTDSPL2-208ENST00000559793 ADGRD1Q6QNK2 874 aa11.89□□□□□ -0.51
CTDSPL2-208ENST00000559793 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
CTDSPL2-208ENST00000559793 A0A0G2JS52 829 aa11.88□□□□□ -0.51
CTDSPL2-208ENST00000559793 TESPA1A2RU30 521 aaPredicted RBP11.88□□□□□ -0.51
CTDSPL2-208ENST00000559793 BAG6P46379 1132 aa11.88□□□□□ -0.51
CTDSPL2-208ENST00000559793 MYT1Q01538 1121 aa11.88□□□□□ -0.51
CTDSPL2-208ENST00000559793 FAM182BQ5T319 152 aa11.88□□□□□ -0.51
CTDSPL2-208ENST00000559793 ZBED2Q9BTP6 218 aa11.88□□□□□ -0.51
CTDSPL2-208ENST00000559793 TRAK1Q9UPV9 953 aa11.88□□□□□ -0.51
CTDSPL2-208ENST00000559793 PRR36Q9H6K5 1346 aa11.87□□□□□ -0.51
CTDSPL2-208ENST00000559793 ANKARQ7Z5J8 1434 aa11.87□□□□□ -0.51
CTDSPL2-208ENST00000559793 NRAPQ86VF7 1730 aa11.87□□□□□ -0.51
CTDSPL2-208ENST00000559793 TRPM3Q9HCF6 1732 aaPredicted RBP11.87□□□□□ -0.51
CTDSPL2-208ENST00000559793 HRCP23327 699 aa11.87□□□□□ -0.51
CTDSPL2-208ENST00000559793 VPS9D1Q9Y2B5 631 aa11.87□□□□□ -0.51
CTDSPL2-208ENST00000559793 MINK1Q8N4C8 1332 aaPredicted RBP11.86□□□□□ -0.51
CTDSPL2-208ENST00000559793 DLC1Q96QB1 1528 aa11.86□□□□□ -0.51
CTDSPL2-208ENST00000559793 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
CTDSPL2-208ENST00000559793 LRP5O75197 1615 aa11.86□□□□□ -0.51
CTDSPL2-208ENST00000559793 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
CTDSPL2-208ENST00000559793 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
CTDSPL2-208ENST00000559793 ACIN1Q9UKV3 1341 aaKnown RBP11.86□□□□□ -0.51
CTDSPL2-208ENST00000559793 ALS2Q96Q42 1657 aa11.85□□□□□ -0.51
CTDSPL2-208ENST00000559793 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
CTDSPL2-208ENST00000559793 WASLO00401 505 aaPredicted RBP11.85□□□□□ -0.51
CTDSPL2-208ENST00000559793 SLC24A1O60721 1099 aa11.85□□□□□ -0.51
CTDSPL2-208ENST00000559793 COL14A1Q05707 1796 aaKnown RBP11.84□□□□□ -0.51
CTDSPL2-208ENST00000559793 HRO43593 1189 aa11.84□□□□□ -0.51
CTDSPL2-208ENST00000559793 MMRN1Q13201 1228 aa11.84□□□□□ -0.51
CTDSPL2-208ENST00000559793 NGDNQ8NEJ9 315 aaKnown RBP11.84□□□□□ -0.51
CTDSPL2-208ENST00000559793 ADGRB1O14514 1584 aa11.84□□□□□ -0.51
CTDSPL2-208ENST00000559793 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
CTDSPL2-208ENST00000559793 R3HDM1Q15032 1099 aaKnown RBP11.83□□□□□ -0.52
CTDSPL2-208ENST00000559793 EZH2Q15910 746 aaKnown RBP11.82□□□□□ -0.52
CTDSPL2-208ENST00000559793 DCAF11Q8TEB1 546 aa11.82□□□□□ -0.52
CTDSPL2-208ENST00000559793 RGPD1P0DJD0 1748 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 CRYBG1Q9Y4K1 1723 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 PROX2Q3B8N5 592 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 SMYD5Q6GMV2 418 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 CAMKK2Q96RR4 588 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 CDHR5Q9HBB8 845 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 PRDM11Q9NQV5 511 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 SPATA31A1Q5TZJ5 1347 aa11.81□□□□□ -0.52
CTDSPL2-208ENST00000559793 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
CTDSPL2-208ENST00000559793 NUDT16Q96DE0 195 aaKnown RBP11.8□□□□□ -0.52
CTDSPL2-208ENST00000559793 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
CTDSPL2-208ENST00000559793 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
CTDSPL2-208ENST00000559793 THSD7AQ9UPZ6 1657 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms