RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 ZNF827Q17R98 1081 aa26.33■■□□□ 1.81
CDC42BPB-206ENST00000559790 NBPF6Q5VWK0 638 aa26.33■■□□□ 1.81
CDC42BPB-206ENST00000559790 NBPF4Q96M43 638 aa26.33■■□□□ 1.81
CDC42BPB-206ENST00000559790 SGIP1Q9BQI5 828 aa26.33■■□□□ 1.81
CDC42BPB-206ENST00000559790 C5P01031 1676 aa26.32■■□□□ 1.8
CDC42BPB-206ENST00000559790 ZBTB7AO95365 584 aa26.32■■□□□ 1.8
CDC42BPB-206ENST00000559790 AMPHP49418 695 aa26.32■■□□□ 1.8
CDC42BPB-206ENST00000559790 CLSPNQ9HAW4 1339 aa26.32■■□□□ 1.8
CDC42BPB-206ENST00000559790 INSRP06213 1382 aa26.32■■□□□ 1.8
CDC42BPB-206ENST00000559790 STK32BQ9NY57 414 aa26.3■■□□□ 1.8
CDC42BPB-206ENST00000559790 FLT4P35916 1363 aa26.3■■□□□ 1.8
CDC42BPB-206ENST00000559790 USHBP1Q8N6Y0 703 aa26.29■■□□□ 1.8
CDC42BPB-206ENST00000559790 DDX54Q8TDD1 881 aaKnown RBP26.29■■□□□ 1.8
CDC42BPB-206ENST00000559790 TIMELESSQ9UNS1 1208 aa26.29■■□□□ 1.8
CDC42BPB-206ENST00000559790 KIF24Q5T7B8 1368 aa26.29■■□□□ 1.8
CDC42BPB-206ENST00000559790 HSP90AB2PQ58FF8 381 aa26.27■■□□□ 1.8
CDC42BPB-206ENST00000559790 CHD4Q14839 1912 aa26.26■■□□□ 1.79
CDC42BPB-206ENST00000559790 AKT1S1Q96B36 256 aa26.25■■□□□ 1.79
CDC42BPB-206ENST00000559790 SMG6Q86US8 1419 aaKnown RBP26.24■■□□□ 1.79
CDC42BPB-206ENST00000559790 CDCA8Q53HL2 280 aa26.24■■□□□ 1.79
CDC42BPB-206ENST00000559790 ZCRB1Q8TBF4 217 aaKnown RBP26.24■■□□□ 1.79
CDC42BPB-206ENST00000559790 PPP1R1BQ9UD71 204 aaPredicted RBP26.24■■□□□ 1.79
CDC42BPB-206ENST00000559790 ATF5Q9Y2D1 282 aaPredicted RBP26.24■■□□□ 1.79
CDC42BPB-206ENST00000559790 EMILIN1Q9Y6C2 1016 aa26.24■■□□□ 1.79
CDC42BPB-206ENST00000559790 PRIM1P49642 420 aaKnown RBP26.22■■□□□ 1.79
CDC42BPB-206ENST00000559790 KCNQ4P56696 695 aa26.21■■□□□ 1.79
CDC42BPB-206ENST00000559790 MTFR1LQ9H019 292 aa26.21■■□□□ 1.79
CDC42BPB-206ENST00000559790 UBR3Q6ZT12 1888 aa26.21■■□□□ 1.79
CDC42BPB-206ENST00000559790 UTRNP46939 3433 aa26.2■■□□□ 1.78
CDC42BPB-206ENST00000559790 PNPLA7Q6ZV29 1317 aa26.19■■□□□ 1.78
CDC42BPB-206ENST00000559790 CGNL1Q0VF96 1302 aa26.18■■□□□ 1.78
CDC42BPB-206ENST00000559790 SLC27A3Q5K4L6 730 aa26.18■■□□□ 1.78
CDC42BPB-206ENST00000559790 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
CDC42BPB-206ENST00000559790 FHDC1Q9C0D6 1143 aaPredicted RBP26.16■■□□□ 1.78
CDC42BPB-206ENST00000559790 MAP3K5Q99683 1374 aa26.16■■□□□ 1.78
CDC42BPB-206ENST00000559790 C4BP0C0L5 1744 aa26.16■■□□□ 1.78
CDC42BPB-206ENST00000559790 CYP27B1O15528 508 aa26.15■■□□□ 1.78
CDC42BPB-206ENST00000559790 SYTL4Q96C24 671 aaPredicted RBP26.14■■□□□ 1.78
CDC42BPB-206ENST00000559790 RAPGEF4Q8WZA2 1011 aa26.13■■□□□ 1.77
CDC42BPB-206ENST00000559790 PCDH11XQ9BZA7 1347 aa26.13■■□□□ 1.77
CDC42BPB-206ENST00000559790 PCDH11YQ9BZA8 1340 aa26.13■■□□□ 1.77
CDC42BPB-206ENST00000559790 SYT17Q9BSW7 474 aa26.12■■□□□ 1.77
CDC42BPB-206ENST00000559790 WASHC2AQ641Q2 1341 aa26.12■■□□□ 1.77
CDC42BPB-206ENST00000559790 TATP17735 454 aaPredicted RBP26.11■■□□□ 1.77
CDC42BPB-206ENST00000559790 HSPA5P11021 654 aaKnown RBP26.1■■□□□ 1.77
CDC42BPB-206ENST00000559790 POLKQ9UBT6 870 aa26.09■■□□□ 1.77
CDC42BPB-206ENST00000559790 VIRMAQ69YN4 1812 aaKnown RBP26.09■■□□□ 1.77
CDC42BPB-206ENST00000559790 GOLGB1Q14789 3259 aaKnown RBP26.07■■□□□ 1.76
CDC42BPB-206ENST00000559790 YY1P25490 414 aa26.07■■□□□ 1.76
CDC42BPB-206ENST00000559790 ARXQ96QS3 562 aa26.06■■□□□ 1.76
CDC42BPB-206ENST00000559790 EYA1Q99502 592 aa26.06■■□□□ 1.76
CDC42BPB-206ENST00000559790 CCNL1Q9UK58 526 aaPredicted RBP26.06■■□□□ 1.76
CDC42BPB-206ENST00000559790 PALLDQ8WX93 1383 aa26.06■■□□□ 1.76
CDC42BPB-206ENST00000559790 COL5A3P25940 1745 aaPredicted RBP26.05■■□□□ 1.76
CDC42BPB-206ENST00000559790 ZNF831Q5JPB2 1677 aa26.05■■□□□ 1.76
CDC42BPB-206ENST00000559790 NKX1-1Q15270 411 aaPredicted RBP26.03■■□□□ 1.76
CDC42BPB-206ENST00000559790 SLC16A10Q8TF71 515 aa26.03■■□□□ 1.76
CDC42BPB-206ENST00000559790 EIF4G2P78344 907 aaKnown RBP eCLIP26.02■■□□□ 1.76
CDC42BPB-206ENST00000559790 PPM1GO15355 546 aaPredicted RBP26.01■■□□□ 1.75
CDC42BPB-206ENST00000559790 EIF4A2Q14240 407 aaKnown RBP26.01■■□□□ 1.75
CDC42BPB-206ENST00000559790 AMIGO3Q86WK7 504 aa26.01■■□□□ 1.75
CDC42BPB-206ENST00000559790 COL23A1Q86Y22 540 aaPredicted RBP26■■□□□ 1.75
CDC42BPB-206ENST00000559790 TFCP2L1Q9NZI6 479 aa26■■□□□ 1.75
CDC42BPB-206ENST00000559790 PLEKHG2Q9H7P9 1386 aa25.99■■□□□ 1.75
CDC42BPB-206ENST00000559790 IGSF1Q8N6C5 1336 aa25.99■■□□□ 1.75
CDC42BPB-206ENST00000559790 SCN11AQ9UI33 1791 aa25.98■■□□□ 1.75
CDC42BPB-206ENST00000559790 MYH14Q7Z406 1995 aaKnown RBP25.97■■□□□ 1.75
CDC42BPB-206ENST00000559790 MPRIPQ6WCQ1 1025 aa25.97■■□□□ 1.75
CDC42BPB-206ENST00000559790 PIGBQ92521 554 aa25.97■■□□□ 1.75
CDC42BPB-206ENST00000559790 POLR3GLQ9BT43 218 aa25.97■■□□□ 1.75
CDC42BPB-206ENST00000559790 PANK3Q9H999 370 aa25.97■■□□□ 1.75
CDC42BPB-206ENST00000559790 TNNT2P45379 298 aaPredicted RBP25.96■■□□□ 1.75
CDC42BPB-206ENST00000559790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.96■■□□□ 1.75
CDC42BPB-206ENST00000559790 CICQ96RK0 1608 aaPredicted RBP25.96■■□□□ 1.75
CDC42BPB-206ENST00000559790 C4AP0C0L4 1744 aa25.95■■□□□ 1.74
CDC42BPB-206ENST00000559790 KIAA1551Q9HCM1 1747 aa25.95■■□□□ 1.74
CDC42BPB-206ENST00000559790 KDRP35968 1356 aa25.95■■□□□ 1.74
CDC42BPB-206ENST00000559790 KDM6AO15550 1401 aaPredicted RBP25.94■■□□□ 1.74
CDC42BPB-206ENST00000559790 KIF13BQ9NQT8 1826 aa25.93■■□□□ 1.74
CDC42BPB-206ENST00000559790 PHKG2P15735 406 aa25.93■■□□□ 1.74
CDC42BPB-206ENST00000559790 NLGN2Q8NFZ4 835 aa25.93■■□□□ 1.74
CDC42BPB-206ENST00000559790 TJP1Q07157 1748 aa25.92■■□□□ 1.74
CDC42BPB-206ENST00000559790 CCER1Q8TC90 406 aaPredicted RBP25.92■■□□□ 1.74
CDC42BPB-206ENST00000559790 SPG7Q9UQ90 795 aa25.92■■□□□ 1.74
CDC42BPB-206ENST00000559790 SMIM5Q71RC9 77 aa25.9■■□□□ 1.74
CDC42BPB-206ENST00000559790 DCAF8L1A6NGE4 600 aa25.89■■□□□ 1.74
CDC42BPB-206ENST00000559790 MSL1Q68DK7 614 aa25.89■■□□□ 1.74
CDC42BPB-206ENST00000559790 ADAMTS7Q9UKP4 1686 aa25.88■■□□□ 1.73
CDC42BPB-206ENST00000559790 POLD1P28340 1107 aa25.88■■□□□ 1.73
CDC42BPB-206ENST00000559790 LINC00116Q8NCU8 138 aa25.88■■□□□ 1.73
CDC42BPB-206ENST00000559790 ASAP1Q9ULH1 1129 aa25.88■■□□□ 1.73
CDC42BPB-206ENST00000559790 ITPK1Q13572 414 aa25.87■■□□□ 1.73
CDC42BPB-206ENST00000559790 SMARCC1Q92922 1105 aaPredicted RBP25.87■■□□□ 1.73
CDC42BPB-206ENST00000559790 KIF7Q2M1P5 1343 aa25.87■■□□□ 1.73
CDC42BPB-206ENST00000559790 AEBP1Q8IUX7 1158 aa25.86■■□□□ 1.73
CDC42BPB-206ENST00000559790 ZNF784Q8NCA9 323 aaPredicted RBP25.86■■□□□ 1.73
CDC42BPB-206ENST00000559790 LOC102724428A0A0B4J2F2 783 aa25.85■■□□□ 1.73
CDC42BPB-206ENST00000559790 SIK1P57059 783 aa25.85■■□□□ 1.73
CDC42BPB-206ENST00000559790 AMER1Q5JTC6 1135 aaPredicted RBP25.85■■□□□ 1.73
CDC42BPB-206ENST00000559790 IFNL2Q8IZJ0 200 aa25.85■■□□□ 1.73
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