RNA–Protein interactions for RNA: ENST00000559757.1

RNF111-208, Transcript of ring finger protein 111, humanhuman

TSL 4

Gene RNF111, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-208ENST00000559757 SHANK3Q9BYB0 1731 aa23.12■■□□□ 1.29
RNF111-208ENST00000559757 NPC1L1Q9UHC9 1359 aa23.12■■□□□ 1.29
RNF111-208ENST00000559757 DDX54Q8TDD1 881 aaKnown RBP23.11■■□□□ 1.29
RNF111-208ENST00000559757 KAT6BQ8WYB5 2073 aa23.11■■□□□ 1.29
RNF111-208ENST00000559757 PLSCR1O15162 318 aa23.1■■□□□ 1.29
RNF111-208ENST00000559757 EIF4A2Q14240 407 aaKnown RBP23.08■■□□□ 1.29
RNF111-208ENST00000559757 EYA1Q99502 592 aa23.08■■□□□ 1.29
RNF111-208ENST00000559757 NUP188Q5SRE5 1749 aa23.08■■□□□ 1.28
RNF111-208ENST00000559757 CC2D1BQ5T0F9 858 aaKnown RBP23.07■■□□□ 1.28
RNF111-208ENST00000559757 PKD1L3Q7Z443 1732 aa23.07■■□□□ 1.28
RNF111-208ENST00000559757 PCDH11XQ9BZA7 1347 aa23.07■■□□□ 1.28
RNF111-208ENST00000559757 PCDH11YQ9BZA8 1340 aa23.07■■□□□ 1.28
RNF111-208ENST00000559757 ACSBG1Q96GR2 724 aa23.06■■□□□ 1.28
RNF111-208ENST00000559757 DOT1LQ8TEK3 1739 aa23.05■■□□□ 1.28
RNF111-208ENST00000559757 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
RNF111-208ENST00000559757 BTAF1O14981 1849 aa23.04■■□□□ 1.28
RNF111-208ENST00000559757 PTF1AQ7RTS3 328 aa23.04■■□□□ 1.28
RNF111-208ENST00000559757 KCNQ2O43526 872 aa23.03■■□□□ 1.28
RNF111-208ENST00000559757 NBPF14Q5TI25 921 aa23.03■■□□□ 1.28
RNF111-208ENST00000559757 IGSF1Q8N6C5 1336 aa23.03■■□□□ 1.28
RNF111-208ENST00000559757 SPG7Q9UQ90 795 aa23.02■■□□□ 1.28
RNF111-208ENST00000559757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.01■■□□□ 1.27
RNF111-208ENST00000559757 MTHFSP49914 203 aa22.99■■□□□ 1.27
RNF111-208ENST00000559757 SYTL4Q96C24 671 aaPredicted RBP22.98■■□□□ 1.27
RNF111-208ENST00000559757 PSDA5PKW4 1024 aaPredicted RBP22.97■■□□□ 1.27
RNF111-208ENST00000559757 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
RNF111-208ENST00000559757 TXNRD1Q16881 649 aa22.97■■□□□ 1.27
RNF111-208ENST00000559757 PRIM1P49642 420 aaKnown RBP22.96■■□□□ 1.27
RNF111-208ENST00000559757 R3HDM1Q15032 1099 aaKnown RBP22.96■■□□□ 1.27
RNF111-208ENST00000559757 CYP27B1O15528 508 aa22.95■■□□□ 1.26
RNF111-208ENST00000559757 IL13P35225 146 aa22.95■■□□□ 1.26
RNF111-208ENST00000559757 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.26
RNF111-208ENST00000559757 KDRP35968 1356 aa22.93■■□□□ 1.26
RNF111-208ENST00000559757 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
RNF111-208ENST00000559757 PROM2Q8N271 834 aa22.93■■□□□ 1.26
RNF111-208ENST00000559757 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
RNF111-208ENST00000559757 NKX1-1Q15270 411 aaPredicted RBP22.92■■□□□ 1.26
RNF111-208ENST00000559757 AMOTQ4VCS5 1084 aa22.92■■□□□ 1.26
RNF111-208ENST00000559757 PLEKHO1Q53GL0 409 aaPredicted RBP22.91■■□□□ 1.26
RNF111-208ENST00000559757 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
RNF111-208ENST00000559757 ITGB4P16144 1822 aa22.91■■□□□ 1.26
RNF111-208ENST00000559757 LY75O60449 1722 aa22.91■■□□□ 1.26
RNF111-208ENST00000559757 TOGARAM1Q9Y4F4 1720 aa22.91■■□□□ 1.26
RNF111-208ENST00000559757 LRP5O75197 1615 aa22.9■■□□□ 1.26
RNF111-208ENST00000559757 PHKG2P15735 406 aa22.89■■□□□ 1.25
RNF111-208ENST00000559757 SLC27A3Q5K4L6 730 aa22.89■■□□□ 1.25
RNF111-208ENST00000559757 HSP90AB1P08238 724 aaKnown RBP22.88■■□□□ 1.25
RNF111-208ENST00000559757 AEBP1Q8IUX7 1158 aa22.88■■□□□ 1.25
RNF111-208ENST00000559757 CFAP53Q96M91 514 aa22.88■■□□□ 1.25
RNF111-208ENST00000559757 STK32BQ9NY57 414 aa22.88■■□□□ 1.25
RNF111-208ENST00000559757 COL3A1P02461 1466 aaPredicted RBP22.87■■□□□ 1.25
RNF111-208ENST00000559757 PAPPAQ13219 1627 aa22.86■■□□□ 1.25
RNF111-208ENST00000559757 HMGB2P26583 209 aaKnown RBP22.86■■□□□ 1.25
RNF111-208ENST00000559757 ANO8Q9HCE9 1232 aaPredicted RBP22.86■■□□□ 1.25
RNF111-208ENST00000559757 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
RNF111-208ENST00000559757 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
RNF111-208ENST00000559757 ZNF530Q6P9A1 599 aaPredicted RBP22.84■■□□□ 1.25
RNF111-208ENST00000559757 SRCAPQ6ZRS2 3230 aa22.84■■□□□ 1.25
RNF111-208ENST00000559757 PPP2R1AP30153 589 aa22.83■■□□□ 1.25
RNF111-208ENST00000559757 SLC15A2Q16348 729 aa22.83■■□□□ 1.25
RNF111-208ENST00000559757 SMARCC1Q92922 1105 aaPredicted RBP22.83■■□□□ 1.25
RNF111-208ENST00000559757 DCAF5Q96JK2 942 aa22.82■■□□□ 1.24
RNF111-208ENST00000559757 TMOD3Q9NYL9 352 aa22.82■■□□□ 1.24
RNF111-208ENST00000559757 PALLDQ8WX93 1383 aa22.81■■□□□ 1.24
RNF111-208ENST00000559757 HMOX1P09601 288 aa22.81■■□□□ 1.24
RNF111-208ENST00000559757 LRRC4BQ9NT99 713 aa22.81■■□□□ 1.24
RNF111-208ENST00000559757 CCNL1Q9UK58 526 aaPredicted RBP22.81■■□□□ 1.24
RNF111-208ENST00000559757 U2SURPO15042 1029 aaKnown RBP22.8■■□□□ 1.24
RNF111-208ENST00000559757 CASZ1Q86V15 1759 aa22.8■■□□□ 1.24
RNF111-208ENST00000559757 ERVV-2B6SEH9 535 aa22.79■■□□□ 1.24
RNF111-208ENST00000559757 PIGBQ92521 554 aa22.79■■□□□ 1.24
RNF111-208ENST00000559757 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
RNF111-208ENST00000559757 QSER1Q2KHR3 1735 aa22.79■■□□□ 1.24
RNF111-208ENST00000559757 DDX10Q13206 875 aaKnown RBP22.77■■□□□ 1.24
RNF111-208ENST00000559757 AKAP4Q5JQC9 854 aa22.77■■□□□ 1.24
RNF111-208ENST00000559757 C5P01031 1676 aa22.77■■□□□ 1.24
RNF111-208ENST00000559757 SCN11AQ9UI33 1791 aa22.76■■□□□ 1.23
RNF111-208ENST00000559757 KDM6AO15550 1401 aaPredicted RBP22.76■■□□□ 1.23
RNF111-208ENST00000559757 AKT1S1Q96B36 256 aa22.75■■□□□ 1.23
RNF111-208ENST00000559757 SPON1Q9HCB6 807 aa22.75■■□□□ 1.23
RNF111-208ENST00000559757 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
RNF111-208ENST00000559757 ZNF827Q17R98 1081 aa22.74■■□□□ 1.23
RNF111-208ENST00000559757 VIRMAQ69YN4 1812 aaKnown RBP22.73■■□□□ 1.23
RNF111-208ENST00000559757 CABP4P57796 275 aa22.73■■□□□ 1.23
RNF111-208ENST00000559757 RALBP1Q15311 655 aa22.73■■□□□ 1.23
RNF111-208ENST00000559757 KCNQ4P56696 695 aa22.72■■□□□ 1.23
RNF111-208ENST00000559757 MTHFSDQ2M296 383 aaKnown RBP22.71■■□□□ 1.23
RNF111-208ENST00000559757 TFCP2L1Q9NZI6 479 aa22.71■■□□□ 1.23
RNF111-208ENST00000559757 TUBGCP6Q96RT7 1819 aa22.71■■□□□ 1.23
RNF111-208ENST00000559757 GAS2L2Q8NHY3 880 aa22.7■■□□□ 1.22
RNF111-208ENST00000559757 ASAP1Q9ULH1 1129 aa22.7■■□□□ 1.22
RNF111-208ENST00000559757 ZNF831Q5JPB2 1677 aa22.69■■□□□ 1.22
RNF111-208ENST00000559757 LOC102724428A0A0B4J2F2 783 aa22.69■■□□□ 1.22
RNF111-208ENST00000559757 U2AF1L5P0DN76 240 aaPredicted RBP22.69■■□□□ 1.22
RNF111-208ENST00000559757 SIK1P57059 783 aa22.69■■□□□ 1.22
RNF111-208ENST00000559757 U2AF1Q01081 240 aaKnown RBP eCLIP22.69■■□□□ 1.22
RNF111-208ENST00000559757 ATG3Q9NT62 314 aa22.69■■□□□ 1.22
RNF111-208ENST00000559757 ADAMTS7Q9UKP4 1686 aa22.68■■□□□ 1.22
RNF111-208ENST00000559757 PDGFDQ9GZP0 370 aaPredicted RBP22.68■■□□□ 1.22
RNF111-208ENST00000559757 MTFR1LQ9H019 292 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms