RNA–Protein interactions for RNA: ENST00000559560.1

PBX1-216, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-216ENST00000559560 EIF4A2Q14240 407 aaKnown RBP30.61■■■□□ 2.49
PBX1-216ENST00000559560 EZH2Q15910 746 aaKnown RBP30.61■■■□□ 2.49
PBX1-216ENST00000559560 CC2D1BQ5T0F9 858 aaKnown RBP30.61■■■□□ 2.49
PBX1-216ENST00000559560 DDX54Q8TDD1 881 aaKnown RBP30.61■■■□□ 2.49
PBX1-216ENST00000559560 RREB1Q92766 1687 aa30.6■■■□□ 2.49
PBX1-216ENST00000559560 EYA1Q99502 592 aa30.6■■■□□ 2.49
PBX1-216ENST00000559560 PLSCR1O15162 318 aa30.58■■■□□ 2.49
PBX1-216ENST00000559560 PKD1L3Q7Z443 1732 aa30.56■■■□□ 2.48
PBX1-216ENST00000559560 PLEKHG2Q9H7P9 1386 aa30.56■■■□□ 2.48
PBX1-216ENST00000559560 PCDH11XQ9BZA7 1347 aa30.55■■■□□ 2.48
PBX1-216ENST00000559560 PCDH11YQ9BZA8 1340 aa30.55■■■□□ 2.48
PBX1-216ENST00000559560 ZEB1P37275 1124 aaPredicted RBP30.55■■■□□ 2.48
PBX1-216ENST00000559560 IGSF1Q8N6C5 1336 aa30.54■■■□□ 2.48
PBX1-216ENST00000559560 KAT6BQ8WYB5 2073 aa30.53■■■□□ 2.48
PBX1-216ENST00000559560 PTF1AQ7RTS3 328 aa30.53■■■□□ 2.48
PBX1-216ENST00000559560 ACSBG1Q96GR2 724 aa30.53■■■□□ 2.48
PBX1-216ENST00000559560 NUP188Q5SRE5 1749 aa30.53■■■□□ 2.48
PBX1-216ENST00000559560 DOT1LQ8TEK3 1739 aa30.51■■■□□ 2.47
PBX1-216ENST00000559560 KCNQ2O43526 872 aa30.51■■■□□ 2.47
PBX1-216ENST00000559560 MTHFSP49914 203 aa30.5■■■□□ 2.47
PBX1-216ENST00000559560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.5■■■□□ 2.47
PBX1-216ENST00000559560 BTAF1O14981 1849 aa30.5■■■□□ 2.47
PBX1-216ENST00000559560 SPG7Q9UQ90 795 aa30.49■■■□□ 2.47
PBX1-216ENST00000559560 IL13P35225 146 aa30.46■■■□□ 2.47
PBX1-216ENST00000559560 NBPF14Q5TI25 921 aa30.45■■■□□ 2.47
PBX1-216ENST00000559560 CNGB1Q14028 1251 aaPredicted RBP30.44■■■□□ 2.46
PBX1-216ENST00000559560 CYP27B1O15528 508 aa30.43■■■□□ 2.46
PBX1-216ENST00000559560 PRIM1P49642 420 aaKnown RBP30.41■■■□□ 2.46
PBX1-216ENST00000559560 SYTL4Q96C24 671 aaPredicted RBP30.41■■■□□ 2.46
PBX1-216ENST00000559560 KDRP35968 1356 aa30.41■■■□□ 2.46
PBX1-216ENST00000559560 DIAPH1O60610 1272 aaKnown RBP30.39■■■□□ 2.46
PBX1-216ENST00000559560 NKX1-1Q15270 411 aaPredicted RBP30.39■■■□□ 2.46
PBX1-216ENST00000559560 TXNRD1Q16881 649 aa30.39■■■□□ 2.46
PBX1-216ENST00000559560 PSDA5PKW4 1024 aaPredicted RBP30.38■■■□□ 2.45
PBX1-216ENST00000559560 R3HDM1Q15032 1099 aaKnown RBP30.38■■■□□ 2.45
PBX1-216ENST00000559560 PROM2Q8N271 834 aa30.38■■■□□ 2.45
PBX1-216ENST00000559560 AMOTQ4VCS5 1084 aa30.37■■■□□ 2.45
PBX1-216ENST00000559560 PLEKHO1Q53GL0 409 aaPredicted RBP30.37■■■□□ 2.45
PBX1-216ENST00000559560 SULT6B1Q6IMI4 303 aa30.37■■■□□ 2.45
PBX1-216ENST00000559560 IFNL2Q8IZJ0 200 aa30.37■■■□□ 2.45
PBX1-216ENST00000559560 COL3A1P02461 1466 aaPredicted RBP30.37■■■□□ 2.45
PBX1-216ENST00000559560 AEBP1Q8IUX7 1158 aa30.36■■■□□ 2.45
PBX1-216ENST00000559560 TOGARAM1Q9Y4F4 1720 aa30.36■■■□□ 2.45
PBX1-216ENST00000559560 PHKG2P15735 406 aa30.34■■■□□ 2.45
PBX1-216ENST00000559560 CFAP53Q96M91 514 aa30.34■■■□□ 2.45
PBX1-216ENST00000559560 ITGB4P16144 1822 aa30.33■■■□□ 2.45
PBX1-216ENST00000559560 LY75O60449 1722 aa30.31■■■□□ 2.44
PBX1-216ENST00000559560 HSP90AB1P08238 724 aaKnown RBP30.31■■■□□ 2.44
PBX1-216ENST00000559560 SLC27A3Q5K4L6 730 aa30.31■■■□□ 2.44
PBX1-216ENST00000559560 PPP2R1AP30153 589 aa30.3■■■□□ 2.44
PBX1-216ENST00000559560 ZNF530Q6P9A1 599 aaPredicted RBP30.28■■■□□ 2.44
PBX1-216ENST00000559560 PAPPAQ13219 1627 aa30.28■■■□□ 2.44
PBX1-216ENST00000559560 LRP5O75197 1615 aa30.27■■■□□ 2.44
PBX1-216ENST00000559560 MPRIPQ6WCQ1 1025 aa30.27■■■□□ 2.44
PBX1-216ENST00000559560 ANO8Q9HCE9 1232 aaPredicted RBP30.27■■■□□ 2.44
PBX1-216ENST00000559560 STK32BQ9NY57 414 aa30.27■■■□□ 2.44
PBX1-216ENST00000559560 HMOX1P09601 288 aa30.25■■■□□ 2.43
PBX1-216ENST00000559560 C1orf141Q5JVX7 400 aa30.25■■■□□ 2.43
PBX1-216ENST00000559560 DCAF5Q96JK2 942 aa30.25■■■□□ 2.43
PBX1-216ENST00000559560 DDX10Q13206 875 aaKnown RBP30.24■■■□□ 2.43
PBX1-216ENST00000559560 U2SURPO15042 1029 aaKnown RBP30.23■■■□□ 2.43
PBX1-216ENST00000559560 SMARCC1Q92922 1105 aaPredicted RBP30.23■■■□□ 2.43
PBX1-216ENST00000559560 TMOD3Q9NYL9 352 aa30.23■■■□□ 2.43
PBX1-216ENST00000559560 HMGB2P26583 209 aaKnown RBP30.22■■■□□ 2.43
PBX1-216ENST00000559560 SLC15A2Q16348 729 aa30.22■■■□□ 2.43
PBX1-216ENST00000559560 LRRC4BQ9NT99 713 aa30.22■■■□□ 2.43
PBX1-216ENST00000559560 NUDCQ9Y266 331 aa30.22■■■□□ 2.43
PBX1-216ENST00000559560 PALLDQ8WX93 1383 aa30.21■■■□□ 2.43
PBX1-216ENST00000559560 ERVV-2B6SEH9 535 aa30.21■■■□□ 2.43
PBX1-216ENST00000559560 PIGBQ92521 554 aa30.21■■■□□ 2.43
PBX1-216ENST00000559560 CCNL1Q9UK58 526 aaPredicted RBP30.2■■■□□ 2.43
PBX1-216ENST00000559560 RALBP1Q15311 655 aa30.18■■■□□ 2.42
PBX1-216ENST00000559560 KDM6AO15550 1401 aaPredicted RBP30.18■■■□□ 2.42
PBX1-216ENST00000559560 CASZ1Q86V15 1759 aa30.18■■■□□ 2.42
PBX1-216ENST00000559560 AKAP4Q5JQC9 854 aa30.17■■■□□ 2.42
PBX1-216ENST00000559560 SRCAPQ6ZRS2 3230 aa30.15■■■□□ 2.42
PBX1-216ENST00000559560 SCN11AQ9UI33 1791 aa30.15■■■□□ 2.42
PBX1-216ENST00000559560 QSER1Q2KHR3 1735 aa30.14■■■□□ 2.42
PBX1-216ENST00000559560 AKT1S1Q96B36 256 aa30.13■■■□□ 2.41
PBX1-216ENST00000559560 C5P01031 1676 aa30.13■■■□□ 2.41
PBX1-216ENST00000559560 ZNF827Q17R98 1081 aa30.12■■■□□ 2.41
PBX1-216ENST00000559560 CABP4P57796 275 aa30.11■■■□□ 2.41
PBX1-216ENST00000559560 MTHFSDQ2M296 383 aaKnown RBP30.11■■■□□ 2.41
PBX1-216ENST00000559560 TAF1LQ8IZX4 1826 aa30.1■■■□□ 2.41
PBX1-216ENST00000559560 U2AF1L5P0DN76 240 aaPredicted RBP30.1■■■□□ 2.41
PBX1-216ENST00000559560 KCNQ4P56696 695 aa30.1■■■□□ 2.41
PBX1-216ENST00000559560 U2AF1Q01081 240 aaKnown RBP eCLIP30.1■■■□□ 2.41
PBX1-216ENST00000559560 GAS2L2Q8NHY3 880 aa30.1■■■□□ 2.41
PBX1-216ENST00000559560 RSPH6AQ9H0K4 717 aa30.09■■■□□ 2.41
PBX1-216ENST00000559560 VIRMAQ69YN4 1812 aaKnown RBP30.08■■■□□ 2.41
PBX1-216ENST00000559560 SPON1Q9HCB6 807 aa30.08■■■□□ 2.41
PBX1-216ENST00000559560 ASAP1Q9ULH1 1129 aa30.08■■■□□ 2.41
PBX1-216ENST00000559560 ADAMTS7Q9UKP4 1686 aa30.07■■■□□ 2.41
PBX1-216ENST00000559560 ATG3Q9NT62 314 aa30.07■■■□□ 2.4
PBX1-216ENST00000559560 LOC102724428A0A0B4J2F2 783 aa30.06■■■□□ 2.4
PBX1-216ENST00000559560 FCHSD2O94868 740 aa30.06■■■□□ 2.4
PBX1-216ENST00000559560 PRKAR2BP31323 418 aa30.06■■■□□ 2.4
PBX1-216ENST00000559560 SIK1P57059 783 aa30.06■■■□□ 2.4
PBX1-216ENST00000559560 MRC1P22897 1456 aa30.06■■■□□ 2.4
PBX1-216ENST00000559560 TUBGCP6Q96RT7 1819 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms