RNA–Protein interactions for RNA: ENST00000559378.4

HMGN2P47-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 47, humanhuman

BASIC

Gene HMGN2P47, Length 272 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P47-201ENST00000559378 DIS3Q9Y2L1 958 aaKnown RBP7.23□□□□□ -1.25
HMGN2P47-201ENST00000559378 KIF16BQ96L93 1317 aa7.23□□□□□ -1.25
HMGN2P47-201ENST00000559378 PABPN1LA6NDY0 278 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 CCT2P78371 535 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 COL19A1Q14993 1142 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 NOM1Q5C9Z4 860 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 MSL1Q68DK7 614 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 CCDC70Q6NSX1 233 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 KRT77Q7Z794 578 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 POLR3CQ9BUI4 534 aaPredicted RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 PCDH12Q9NPG4 1184 aa7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 CGNQ9P2M7 1197 aaKnown RBP7.22□□□□□ -1.25
HMGN2P47-201ENST00000559378 GOLGA6L22H0YM25 854 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 TRPC1P48995 793 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 DCTN1Q14203 1278 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 FILIP1Q7Z7B0 1213 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 SAMD3Q8N6K7 520 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 GOLGA1Q92805 767 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 NUCKS1Q9H1E3 243 aaKnown RBP7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 PIF1Q9H611 641 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 UTP6Q9NYH9 597 aaKnown RBP7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 ACAD8Q9UKU7 415 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 TBC1D2BQ9UPU7 963 aa7.21□□□□□ -1.26
HMGN2P47-201ENST00000559378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 LDHAP00338 332 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 TPM3P06753 285 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 FAM163BP0C2L3 166 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 NAT2P11245 290 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 FOSL1P15407 271 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 CLK1P49759 484 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 MARSP56192 900 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 WASHC5Q12768 1159 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 ALDH1L2Q3SY69 923 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 MAP9Q49MG5 647 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 LCA5Q86VQ0 697 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 GPIHBP1Q8IV16 184 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 RPUSD2Q8IZ73 545 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 NGDNQ8NEJ9 315 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCDC102AQ96A19 550 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 FMNL2Q96PY5 1086 aa7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 CHCHD3Q9NX63 227 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 DDX56Q9NY93 547 aaKnown RBP7.2□□□□□ -1.26
HMGN2P47-201ENST00000559378 ERICH4A6NGS2 130 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 TRIM64CA6NLI5 447 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 RECKO95980 971 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 U2AF1L5P0DN76 240 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 U2AF1Q01081 240 aaKnown RBP eCLIP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 BMS1Q14692 1282 aaKnown RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 NFE2L2Q16236 605 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 CT47A1Q5JQC4 288 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 MFSD4BQ5TF39 518 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 IQCEQ6IPM2 695 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 C16orf87Q6PH81 154 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 EP400NLQ6ZTU2 488 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 OTUD6AQ7L8S5 288 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 TTC30AQ86WT1 665 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 IQCF2Q8IXL9 164 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 CHCHD4Q8N4Q1 142 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 PAF1Q8N7H5 531 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 MNS1Q8NEH6 495 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 STAG1Q8WVM7 1258 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 DHX38Q92620 1227 aaKnown RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 ERCC4Q92889 916 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 NCAPGQ9BPX3 1015 aa7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 ALDH8A1Q9H2A2 487 aaPredicted RBP7.19□□□□□ -1.26
HMGN2P47-201ENST00000559378 VIL1P09327 827 aaKnown RBP7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCDC175P0C221 793 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 SETSIPP0DME0 302 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 E2F5Q15329 346 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCDC89Q8N998 374 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 PPM1EQ8WY54 764 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 TTC14Q96N46 770 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CEP89Q96ST8 783 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 PNNQ9H307 717 aaKnown RBP7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 IFT57Q9NWB7 429 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 ZNF652Q9Y2D9 606 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 CHMP3Q9Y3E7 222 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 PAXBP1Q9Y5B6 917 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 IL16Q14005 1332 aa7.18□□□□□ -1.26
HMGN2P47-201ENST00000559378 STK25O00506 426 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 TPPPO94811 219 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 USP5P45974 858 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 ZNF132P52740 706 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 E2F4Q16254 413 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 LONRF1Q17RB8 773 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 ZNF394Q53GI3 561 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 SLF2Q8IX21 1173 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 FRS2Q8WU20 508 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 JDP2Q8WYK2 163 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 AGAP3Q96P47 875 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 AVENQ9NQS1 362 aaPredicted RBP7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 DONSONQ9NYP3 566 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 KNSTRNQ9Y448 316 aa7.17□□□□□ -1.26
HMGN2P47-201ENST00000559378 IFRD1O00458 451 aaPredicted RBP7.16□□□□□ -1.26
HMGN2P47-201ENST00000559378 CCP110O43303 1012 aa7.16□□□□□ -1.26
HMGN2P47-201ENST00000559378 PPFIA3O75145 1194 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms