RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 WDR17Q8IZU2 1322 aa21.25■□□□□ 0.99
PBX1-215ENST00000559240 AEBP1Q8IUX7 1158 aa21.25■□□□□ 0.99
PBX1-215ENST00000559240 LRRC37A3O60309 1634 aa21.24■□□□□ 0.99
PBX1-215ENST00000559240 IL16Q14005 1332 aa21.23■□□□□ 0.99
PBX1-215ENST00000559240 HAP1P54257 671 aaPredicted RBP21.23■□□□□ 0.99
PBX1-215ENST00000559240 AAMPQ13685 434 aa21.23■□□□□ 0.99
PBX1-215ENST00000559240 WWC1Q8IX03 1113 aa21.23■□□□□ 0.99
PBX1-215ENST00000559240 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.23■□□□□ 0.99
PBX1-215ENST00000559240 ADAMTS7Q9UKP4 1686 aa21.23■□□□□ 0.99
PBX1-215ENST00000559240 TRMT2AQ8IZ69 625 aaKnown RBP21.22■□□□□ 0.99
PBX1-215ENST00000559240 PHACTR3Q96KR7 559 aa21.22■□□□□ 0.99
PBX1-215ENST00000559240 BCL11BQ9C0K0 894 aaPredicted RBP21.22■□□□□ 0.99
PBX1-215ENST00000559240 WNK3Q9BYP7 1800 aa21.22■□□□□ 0.99
PBX1-215ENST00000559240 FAM83GA6ND36 823 aa21.22■□□□□ 0.99
PBX1-215ENST00000559240 LMOD3Q0VAK6 560 aa21.22■□□□□ 0.99
PBX1-215ENST00000559240 SLIT2O94813 1529 aa21.22■□□□□ 0.99
PBX1-215ENST00000559240 PDIA4P13667 645 aaKnown RBP21.21■□□□□ 0.99
PBX1-215ENST00000559240 TRIM35Q9UPQ4 493 aa21.21■□□□□ 0.99
PBX1-215ENST00000559240 HTATSF1O43719 755 aaKnown RBP21.2■□□□□ 0.98
PBX1-215ENST00000559240 CHRNA2Q15822 529 aa21.2■□□□□ 0.98
PBX1-215ENST00000559240 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
PBX1-215ENST00000559240 GOLGA2Q08379 1002 aa21.19■□□□□ 0.98
PBX1-215ENST00000559240 CRB1P82279 1406 aa21.19■□□□□ 0.98
PBX1-215ENST00000559240 ZBTB7CA1YPR0 619 aa21.19■□□□□ 0.98
PBX1-215ENST00000559240 LTV1Q96GA3 475 aaPredicted RBP21.19■□□□□ 0.98
PBX1-215ENST00000559240 OVOS2A0A0G2JMS6 1433 aa21.19■□□□□ 0.98
PBX1-215ENST00000559240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.19■□□□□ 0.98
PBX1-215ENST00000559240 CARD10Q9BWT7 1032 aa21.18■□□□□ 0.98
PBX1-215ENST00000559240 AMOTQ4VCS5 1084 aa21.18■□□□□ 0.98
PBX1-215ENST00000559240 RIPK4P57078 832 aa21.17■□□□□ 0.98
PBX1-215ENST00000559240 SLFN5Q08AF3 891 aa21.17■□□□□ 0.98
PBX1-215ENST00000559240 E9PSI1 815 aa21.17■□□□□ 0.98
PBX1-215ENST00000559240 CALD1Q05682 793 aaKnown RBP21.16■□□□□ 0.98
PBX1-215ENST00000559240 LRP6O75581 1613 aa21.15■□□□□ 0.98
PBX1-215ENST00000559240 MEGF6O75095 1541 aa21.14■□□□□ 0.97
PBX1-215ENST00000559240 HSPA1LP34931 641 aa21.14■□□□□ 0.97
PBX1-215ENST00000559240 MTHFSDQ2M296 383 aaKnown RBP21.14■□□□□ 0.97
PBX1-215ENST00000559240 RRP7AQ9Y3A4 280 aaKnown RBP21.13■□□□□ 0.97
PBX1-215ENST00000559240 DISP2A7MBM2 1401 aa21.13■□□□□ 0.97
PBX1-215ENST00000559240 SHANK3Q9BYB0 1731 aa21.13■□□□□ 0.97
PBX1-215ENST00000559240 MAP3K5Q99683 1374 aa21.12■□□□□ 0.97
PBX1-215ENST00000559240 PLEKHO1Q53GL0 409 aaPredicted RBP21.12■□□□□ 0.97
PBX1-215ENST00000559240 VIRMAQ69YN4 1812 aaKnown RBP21.12■□□□□ 0.97
PBX1-215ENST00000559240 DUSP27Q5VZP5 1158 aa21.12■□□□□ 0.97
PBX1-215ENST00000559240 NLRP2Q9NX02 1062 aa21.12■□□□□ 0.97
PBX1-215ENST00000559240 CSB-PGBD3P0DP91 1061 aa21.11■□□□□ 0.97
PBX1-215ENST00000559240 USHBP1Q8N6Y0 703 aa21.11■□□□□ 0.97
PBX1-215ENST00000559240 BTG4Q9NY30 223 aa21.11■□□□□ 0.97
PBX1-215ENST00000559240 ZBTB47Q9UFB7 747 aaPredicted RBP21.09■□□□□ 0.97
PBX1-215ENST00000559240 CEMIPQ8WUJ3 1361 aa21.09■□□□□ 0.97
PBX1-215ENST00000559240 SIPA1L3O60292 1781 aaPredicted RBP21.09■□□□□ 0.97
PBX1-215ENST00000559240 ZNF853P0CG23 659 aa21.09■□□□□ 0.97
PBX1-215ENST00000559240 TATP17735 454 aaPredicted RBP21.09■□□□□ 0.97
PBX1-215ENST00000559240 FNBP4Q8N3X1 1017 aaPredicted RBP21.09■□□□□ 0.97
PBX1-215ENST00000559240 RAPGEF4Q8WZA2 1011 aa21.09■□□□□ 0.97
PBX1-215ENST00000559240 CDCA7LQ96GN5 454 aa21.09■□□□□ 0.97
PBX1-215ENST00000559240 SCN11AQ9UI33 1791 aa21.09■□□□□ 0.97
PBX1-215ENST00000559240 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
PBX1-215ENST00000559240 MYH16Q9H6N6 1097 aa21.08■□□□□ 0.97
PBX1-215ENST00000559240 THRAP3Q9Y2W1 955 aaKnown RBP21.08■□□□□ 0.97
PBX1-215ENST00000559240 NEUROD2Q15784 382 aa21.08■□□□□ 0.96
PBX1-215ENST00000559240 TOM1L2Q6ZVM7 507 aa21.08■□□□□ 0.96
PBX1-215ENST00000559240 IFT57Q9NWB7 429 aa21.08■□□□□ 0.96
PBX1-215ENST00000559240 GNAT3A8MTJ3 354 aa21.07■□□□□ 0.96
PBX1-215ENST00000559240 EVA1CP58658 441 aa21.07■□□□□ 0.96
PBX1-215ENST00000559240 LARP1Q6PKG0 1096 aaKnown RBP21.07■□□□□ 0.96
PBX1-215ENST00000559240 BABAM1Q9NWV8 329 aa21.07■□□□□ 0.96
PBX1-215ENST00000559240 LAS1LQ9Y4W2 734 aaKnown RBP21.07■□□□□ 0.96
PBX1-215ENST00000559240 MRC1P22897 1456 aa21.06■□□□□ 0.96
PBX1-215ENST00000559240 BCL9LQ86UU0 1499 aa21.06■□□□□ 0.96
PBX1-215ENST00000559240 SPINK5Q9NQ38 1064 aaPredicted RBP21.06■□□□□ 0.96
PBX1-215ENST00000559240 SPG7Q9UQ90 795 aa21.06■□□□□ 0.96
PBX1-215ENST00000559240 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
PBX1-215ENST00000559240 CDCA7Q9BWT1 371 aaPredicted RBP21.05■□□□□ 0.96
PBX1-215ENST00000559240 IPO9Q96P70 1041 aaKnown RBP21.04■□□□□ 0.96
PBX1-215ENST00000559240 IL2RBP14784 551 aa21.04■□□□□ 0.96
PBX1-215ENST00000559240 GNAI1P63096 354 aa21.04■□□□□ 0.96
PBX1-215ENST00000559240 CFAP44Q96MT7 982 aa21.04■□□□□ 0.96
PBX1-215ENST00000559240 KDM3BQ7LBC6 1761 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 SPATA31A1Q5TZJ5 1347 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 RNF123Q5XPI4 1314 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 SENP3-EIF4A1A0A087X0R7 540 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 ADAMTS2O95450 1211 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 SPATA31A5Q5VU36 1347 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 SPATA31A7Q8IWB4 1347 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 UNC5CLQ8IV45 518 aa21.03■□□□□ 0.96
PBX1-215ENST00000559240 RTF1Q92541 710 aaKnown RBP21.03■□□□□ 0.96
PBX1-215ENST00000559240 NUTM2BA6NNL0 878 aaPredicted RBP21.02■□□□□ 0.96
PBX1-215ENST00000559240 NUTM2EB1AL46 878 aaPredicted RBP21.02■□□□□ 0.96
PBX1-215ENST00000559240 NUTM2AQ8IVF1 878 aaPredicted RBP21.02■□□□□ 0.96
PBX1-215ENST00000559240 STRN4Q9NRL3 753 aa21.02■□□□□ 0.95
PBX1-215ENST00000559240 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
PBX1-215ENST00000559240 BARGINQ6ZT62 677 aa21.01■□□□□ 0.95
PBX1-215ENST00000559240 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
PBX1-215ENST00000559240 VPS72Q15906 364 aa21.01■□□□□ 0.95
PBX1-215ENST00000559240 PCDH11XQ9BZA7 1347 aa21■□□□□ 0.95
PBX1-215ENST00000559240 PCDH11YQ9BZA8 1340 aa21■□□□□ 0.95
PBX1-215ENST00000559240 CHL1O00533 1208 aa21■□□□□ 0.95
PBX1-215ENST00000559240 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
PBX1-215ENST00000559240 NKX1-1Q15270 411 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms