RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 SENP3-EIF4A1A0A087X0R7 540 aa17.29■□□□□ 0.36
TRPM1-210ENST00000559179 RAPGEF4Q8WZA2 1011 aa17.29■□□□□ 0.36
TRPM1-210ENST00000559179 CCNL1Q9UK58 526 aaPredicted RBP17.29■□□□□ 0.36
TRPM1-210ENST00000559179 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
TRPM1-210ENST00000559179 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
TRPM1-210ENST00000559179 PNPLA7Q6ZV29 1317 aa17.27■□□□□ 0.36
TRPM1-210ENST00000559179 RRS1Q15050 365 aaKnown RBP17.27■□□□□ 0.36
TRPM1-210ENST00000559179 USHBP1Q8N6Y0 703 aa17.27■□□□□ 0.36
TRPM1-210ENST00000559179 USP47Q96K76 1375 aa17.27■□□□□ 0.35
TRPM1-210ENST00000559179 TATP17735 454 aaPredicted RBP17.26■□□□□ 0.35
TRPM1-210ENST00000559179 GGNBP2Q9H3C7 697 aa17.26■□□□□ 0.35
TRPM1-210ENST00000559179 SMG6Q86US8 1419 aaKnown RBP17.26■□□□□ 0.35
TRPM1-210ENST00000559179 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
TRPM1-210ENST00000559179 TMF1P82094 1093 aa17.25■□□□□ 0.35
TRPM1-210ENST00000559179 MAP3K5Q99683 1374 aa17.25■□□□□ 0.35
TRPM1-210ENST00000559179 RGPD2P0DJD1 1756 aa17.25■□□□□ 0.35
TRPM1-210ENST00000559179 NBPF6Q5VWK0 638 aa17.24■□□□□ 0.35
TRPM1-210ENST00000559179 NBPF4Q96M43 638 aa17.24■□□□□ 0.35
TRPM1-210ENST00000559179 TESK2Q96S53 571 aa17.24■□□□□ 0.35
TRPM1-210ENST00000559179 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
TRPM1-210ENST00000559179 MSL1Q68DK7 614 aa17.22■□□□□ 0.35
TRPM1-210ENST00000559179 NLGN2Q8NFZ4 835 aa17.22■□□□□ 0.35
TRPM1-210ENST00000559179 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
TRPM1-210ENST00000559179 MEGF6O75095 1541 aa17.21■□□□□ 0.35
TRPM1-210ENST00000559179 QSER1Q2KHR3 1735 aa17.21■□□□□ 0.35
TRPM1-210ENST00000559179 RTL1A6NKG5 1358 aa17.21■□□□□ 0.35
TRPM1-210ENST00000559179 FYB1O15117 783 aa17.21■□□□□ 0.35
TRPM1-210ENST00000559179 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
TRPM1-210ENST00000559179 HMGB2P26583 209 aaKnown RBP17.21■□□□□ 0.35
TRPM1-210ENST00000559179 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
TRPM1-210ENST00000559179 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
TRPM1-210ENST00000559179 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
TRPM1-210ENST00000559179 CDCA8Q53HL2 280 aa17.2■□□□□ 0.34
TRPM1-210ENST00000559179 COL23A1Q86Y22 540 aaPredicted RBP17.2■□□□□ 0.34
TRPM1-210ENST00000559179 LY75O60449 1722 aa17.19■□□□□ 0.34
TRPM1-210ENST00000559179 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
TRPM1-210ENST00000559179 TUBGCP6Q96RT7 1819 aa17.19■□□□□ 0.34
TRPM1-210ENST00000559179 PCDH11XQ9BZA7 1347 aa17.19■□□□□ 0.34
TRPM1-210ENST00000559179 PCDH11YQ9BZA8 1340 aa17.19■□□□□ 0.34
TRPM1-210ENST00000559179 NSD2O96028 1365 aa17.18■□□□□ 0.34
TRPM1-210ENST00000559179 FLAD1Q8NFF5 587 aa17.17■□□□□ 0.34
TRPM1-210ENST00000559179 AK7Q96M32 723 aa17.16■□□□□ 0.34
TRPM1-210ENST00000559179 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
TRPM1-210ENST00000559179 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
TRPM1-210ENST00000559179 INSRP06213 1382 aa17.15■□□□□ 0.34
TRPM1-210ENST00000559179 FLT4P35916 1363 aa17.15■□□□□ 0.34
TRPM1-210ENST00000559179 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
TRPM1-210ENST00000559179 PHF14O94880 888 aa17.14■□□□□ 0.33
TRPM1-210ENST00000559179 YBX3P16989 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRPM1-210ENST00000559179 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
TRPM1-210ENST00000559179 SPG7Q9UQ90 795 aa17.13■□□□□ 0.33
TRPM1-210ENST00000559179 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
TRPM1-210ENST00000559179 C5P01031 1676 aa17.11■□□□□ 0.33
TRPM1-210ENST00000559179 COL24A1Q17RW2 1714 aa17.11■□□□□ 0.33
TRPM1-210ENST00000559179 CD2APQ9Y5K6 639 aa17.11■□□□□ 0.33
TRPM1-210ENST00000559179 CYP27B1O15528 508 aa17.1■□□□□ 0.33
TRPM1-210ENST00000559179 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
TRPM1-210ENST00000559179 EMILIN1Q9Y6C2 1016 aa17.1■□□□□ 0.33
TRPM1-210ENST00000559179 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
TRPM1-210ENST00000559179 NSD3Q9BZ95 1437 aa17.08■□□□□ 0.32
TRPM1-210ENST00000559179 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
TRPM1-210ENST00000559179 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
TRPM1-210ENST00000559179 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.07■□□□□ 0.32
TRPM1-210ENST00000559179 PIGBQ92521 554 aa17.07■□□□□ 0.32
TRPM1-210ENST00000559179 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
TRPM1-210ENST00000559179 ITGB4P16144 1822 aa17.06■□□□□ 0.32
TRPM1-210ENST00000559179 SMIM5Q71RC9 77 aa17.06■□□□□ 0.32
TRPM1-210ENST00000559179 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
TRPM1-210ENST00000559179 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
TRPM1-210ENST00000559179 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
TRPM1-210ENST00000559179 ATP6V1AP38606 617 aa17.05■□□□□ 0.32
TRPM1-210ENST00000559179 TNNT2P45379 298 aaPredicted RBP17.05■□□□□ 0.32
TRPM1-210ENST00000559179 ATP10DQ9P241 1426 aa17.04■□□□□ 0.32
TRPM1-210ENST00000559179 LOC102724428A0A0B4J2F2 783 aa17.04■□□□□ 0.32
TRPM1-210ENST00000559179 SIK1P57059 783 aa17.04■□□□□ 0.32
TRPM1-210ENST00000559179 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
TRPM1-210ENST00000559179 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
TRPM1-210ENST00000559179 GNPATO15228 680 aa17.03■□□□□ 0.32
TRPM1-210ENST00000559179 EYA1Q99502 592 aa17.03■□□□□ 0.32
TRPM1-210ENST00000559179 SSFA2P28290 1259 aa17.02■□□□□ 0.32
TRPM1-210ENST00000559179 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
TRPM1-210ENST00000559179 NKX1-1Q15270 411 aaPredicted RBP17.02■□□□□ 0.32
TRPM1-210ENST00000559179 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.32
TRPM1-210ENST00000559179 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
TRPM1-210ENST00000559179 WASHC2AQ641Q2 1341 aa17.01■□□□□ 0.31
TRPM1-210ENST00000559179 TOGARAM1Q9Y4F4 1720 aa17.01■□□□□ 0.31
TRPM1-210ENST00000559179 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
TRPM1-210ENST00000559179 PHKG2P15735 406 aa17■□□□□ 0.31
TRPM1-210ENST00000559179 PKD1L3Q7Z443 1732 aa17■□□□□ 0.31
TRPM1-210ENST00000559179 AMIGO3Q86WK7 504 aa17■□□□□ 0.31
TRPM1-210ENST00000559179 RBM42Q9BTD8 480 aaKnown RBP17■□□□□ 0.31
TRPM1-210ENST00000559179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
TRPM1-210ENST00000559179 UTRNP46939 3433 aa16.99■□□□□ 0.31
TRPM1-210ENST00000559179 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
TRPM1-210ENST00000559179 POLKQ9UBT6 870 aa16.98■□□□□ 0.31
TRPM1-210ENST00000559179 RTCBQ9Y3I0 505 aaKnown RBP16.98■□□□□ 0.31
TRPM1-210ENST00000559179 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
TRPM1-210ENST00000559179 MMP10P09238 476 aa16.97■□□□□ 0.31
TRPM1-210ENST00000559179 ITPK1Q13572 414 aa16.97■□□□□ 0.31
TRPM1-210ENST00000559179 ATG3Q9NT62 314 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms