RNA–Protein interactions for RNA: ENST00000559162.5

AP3S2-209, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 2

Gene AP3S2, Length 357 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-209ENST00000559162 RAPGEF4Q8WZA2 1011 aa14.4□□□□□ -0.1
AP3S2-209ENST00000559162 NBPF4Q96M43 638 aa14.4□□□□□ -0.1
AP3S2-209ENST00000559162 HSPA5P11021 654 aaKnown RBP14.39□□□□□ -0.11
AP3S2-209ENST00000559162 SLC15A2Q16348 729 aa14.39□□□□□ -0.11
AP3S2-209ENST00000559162 HSP90AB2PQ58FF8 381 aa14.39□□□□□ -0.11
AP3S2-209ENST00000559162 KAT6BQ8WYB5 2073 aa14.38□□□□□ -0.11
AP3S2-209ENST00000559162 NSD2O96028 1365 aa14.38□□□□□ -0.11
AP3S2-209ENST00000559162 TATP17735 454 aaPredicted RBP14.38□□□□□ -0.11
AP3S2-209ENST00000559162 POLR3GLQ9BT43 218 aa14.38□□□□□ -0.11
AP3S2-209ENST00000559162 PPP1R1BQ9UD71 204 aaPredicted RBP14.38□□□□□ -0.11
AP3S2-209ENST00000559162 NCAPD2Q15021 1401 aa14.38□□□□□ -0.11
AP3S2-209ENST00000559162 PCDH11XQ9BZA7 1347 aa14.38□□□□□ -0.11
AP3S2-209ENST00000559162 PCDH11YQ9BZA8 1340 aa14.38□□□□□ -0.11
AP3S2-209ENST00000559162 SLC27A3Q5K4L6 730 aa14.37□□□□□ -0.11
AP3S2-209ENST00000559162 USHBP1Q8N6Y0 703 aa14.37□□□□□ -0.11
AP3S2-209ENST00000559162 EMILIN1Q9Y6C2 1016 aa14.37□□□□□ -0.11
AP3S2-209ENST00000559162 PKD1L3Q7Z443 1732 aa14.37□□□□□ -0.11
AP3S2-209ENST00000559162 SYTL4Q96C24 671 aaPredicted RBP14.36□□□□□ -0.11
AP3S2-209ENST00000559162 WASHC2AQ641Q2 1341 aa14.36□□□□□ -0.11
AP3S2-209ENST00000559162 LY75O60449 1722 aa14.35□□□□□ -0.11
AP3S2-209ENST00000559162 MAP2P11137 1827 aaKnown RBP14.35□□□□□ -0.11
AP3S2-209ENST00000559162 QSER1Q2KHR3 1735 aa14.35□□□□□ -0.11
AP3S2-209ENST00000559162 PLEKHG2Q9H7P9 1386 aa14.34□□□□□ -0.11
AP3S2-209ENST00000559162 PPM1GO15355 546 aaPredicted RBP14.34□□□□□ -0.11
AP3S2-209ENST00000559162 PRIM1P49642 420 aaKnown RBP14.34□□□□□ -0.11
AP3S2-209ENST00000559162 MTFR1LQ9H019 292 aa14.33□□□□□ -0.12
AP3S2-209ENST00000559162 ZBTB7AO95365 584 aa14.32□□□□□ -0.12
AP3S2-209ENST00000559162 PANK3Q9H999 370 aa14.32□□□□□ -0.12
AP3S2-209ENST00000559162 POLKQ9UBT6 870 aa14.32□□□□□ -0.12
AP3S2-209ENST00000559162 HMGB2P26583 209 aaKnown RBP14.31□□□□□ -0.12
AP3S2-209ENST00000559162 PDGFDQ9GZP0 370 aaPredicted RBP14.31□□□□□ -0.12
AP3S2-209ENST00000559162 LRRC4BQ9NT99 713 aa14.31□□□□□ -0.12
AP3S2-209ENST00000559162 ZNF827Q17R98 1081 aa14.3□□□□□ -0.12
AP3S2-209ENST00000559162 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
AP3S2-209ENST00000559162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.3□□□□□ -0.12
AP3S2-209ENST00000559162 SPG7Q9UQ90 795 aa14.3□□□□□ -0.12
AP3S2-209ENST00000559162 TOGARAM1Q9Y4F4 1720 aa14.29□□□□□ -0.12
AP3S2-209ENST00000559162 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
AP3S2-209ENST00000559162 PTGER2P43116 358 aa14.29□□□□□ -0.12
AP3S2-209ENST00000559162 CCNL1Q9UK58 526 aaPredicted RBP14.29□□□□□ -0.12
AP3S2-209ENST00000559162 CYP27B1O15528 508 aa14.28□□□□□ -0.12
AP3S2-209ENST00000559162 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
AP3S2-209ENST00000559162 SLC16A10Q8TF71 515 aa14.28□□□□□ -0.12
AP3S2-209ENST00000559162 EYA1Q99502 592 aa14.28□□□□□ -0.12
AP3S2-209ENST00000559162 KNSTRNQ9Y448 316 aa14.28□□□□□ -0.12
AP3S2-209ENST00000559162 TUBGCP6Q96RT7 1819 aa14.27□□□□□ -0.12
AP3S2-209ENST00000559162 C5P01031 1676 aa14.27□□□□□ -0.12
AP3S2-209ENST00000559162 PALLDQ8WX93 1383 aa14.27□□□□□ -0.12
AP3S2-209ENST00000559162 EIF4A2Q14240 407 aaKnown RBP14.27□□□□□ -0.13
AP3S2-209ENST00000559162 ATF5Q9Y2D1 282 aaPredicted RBP14.27□□□□□ -0.13
AP3S2-209ENST00000559162 ITGB4P16144 1822 aa14.27□□□□□ -0.13
AP3S2-209ENST00000559162 PNPLA7Q6ZV29 1317 aa14.26□□□□□ -0.13
AP3S2-209ENST00000559162 IGSF1Q8N6C5 1336 aa14.26□□□□□ -0.13
AP3S2-209ENST00000559162 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
AP3S2-209ENST00000559162 MORC1Q86VD1 984 aa14.26□□□□□ -0.13
AP3S2-209ENST00000559162 SMARCC1Q92922 1105 aaPredicted RBP14.26□□□□□ -0.13
AP3S2-209ENST00000559162 SGIP1Q9BQI5 828 aa14.26□□□□□ -0.13
AP3S2-209ENST00000559162 TFCP2L1Q9NZI6 479 aa14.26□□□□□ -0.13
AP3S2-209ENST00000559162 MAP3K5Q99683 1374 aa14.25□□□□□ -0.13
AP3S2-209ENST00000559162 KIF7Q2M1P5 1343 aa14.25□□□□□ -0.13
AP3S2-209ENST00000559162 COL24A1Q17RW2 1714 aa14.25□□□□□ -0.13
AP3S2-209ENST00000559162 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
AP3S2-209ENST00000559162 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
AP3S2-209ENST00000559162 TAF1LQ8IZX4 1826 aa14.23□□□□□ -0.13
AP3S2-209ENST00000559162 ARXQ96QS3 562 aa14.23□□□□□ -0.13
AP3S2-209ENST00000559162 PHKG2P15735 406 aa14.22□□□□□ -0.13
AP3S2-209ENST00000559162 POLD1P28340 1107 aa14.22□□□□□ -0.13
AP3S2-209ENST00000559162 KCNQ4P56696 695 aa14.22□□□□□ -0.13
AP3S2-209ENST00000559162 FHDC1Q9C0D6 1143 aaPredicted RBP14.22□□□□□ -0.13
AP3S2-209ENST00000559162 TMOD3Q9NYL9 352 aa14.22□□□□□ -0.13
AP3S2-209ENST00000559162 HSP90AB1P08238 724 aaKnown RBP14.21□□□□□ -0.13
AP3S2-209ENST00000559162 AMER1Q5JTC6 1135 aaPredicted RBP14.21□□□□□ -0.13
AP3S2-209ENST00000559162 SYT17Q9BSW7 474 aa14.21□□□□□ -0.13
AP3S2-209ENST00000559162 C4BP0C0L5 1744 aa14.21□□□□□ -0.14
AP3S2-209ENST00000559162 AMOTQ4VCS5 1084 aa14.2□□□□□ -0.14
AP3S2-209ENST00000559162 FLAD1Q8NFF5 587 aa14.2□□□□□ -0.14
AP3S2-209ENST00000559162 PIGBQ92521 554 aa14.2□□□□□ -0.14
AP3S2-209ENST00000559162 KDRP35968 1356 aa14.2□□□□□ -0.14
AP3S2-209ENST00000559162 PLEKHO1Q53GL0 409 aaPredicted RBP14.19□□□□□ -0.14
AP3S2-209ENST00000559162 DCAF5Q96JK2 942 aa14.18□□□□□ -0.14
AP3S2-209ENST00000559162 LOC102724428A0A0B4J2F2 783 aa14.17□□□□□ -0.14
AP3S2-209ENST00000559162 YY1P25490 414 aa14.17□□□□□ -0.14
AP3S2-209ENST00000559162 SIK1P57059 783 aa14.17□□□□□ -0.14
AP3S2-209ENST00000559162 AK7Q96M32 723 aa14.17□□□□□ -0.14
AP3S2-209ENST00000559162 NPC1L1Q9UHC9 1359 aa14.17□□□□□ -0.14
AP3S2-209ENST00000559162 ZNF831Q5JPB2 1677 aa14.17□□□□□ -0.14
AP3S2-209ENST00000559162 ERVV-2B6SEH9 535 aa14.16□□□□□ -0.14
AP3S2-209ENST00000559162 MSH5O43196 834 aa14.16□□□□□ -0.14
AP3S2-209ENST00000559162 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
AP3S2-209ENST00000559162 COL23A1Q86Y22 540 aaPredicted RBP14.16□□□□□ -0.14
AP3S2-209ENST00000559162 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
AP3S2-209ENST00000559162 KDM6AO15550 1401 aaPredicted RBP14.15□□□□□ -0.14
AP3S2-209ENST00000559162 PER1O15534 1290 aaPredicted RBP14.15□□□□□ -0.14
AP3S2-209ENST00000559162 IL13P35225 146 aa14.15□□□□□ -0.14
AP3S2-209ENST00000559162 C1orf141Q5JVX7 400 aa14.15□□□□□ -0.14
AP3S2-209ENST00000559162 SULT6B1Q6IMI4 303 aa14.15□□□□□ -0.14
AP3S2-209ENST00000559162 AEBP1Q8IUX7 1158 aa14.15□□□□□ -0.14
AP3S2-209ENST00000559162 SSFA2P28290 1259 aa14.14□□□□□ -0.15
AP3S2-209ENST00000559162 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
AP3S2-209ENST00000559162 KLHL34Q8N239 644 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms