RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 CRB1P82279 1406 aa14.24□□□□□ -0.13
CLPX-204ENST00000559152 PSME1Q06323 249 aa14.23□□□□□ -0.13
CLPX-204ENST00000559152 GCC1Q96CN9 775 aa14.23□□□□□ -0.13
CLPX-204ENST00000559152 PTPRCP08575 1304 aa14.23□□□□□ -0.13
CLPX-204ENST00000559152 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
CLPX-204ENST00000559152 C14orf37Q86TY3 774 aa14.22□□□□□ -0.13
CLPX-204ENST00000559152 VIRMAQ69YN4 1812 aaKnown RBP14.22□□□□□ -0.13
CLPX-204ENST00000559152 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
CLPX-204ENST00000559152 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.13
CLPX-204ENST00000559152 GNAT3A8MTJ3 354 aa14.21□□□□□ -0.14
CLPX-204ENST00000559152 NUCB1Q02818 461 aa14.21□□□□□ -0.14
CLPX-204ENST00000559152 NUTM2GQ5VZR2 741 aa14.21□□□□□ -0.14
CLPX-204ENST00000559152 INTS3Q68E01 1043 aaKnown RBP14.21□□□□□ -0.14
CLPX-204ENST00000559152 IP6K1Q92551 441 aa14.21□□□□□ -0.14
CLPX-204ENST00000559152 TSPYL4Q9UJ04 414 aa14.21□□□□□ -0.14
CLPX-204ENST00000559152 MARF1Q9Y4F3 1742 aaKnown RBP14.19□□□□□ -0.14
CLPX-204ENST00000559152 NWD1Q149M9 1564 aa14.19□□□□□ -0.14
CLPX-204ENST00000559152 LMTK3Q96Q04 1460 aa14.19□□□□□ -0.14
CLPX-204ENST00000559152 CHD1LQ86WJ1 897 aa14.18□□□□□ -0.14
CLPX-204ENST00000559152 FOXO3O43524 673 aa14.18□□□□□ -0.14
CLPX-204ENST00000559152 MAP3K5Q99683 1374 aa14.17□□□□□ -0.14
CLPX-204ENST00000559152 RTL5Q5HYW3 569 aaPredicted RBP14.17□□□□□ -0.14
CLPX-204ENST00000559152 BECN1Q14457 450 aa14.16□□□□□ -0.14
CLPX-204ENST00000559152 USP35Q9P2H5 1018 aa14.16□□□□□ -0.14
CLPX-204ENST00000559152 NFAT5O94916 1531 aa14.16□□□□□ -0.14
CLPX-204ENST00000559152 USP19O94966 1318 aa14.15□□□□□ -0.14
CLPX-204ENST00000559152 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
CLPX-204ENST00000559152 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
CLPX-204ENST00000559152 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
CLPX-204ENST00000559152 STK31Q9BXU1 1019 aa14.15□□□□□ -0.14
CLPX-204ENST00000559152 CHMP4AQ9BY43 222 aa14.15□□□□□ -0.14
CLPX-204ENST00000559152 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
CLPX-204ENST00000559152 RPAP2Q8IXW5 612 aaPredicted RBP14.15□□□□□ -0.14
CLPX-204ENST00000559152 TAF7Q15545 349 aaPredicted RBP14.14□□□□□ -0.15
CLPX-204ENST00000559152 KRT24Q2M2I5 525 aa14.14□□□□□ -0.15
CLPX-204ENST00000559152 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
CLPX-204ENST00000559152 PHRF1Q9P1Y6 1649 aaKnown RBP14.14□□□□□ -0.15
CLPX-204ENST00000559152 SEC24BO95487 1268 aa14.14□□□□□ -0.15
CLPX-204ENST00000559152 CCDC30Q5VVM6 783 aa14.14□□□□□ -0.15
CLPX-204ENST00000559152 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
CLPX-204ENST00000559152 EIF5BO60841 1220 aaKnown RBP14.13□□□□□ -0.15
CLPX-204ENST00000559152 CCT4P50991 539 aaKnown RBP14.13□□□□□ -0.15
CLPX-204ENST00000559152 NBR1Q14596 966 aa14.13□□□□□ -0.15
CLPX-204ENST00000559152 ANKRD45Q5TZF3 282 aa14.13□□□□□ -0.15
CLPX-204ENST00000559152 TBC1D32Q96NH3 1257 aa14.13□□□□□ -0.15
CLPX-204ENST00000559152 MIS18AQ9NYP9 233 aa14.13□□□□□ -0.15
CLPX-204ENST00000559152 RGS12O14924 1447 aa14.13□□□□□ -0.15
CLPX-204ENST00000559152 LNPKQ9C0E8 428 aa14.13□□□□□ -0.15
CLPX-204ENST00000559152 C1orf115Q9H7X2 142 aa14.13□□□□□ -0.15
CLPX-204ENST00000559152 LTN1O94822 1766 aa14.12□□□□□ -0.15
CLPX-204ENST00000559152 BMP2KLQ5H9B9 411 aa14.12□□□□□ -0.15
CLPX-204ENST00000559152 ORAI2Q96SN7 254 aa14.12□□□□□ -0.15
CLPX-204ENST00000559152 KIF1AQ12756 1690 aa14.12□□□□□ -0.15
CLPX-204ENST00000559152 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
CLPX-204ENST00000559152 SLIT3O75094 1523 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 GCP02774 474 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 SIRT2Q8IXJ6 389 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 IL17REQ8NFR9 667 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 AMOTQ4VCS5 1084 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 ARHGEF25Q86VW2 580 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 ANKRD44Q8N8A2 993 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 DCTPP1Q9H773 170 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 MSH6P52701 1360 aa14.11□□□□□ -0.15
CLPX-204ENST00000559152 MST1RQ04912 1400 aa14.1□□□□□ -0.15
CLPX-204ENST00000559152 PLEKHO1Q53GL0 409 aaPredicted RBP14.1□□□□□ -0.15
CLPX-204ENST00000559152 NBPF6Q5VWK0 638 aa14.1□□□□□ -0.15
CLPX-204ENST00000559152 KRT28Q7Z3Y7 464 aa14.1□□□□□ -0.15
CLPX-204ENST00000559152 NBPF4Q96M43 638 aa14.1□□□□□ -0.15
CLPX-204ENST00000559152 STRCQ7RTU9 1775 aa14.1□□□□□ -0.15
CLPX-204ENST00000559152 C1orf167Q5SNV9 1468 aa14.1□□□□□ -0.15
CLPX-204ENST00000559152 CEMIPQ8WUJ3 1361 aa14.09□□□□□ -0.15
CLPX-204ENST00000559152 HMMRO75330 724 aa14.09□□□□□ -0.15
CLPX-204ENST00000559152 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
CLPX-204ENST00000559152 ATF3P18847 181 aa14.09□□□□□ -0.15
CLPX-204ENST00000559152 DCCP43146 1447 aa14.08□□□□□ -0.15
CLPX-204ENST00000559152 HOXB7P09629 217 aa14.08□□□□□ -0.16
CLPX-204ENST00000559152 AKAP4Q5JQC9 854 aa14.08□□□□□ -0.16
CLPX-204ENST00000559152 USHBP1Q8N6Y0 703 aa14.08□□□□□ -0.16
CLPX-204ENST00000559152 C22orf23Q9BZE7 217 aa14.08□□□□□ -0.16
CLPX-204ENST00000559152 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
CLPX-204ENST00000559152 CEP85Q6P2H3 762 aa14.07□□□□□ -0.16
CLPX-204ENST00000559152 ZBTB7CA1YPR0 619 aa14.07□□□□□ -0.16
CLPX-204ENST00000559152 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
CLPX-204ENST00000559152 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
CLPX-204ENST00000559152 FLIIQ13045 1269 aa14.06□□□□□ -0.16
CLPX-204ENST00000559152 LMOD2Q6P5Q4 547 aa14.06□□□□□ -0.16
CLPX-204ENST00000559152 GNAI3P08754 354 aa14.06□□□□□ -0.16
CLPX-204ENST00000559152 OVOS2A0A0G2JMS6 1433 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 MFAP1P55081 439 aaKnown RBP14.05□□□□□ -0.16
CLPX-204ENST00000559152 FKBP5Q13451 457 aaPredicted RBP14.05□□□□□ -0.16
CLPX-204ENST00000559152 C1orf141Q5JVX7 400 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 SLC4A10Q6U841 1118 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 G2E3Q7L622 706 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 ANKRD24Q8TF21 1146 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 MEIS3Q99687 375 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
CLPX-204ENST00000559152 GNAI2P04899 355 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 XPCQ01831 940 aaPredicted RBP14.05□□□□□ -0.16
CLPX-204ENST00000559152 TEFQ10587 303 aa14.05□□□□□ -0.16
CLPX-204ENST00000559152 HDGFL1Q5TGJ6 251 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms